Basic Information

Insect: Hydrotaea cyrtoneurina
Gene Symbol: -
Assembly: GCA_958296145.1
Location: OY282512.1:11363291-11368234[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.65 44 5.3 0.0 1 23 146 169 146 169 0.96

2 14 0.0028 0.19 12.8 3.6 2 23 218 240 214 240 0.94

3 14 0.003 0.2 12.7 0.5 1 23 375 398 375 398 0.93

4 14 0.32 22 6.3 1.5 3 23 449 470 447 471 0.91

5 14 0.00018 0.012 16.6 0.2 1 23 530 553 530 553 0.89

6 14 0.00033 0.022 15.7 2.9 2 23 604 626 604 626 0.98

7 14 0.0031 0.21 12.6 4.0 1 23 730 753 730 753 0.97

8 14 0.00021 0.014 16.3 0.6 1 23 806 829 806 829 0.98

9 14 5.1 3.4e+02 2.5 0.9 1 16 847 861 847 871 0.78

10 14 0.0015 0.1 13.7 0.9 2 23 879 901 878 901 0.96

11 14 7.3 4.9e+02 2.0 1.9 1 22 984 1005 984 1007 0.90

12 14 0.54 36 5.6 1.9 1 20 1059 1078 1059 1080 0.94

13 14 0.0095 0.64 11.1 0.0 2 23 1161 1183 1160 1183 0.95

14 14 0.99 66 4.8 4.6 2 23 1233 1255 1232 1255 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.65	44	5.3	0.0	1	23	146	169	146	169	0.96
2	14	0.0028	0.19	12.8	3.6	2	23	218	240	214	240	0.94
3	14	0.003	0.2	12.7	0.5	1	23	375	398	375	398	0.93
4	14	0.32	22	6.3	1.5	3	23	449	470	447	471	0.91
5	14	0.00018	0.012	16.6	0.2	1	23	530	553	530	553	0.89
6	14	0.00033	0.022	15.7	2.9	2	23	604	626	604	626	0.98
7	14	0.0031	0.21	12.6	4.0	1	23	730	753	730	753	0.97
8	14	0.00021	0.014	16.3	0.6	1	23	806	829	806	829	0.98
9	14	5.1	3.4e+02	2.5	0.9	1	16	847	861	847	871	0.78
10	14	0.0015	0.1	13.7	0.9	2	23	879	901	878	901	0.96
11	14	7.3	4.9e+02	2.0	1.9	1	22	984	1005	984	1007	0.90
12	14	0.54	36	5.6	1.9	1	20	1059	1078	1059	1080	0.94
13	14	0.0095	0.64	11.1	0.0	2	23	1161	1183	1160	1183	0.95
14	14	0.99	66	4.8	4.6	2	23	1233	1255	1232	1255	0.94

Sequence Information

Coding Sequence: ATGGATGAATTAGAGCCTTGGAATATGTTCACCAACGACTTTGAGCCAGACGATGCCGCAACGgccgacgacgatgacgacaatGAAAATAATGGTGACTGCGGAGACAATGAACCCTTCGCCATACCTTCTCCCGTTCAAGACATGCAAGTAAAAGAAGAACCTCCGGAACCTGTAGACGAAATACTCGATGATGACGGGAGTGCGGATAACTCACCTTTCGCTTTCCACTCGATAATGCACGGCGATAAAAGACCGAATGCTGAGGAGGATGATGCTTTATTTGATTTCAGTAGCATGGATAACTCGGGTTCAGCCAACCGAATGTCGGGGTCACACAAAACGCCGCTGCCAAAGCTTACAGGTGAGCTCACTGGCTTGTCACCGGAAGATGAGTACTACAATTCCTTAGTTAAATATGAGGATgcaattgtttacatttgtcCTGCCTGTGGTGCAGAGTACCATGCCCAGGAGAGCTggaaaattcatttgaattccGTTCATCAGTACAACACTAGACGTGGCCTGAACTTTATCCAGTTGGACAAATTATACCACCAGTGTCTCGAATGCCACAAACAAATTGCCATGCACAGCATGGAGAATTTGTTGAAGCACAAATTTACACATCTGCCGTATCGGTGCAGTAAATGCAACGTGTGCAAGCGCCAATACAAATACCGCCAGGATCTAATGGTTCATCTAAGAATGAATCACCGGGATGATTTGATTGCTCTTCTGAAGGAGGAACACAAAAAGAAACAGATATATCCACAAAATCAAACGATTCGCTCGATCTTAAGTAAACCCAGCACGGTTAATTCACCGAATTTGGCATCGCGTCCAAATATCACTATCGGCCAAGTTAAGGAGAATGCTATTGACTTATTTGACAGTAATTCGGATAATATTGAAGTTCGCAACGAATTGATCCATGATGAGGAAGACGATGGAGATAACTCGCTGTCAGGACTACCACCAGCGAAGAGAATTGCCCGTGATTTGCCATCATTTTTAGACGATGCTTCCACAAATGGTTCGGCGGTCAATGAACACCGGGTTTCGGTACGTTCAAACGTTTTGGATGGCATTGATGAGTCGCTCGAAGAATATATATTGTTTTCGTGTCCTCAATGTGGAACAGAGTGTGAAACGCAAGCTCAGTGGCGTCAACACATTGAATTTGTACATGATTTTGGATCGAGGAAGGGATTAAATATAAGAGACATCAATCAAGGGCAAGCTCAATGTATGGAATGCAATCAGACCATAACTGTCAACACAATACGTAATCTTCAATTGCACAAATTTAATCATTTGCCCCACAAAAAATGGATGAATTGTAAATTATGCTTTACGCCATTCAATAGATCTAAAGAGATTGTTAAACATTTGGCGGGCAAACATCATTTGAAAGCCGAAAAGAAGGCCAGCGATAATAACGATGAAGACAGCCAAGAGCCCTTTGGGGCTGAAGATTATGACGATGGTGCCGGAGCGGCCGATACGAAAAAGTTATTGTCCGGTCAGGATCAGAATATGTCCAAGCAGGAAGAGCGTGATGCATTCGAACAGCATATTGATTATTTGTGTCCCCAGTGTGGCACGGAATTTAGCGATAAAAAGTTGTGGCGCAAGCACATGGTGGATGCTCATCAGTTGGGCGATTTAGAGACTTTGAATTTTGAACTTATAAACGATCGCCAGTTGAGGTGTAGAGAATGCGATAAGATTATAACCAATGCCTATGGTATACAGAATGCCCAACAGCATCGCATCACACACATGCAATACAAGTCGTTCGCCAAATGTCGTATATGCCGGAAACAATACACGGATCGCAAAGGTCTGACAAAACACTTAAGGACTTCCCATGGAATTGGTGTGATTAGCAATAGTATGGCATTAGGCAATGTCTCGTCGCCGATACCGAACTTCGGCGGCAGTGGCAACATGAAACCGTTTAAAATGAAGCCTTACAAAACAGCTGCCTATCCCCAAAAGGAAATCGTACGACATAATAACTACACCTATGAAATTTGCTATTTGGAAGAGGAGGACGACACTGATaatgctggtggtggtggtggtagttcTTCCGCATATGACTTCGCCAAAGGCGATGCCCATTTGTATCGCAGATCTTACTCGGGACCCAAAACAAATTTGGAGCAGATAACACGACACAGATGCGTAGATTGTGGATCGATTTTCCCTTCGCACAAGTCGCTGCAACATCACATAAAATCTGAACATGAATTTATAGACTTttcgaaaaattcccccaaactCGATAATCCGAACAACGAAGAACAATCGAATGACACCGATGATCTATTAGTGCCCAGTCGTGATGTGCCCAGTGTTGAGGTAAAGGCGGATGAGCCCGTCAAAATGGAATGTAATTTCATCTATATATGTCCACAATGTGGCGTTGAATTTCGATTGAGACATTTGTGGCGTCGACACATCAATACCGAGCACAATTTCGATAAGCGCGACTCTTTGGACTTTCGTACATTGGATAAGTTTCGTTTTCAATGCAAGACATGTCACGAAGTTGTTCAAAGTTCAAAGTTGAAGGGTCTGCAAGATCACAAATTCCGACACTGTCCGTATCGGCAGTATTTGAAGTGTTTGATTTGTGGTCAAGCCTATAATCATAAGCCTAATATGATAAGTCATCTAAGACAGCGCCATAATATCATTGAAGTGGAGCCGAACCCCAATAATGCCTCATTGGCATTGGAATCATCCGGATATAATAAGAGCCAATCACACAATAATTCGAATTCGGCCAAGGACTATGGCGGAGACAGTGGTCCGTCCAGGCAATCGAAAAATTCGGAGACTAGTGTTAACCCGAACCCTAGCCGCCCTCCCGGCCTGAAGACCGTAGAAGACGTCATTTCATTTCACAACGCTGTCGACCATGAAAGCATCACCTATCACTGTCCTTCGTGTACAGATACCTTCGATTCGCACGTATTTTGGCGCAAACACATTGTCGACGAACACAATCTCAACAGCAGGGAAGGTTTGAATTTCCGCCAGCTGGACGATCATCATTATATTTGTTTGCAGTGCTACAAACGTGTCACTGTCACACACACTAAAGGAGCAATTGGCCAATTACAGTCGCATAAATTCCGCCATTTACCATACAAGTCATTCCATTGTACCGTCTGTCGCGGTGAATTTGTGCGTAAGCAAATGTTTTTCAAGCATCTGGACAAGATAACCAATAAATGCAGTGGTATAAATAATGAGTTTACTAAAACGGATTCCGACTTTATAGATCCGCAACAGCTGGATGATGAAACAAATTTGCGAAATGCCGACAATGACAATAGTGCTGCAGCTACCGATGATGCAACAAACGAATCCGCGAAATATGTTTGGCCCACACGGGCTTCGTTGCCGGCTCAACCCACTTCCAATGAATCGGTGTCCGAAAATCAAGGCTGTTTCACACTAAGCTGCCCCCAATGCGGCATTGAGTTTGACACCACACGCGGTTGGCGCGAACACATCAATATTGAACACAATCTGAATAGTCGTTCGGTTCTGAACTTTAGAAAGATCAATCCCAAATTGCATCTATGTTTGGAGTGTAACGAGCACGTGAACGGCCGCAAACTGCGCGACTTGCAAGTGCACAAATTCAAGCATTTGCCCTACGGCGCCTACCTGCATTGTCGCTACTGCCCCATGAAGTATTTCCATATAAGCAATATGCAAGagcatttgaaaaacaaacatccTCAAATGTTGCAAAAGATGAAAAATGACAACTACGATGACGATACGGCGAATTTGGACGTGGACGATGAGGAGGACAGTCATCATTTTGCCGGCGGTGAGTATGATGAAAGCGTGGCAaatgacgatgatggtgatggtggcggCGACGGTAGTCCTCCCTGTTTAGAAGATATAGTTGACATTGATCTATTAGAAGCTGAGGCAGAAATAGAAGAAGTCGATCCCGATAATGTTGAATCCGATGATCAATACCTTCTGGGCTGA
Protein Sequence: MDELEPWNMFTNDFEPDDAATADDDDDNENNGDCGDNEPFAIPSPVQDMQVKEEPPEPVDEILDDDGSADNSPFAFHSIMHGDKRPNAEEDDALFDFSSMDNSGSANRMSGSHKTPLPKLTGELTGLSPEDEYYNSLVKYEDAIVYICPACGAEYHAQESWKIHLNSVHQYNTRRGLNFIQLDKLYHQCLECHKQIAMHSMENLLKHKFTHLPYRCSKCNVCKRQYKYRQDLMVHLRMNHRDDLIALLKEEHKKKQIYPQNQTIRSILSKPSTVNSPNLASRPNITIGQVKENAIDLFDSNSDNIEVRNELIHDEEDDGDNSLSGLPPAKRIARDLPSFLDDASTNGSAVNEHRVSVRSNVLDGIDESLEEYILFSCPQCGTECETQAQWRQHIEFVHDFGSRKGLNIRDINQGQAQCMECNQTITVNTIRNLQLHKFNHLPHKKWMNCKLCFTPFNRSKEIVKHLAGKHHLKAEKKASDNNDEDSQEPFGAEDYDDGAGAADTKKLLSGQDQNMSKQEERDAFEQHIDYLCPQCGTEFSDKKLWRKHMVDAHQLGDLETLNFELINDRQLRCRECDKIITNAYGIQNAQQHRITHMQYKSFAKCRICRKQYTDRKGLTKHLRTSHGIGVISNSMALGNVSSPIPNFGGSGNMKPFKMKPYKTAAYPQKEIVRHNNYTYEICYLEEEDDTDNAGGGGGSSSAYDFAKGDAHLYRRSYSGPKTNLEQITRHRCVDCGSIFPSHKSLQHHIKSEHEFIDFSKNSPKLDNPNNEEQSNDTDDLLVPSRDVPSVEVKADEPVKMECNFIYICPQCGVEFRLRHLWRRHINTEHNFDKRDSLDFRTLDKFRFQCKTCHEVVQSSKLKGLQDHKFRHCPYRQYLKCLICGQAYNHKPNMISHLRQRHNIIEVEPNPNNASLALESSGYNKSQSHNNSNSAKDYGGDSGPSRQSKNSETSVNPNPSRPPGLKTVEDVISFHNAVDHESITYHCPSCTDTFDSHVFWRKHIVDEHNLNSREGLNFRQLDDHHYICLQCYKRVTVTHTKGAIGQLQSHKFRHLPYKSFHCTVCRGEFVRKQMFFKHLDKITNKCSGINNEFTKTDSDFIDPQQLDDETNLRNADNDNSAAATDDATNESAKYVWPTRASLPAQPTSNESVSENQGCFTLSCPQCGIEFDTTRGWREHINIEHNLNSRSVLNFRKINPKLHLCLECNEHVNGRKLRDLQVHKFKHLPYGAYLHCRYCPMKYFHISNMQEHLKNKHPQMLQKMKNDNYDDDTANLDVDDEEDSHHFAGGEYDESVANDDDGDGGGDGSPPCLEDIVDIDLLEAEAEIEEVDPDNVESDDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231987;
90% Identity: -
80% Identity: -