Hcyr009334.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hydrotaea cyrtoneurina
Gene Symbol
RREB1
Assembly
GCA_958296145.1
Location
OY282513.1:70969867-70975722[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.002 0.13 13.2 0.9 1 21 220 240 220 242 0.96
2 13 0.00049 0.033 15.2 0.2 1 23 252 274 252 274 0.98
3 13 3.4e-05 0.0023 18.8 7.5 1 23 280 302 280 302 0.98
4 13 0.46 31 5.8 2.6 2 19 559 576 559 576 0.97
5 13 0.012 0.82 10.8 0.1 1 23 724 746 724 746 0.97
6 13 2.8e-05 0.0019 19.1 1.2 1 23 756 778 756 778 0.99
7 13 0.0012 0.081 13.9 2.0 1 23 784 807 784 807 0.97
8 13 0.0043 0.29 12.2 2.0 1 23 1150 1173 1150 1173 0.95
9 13 0.00013 0.0085 17.0 0.3 2 23 1511 1532 1510 1532 0.97
10 13 0.21 14 6.9 6.3 1 23 1538 1561 1538 1561 0.97
11 13 6.7 4.5e+02 2.2 4.4 1 23 1662 1685 1662 1685 0.96
12 13 0.12 8.3 7.6 1.1 3 23 1738 1758 1737 1758 0.91
13 13 0.0019 0.13 13.3 4.8 1 23 1764 1786 1764 1786 0.99

Sequence Information

Coding Sequence
atGCTGGCCACACCCACACACAATGCCACCGGCGATGCACCCGCCGCCCATGTGAATGCCATCAAAATGGAGAGACGCGATTCGGCCACATCAGAGTCGTCGTTGGAACATTTGGACTTGGGCCGTACGCCCAAAAAACTGAATACAGCCACATCAACGCCGGTCGTGACCAGTGACAAGACCATGACCGCTGTCAGCGGCTTAATGACGGCCGCCGTCGACAGCGCGCGCTACTTGCACCACAAAATGCAAGATTCCGACGAGGCCAACGACTACGATGACGAAGATTCGGCAGACGAGAAGAGCGCGCCCACACCACGCCAACAAATGCATCACAAGCGTCGCCTGGCGGGTCGCAATCAGCTGGATAAACGCACCAGCGTTCACATTGAATACAATGCGGAAAATCCCAATTCGTTGCGTAAGAAGTTCCGTTTCAATCGCAGTTCCGTTGATTACAGCAATGAATCCGGCTTTGTCGATGCCAGCAACAGTCAATTGTTGAACAGCAGCTCAGCGGTGGCGCTGGCCgccaacggcaacaacaacaacatgggcTCGAAATCGAATAGCTCATCGGCCGCCTCAACGCCACCACATCAACAGAGTAATGGCGGCAATTCGAGTGCCGATTCAGCTCCGGGAGAGgatatgaaatatgtctgtcccATCTGTGATGTGGTGTCGGCCACGCCGCACCAGTTCACAAATCACATACGCTGTCACAATTACACCTCAGGGAATACGGAGAATTTCACATGCCGTATTTGCTCAAAGGTACTCTCATCTGCCTCATCACTGGATCGTCACGTTCTGGTGCACACCGGTGAAAGACCATTCAATTGTAAATATTGTCATCTCACTTTTACCACAAATGGCAACATGCACCGACACATGCGCACCCACAAACAGCATCAGTCGACTCATCATCGCCGCAACTCGAATGGAACAAAGTTCAACACCAACaccactaaaacaacaacaacggcagcagcagcaacaacaccgaCGCAATTAAGCAATGGAGGACAATTAAGTGAAGGCGTTAAATTTTCAGCTGAGGCAGCGGCAGTAGCATCGGCTACAGCAATTAGAGCAGCAGCGTTAGATTTGGCGTCAGACAATGATAATCACGATGTGGCATCGGCGATTAATGCATCGTCAACAGGTGCTAATGACAAGCGATTAAATGGTAACGCTGACGCACCAGCCATAGAAAGTTATGAAAGTGATGGCGGCTGCTCCACCGACACCTCAACGGGTCACAacacccacaacaacaacaacaataatgacatgaaaattaacaataataacTACAAACGAAAGCTTAGCGACGACGAACGCGATTATCACGATcaacagcagcaccaccaccaccatcgccatcatcatgaTGTTGTCGAAAGCCACGAAGAGTTGCTGAAACAACATCTGAAGGCAGTCACCAACTCCACTCACGTACACGCCCCTGCCCCTGCCACCAATACCCATACCcataccaccaccaacaacaacaacaacaacgacatcaccCGCGAAGATCACGAGCTATTGTCGGGCGATAAGACAAGCAGCGAATCGTTAATGTGCCCCGTTTGCAACGATGATGAGTTTGCCGATGTCTCGGCTTTGGACCAGCACATGGACGCCAAACACTCCGAAATACCTGCCAAATGCACACATTGTGAGGTTATTTTCCGTTCGCATCACCAGCTCAGCATACATCCTTGCTCAGCGGATGTTAAGCCTCCGGCACACTCCGAACCCATCACTCACCGCCACCGAAGCTTCAGTGAAAGTTCTGTGGGTGCGGCGCCAGACGAAGAACGCGAGAGCAGTGAAGAGCATCGACGACGACAAGAGCTGTTCCATCATTTGGAGTTGAAAAACATGCTCACCCATTCGAATTCCTCCTCATCCCATCACAATGTTGAACTGACCGAAGATGATATCAAATCCGAACCTTCGGCCGGCCACGACTCTAAAGATTTGGCCGATATTCAATCGATTCTGAACATGACGTCGTCATCGAACACTTCAAATTTCCTCAAGAACTTTGAACAGTCCGTTAACACACCCTCCTCACAGTACAGTTACGACAGAGATGAAGAGGAAGCGCAAGACGCTTTCACCGCCGAGTTCCGTAAAATGAAGTTGCGCGGTGAATTCCCCTGCAAACTGTGCACAGCGGTCTTTCCCAATCTCAGAGCGCTCAAAGGTCACAATCGTGTCCATTTGAGTGAAGTGGGTCCGGCCGGTCCATTCCGTTGCAACATGTGCCCCTATTCGATATGTGATAAGGCTGCTCTGGTGCGTCATATGCGCACGCACAACGGTGACAGACCATACGAGTGTGCCGTGTGCAATTATGCCTTCACCACCAAAGCCAACTGTGAGCGTCACTTGCGCAATCGCCATGCCAAAACGTCCAGAGAGGAAGTGAAACGTGCCATTATTTATCATCCCTCAGAAGATTCCAGTTGTGATGATCCAAATAAGAAGCTGCATCTGTTCTCTTCGCCCGAAATGGACGATGACAGCGAATACTATCACCAGCCCCATCCGAAAGATCGATCAACGCCCGTGTCGCACCTCAAGGAGATGTTGACCTCGGGTGACAGCCACTCGGCGAAACCAGTCAAAATCCAAGTAAAGAACCTCAACGAACTGCTCGATAAGTCGTCGGCCTCGTCGGGATACAACGATAGTTACGACAAACGTCATGTGGAATCTTCGGCAGATCCAGTTGACATGAGCATGAATGTTTTGGACTTGAGCAAGAAACCGCCCACTCATACAAAAGCACAAAAAACAGATGAACCCAAAGTGGATGCACCCCTTCCACTCGTCCAGAAGGAGGAGAAGATGCCCTCAGTTGTGGCCAACGGTGGCAATGCCGATGAACTCAAGTCAGATTTAGCGTCACTGgagaaacaacagcaacaatttctCATGGCCCAACAGCCGCAATGGATCAACGATACGGCCCAATATTTGCAGCAATTGTACCGTAATTTACTCTTTCCCCAACTCAATCCATTCCTGATGCCCAACTCACCGTTTATGCCCAACAACATGGCTGAATTTCAGAAACTGGCACCATTCTTCCGATCAATGTTGGGCGCATCTGGTGCTGCACTGCCGGCCGGTGACTTGGACAAAGCTCTCAATCCTACCGCACCATCTACTTTGCCGCCCATAAGCCCCATGATGTCGGAGAAATCGAGTAGCGCCTCCATTGCCTCAATGTCGTCGCCCAAAGGTTTGCTGTCGCCCAACCCCAGCCATCTCAATATTCCCCGGCACGTTGGCAATCCAGCGATGTCATCGCAACCACCCCACTTGCCACCTACCATGATGTCCAATGGGCCCGTAAAAATGGTACTGAAAAACGGTGTCTTTATGCCCAAACAAAAGCAACGACGTTATCGCACCGAACGGCCCTTCGCCTGTGAACATTGCTCGGCTCGCTTTACACTGAGATCGAACATGGAACGCCATGTCAAGCAACAGCACCCCCAGTACTATGCTCAACGTCAACGCAGCGGCCATCATGTGATGCGCGGACGCGGCGCCAGCAGTGCCTCCAACATGAATGGCATAACACATTTGCAAGCGGCCGTTGCACAGGCTCACTATGGTTCCAATACCAGCCCCATGACCAGTCATTCGCCCATTTCGGATCAAGTCAAGTATGCGATTTTAGCTCAACAGCTGAAGGCTCGCAAGGATCCCGATCTGTTGCAGCAGGCTTTGGTGCATGGTTCCAATAGTGTGGCCAACTCCAGTATGTTCGCGGGTCATATGAGTGGACACAGCAATGGCCAACCGGCACATCCGTACTCCAACTATTCGAGTCAACACCTAAGTCAGAATGGCACACCGAACGGTTCGATGGAGGACGATGAGCCCAAACTGGTCATcgatgaagatgatgacgacgacgacgacgaggatGAAGACGATGTTGAGGAAATTCACGATGATCAAGATGACGACTACGATCACGATGACATCCAGTTGATGGAAAAAGACTCACACCACATGGAGGAAAGCCACTTGCCGACCACGGTGGAGGAAGTTAAACTGAAGCCGGAAGAAACAAAAGAGGCAGCCAAAAAGGTAGCTGAATCCATTCTGGAACAGGCCATCAAGGCTGGCCAAAATTTGCCGGCAAAAACGTCGGAAGTGCCAGTGGTCAACTCCAACAACACCATGAAATCCATGATTGCTCAAGCTCCGGCCGTTGGCAAATTCCTCAAAGAAGTTGCCAGCTCCCCCTTCAAAGACGAATCTCAAGACCTAGTGCCGGTATCGAAATTGGTCGATAATGCCACCAGTAACTCTGTCTCGTTCAATAACTATTTCCGCCCTGGAGATGTTGCCAACCACATGGATCACAGCGATGAGGAGGGTTTGGTAGCTTCCGGCAGTGCTAGTGAGAGCAACAACTCTGGCGCCGAAGATGCGGCCAGCAGTGCTCAAACCAAAAAGAAGTCCGCCTACAGTCTGGCACCGAACCGTGTATCCTGCCCCTACTGTCAGCGCATGTTCCCATGGTCCAGTTCTCTCCGACGCCACATTCTCACCCATACCGGCCAGAAGCCATTCAAGTGCTCCCACTGTCCTCTGCTCTTCACCACCAAAAGCAACTGCGATCGTCATCTTTTGCGCAAACATGGCAACGTGGAGTCCGCGGTGTCCGTATACGTGCCCGCCGAAGATGTCAATGAGCCCATACCCTTGCCCAAGTCCGTCGAAGAAATCGAGCGAATGCAAAAGGAACGTGAGGACGAAGAAAAGAAACGTTTGGCCGAAGAACAACGAGAACGTTTGGAAAAAGAACAACGCGAAAAGGAGAAACAGGAGCAGGAGCGACATCAACAACGCCAAGCGATACTCAAGCAGCTGGCCGCGGTACAGTTCAATCAGTTCCAACTTAAGACGGAAACACCGGCCATCTCCTCCTCAGAGTTACCATACAAATGTCATTTGTGCGAGAGTTCGTTTGGCGAACGCACACAGTGTTTGGAGCACATCCGCAGCTATCACGCCCAAGAGTATGACCTACTGCTGTCCAAAGGAGCGGTCGACAGTGAGGCCGATGTAGCACAAATCAATTCCAACGAAGAGGAAGAACGCAATCGATCAAATGAAGAGGGCACCAAAGGGGGCAAATATCCCGATTACAGCAATCGCAAGGTGATCTGTGCCTTTTGCATGCGCCGTTTCTGGTCCACCGAAGATCTGCGCCGGCACATGCGTACGCATTCGGGTGAGAGGCCATTCCAATGCGAAATTTGCCTGCGCAAGTTCACGCTGAAGCACAGTATGCTGCGCCACATGAAGAAACACAATGGCCTGCATCTGAATGGCATGCTACATGGCGGTGACGCCTTGACCAATGGCAACAGCTGCTCGGATTACTCAGACGATGAACAGGGACCGATGCCCGGTCCGCCACCAGCCATCTCAGTACCGAACACCAACATCAACGCCCTGTTTATGGGATCCAAGATTCAGGAGCTGCTCAGCAAGGCCAATGAATGGGGCAGTGGTGGACTGTCGGTGTTGAGAGAGCGCAAACTGAATATGTCCGACGAATCGAGTACACCGCAATCGGACCTGATTGGCAATCTGTTGGGAATCAGCGATCAGGGTATTCTGAATAAACTGATGTCATCGCCAGATGAAGCAGCCAAGCTGTTGGGAGTCGACAAGTAA
Protein Sequence
MLATPTHNATGDAPAAHVNAIKMERRDSATSESSLEHLDLGRTPKKLNTATSTPVVTSDKTMTAVSGLMTAAVDSARYLHHKMQDSDEANDYDDEDSADEKSAPTPRQQMHHKRRLAGRNQLDKRTSVHIEYNAENPNSLRKKFRFNRSSVDYSNESGFVDASNSQLLNSSSAVALAANGNNNNMGSKSNSSSAASTPPHQQSNGGNSSADSAPGEDMKYVCPICDVVSATPHQFTNHIRCHNYTSGNTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQSTHHRRNSNGTKFNTNTTKTTTTAAAATTPTQLSNGGQLSEGVKFSAEAAAVASATAIRAAALDLASDNDNHDVASAINASSTGANDKRLNGNADAPAIESYESDGGCSTDTSTGHNTHNNNNNNDMKINNNNYKRKLSDDERDYHDQQQHHHHHRHHHDVVESHEELLKQHLKAVTNSTHVHAPAPATNTHTHTTTNNNNNNDITREDHELLSGDKTSSESLMCPVCNDDEFADVSALDQHMDAKHSEIPAKCTHCEVIFRSHHQLSIHPCSADVKPPAHSEPITHRHRSFSESSVGAAPDEERESSEEHRRRQELFHHLELKNMLTHSNSSSSHHNVELTEDDIKSEPSAGHDSKDLADIQSILNMTSSSNTSNFLKNFEQSVNTPSSQYSYDRDEEEAQDAFTAEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSEVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTSREEVKRAIIYHPSEDSSCDDPNKKLHLFSSPEMDDDSEYYHQPHPKDRSTPVSHLKEMLTSGDSHSAKPVKIQVKNLNELLDKSSASSGYNDSYDKRHVESSADPVDMSMNVLDLSKKPPTHTKAQKTDEPKVDAPLPLVQKEEKMPSVVANGGNADELKSDLASLEKQQQQFLMAQQPQWINDTAQYLQQLYRNLLFPQLNPFLMPNSPFMPNNMAEFQKLAPFFRSMLGASGAALPAGDLDKALNPTAPSTLPPISPMMSEKSSSASIASMSSPKGLLSPNPSHLNIPRHVGNPAMSSQPPHLPPTMMSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASSASNMNGITHLQAAVAQAHYGSNTSPMTSHSPISDQVKYAILAQQLKARKDPDLLQQALVHGSNSVANSSMFAGHMSGHSNGQPAHPYSNYSSQHLSQNGTPNGSMEDDEPKLVIDEDDDDDDDEDEDDVEEIHDDQDDDYDHDDIQLMEKDSHHMEESHLPTTVEEVKLKPEETKEAAKKVAESILEQAIKAGQNLPAKTSEVPVVNSNNTMKSMIAQAPAVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNSVSFNNYFRPGDVANHMDHSDEEGLVASGSASESNNSGAEDAASSAQTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPAEDVNEPIPLPKSVEEIERMQKEREDEEKKRLAEEQRERLEKEQREKEKQEQERHQQRQAILKQLAAVQFNQFQLKTETPAISSSELPYKCHLCESSFGERTQCLEHIRSYHAQEYDLLLSKGAVDSEADVAQINSNEEEERNRSNEEGTKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGLHLNGMLHGGDALTNGNSCSDYSDDEQGPMPGPPPAISVPNTNINALFMGSKIQELLSKANEWGSGGLSVLRERKLNMSDESSTPQSDLIGNLLGISDQGILNKLMSSPDEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01231843;
90% Identity
-
80% Identity
-