Basic Information

Insect: Hydrotaea cyrtoneurina
Gene Symbol: -
Assembly: GCA_958296145.1
Location: OY282515.1:15116244-15119045[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.002 0.13 13.3 3.6 1 23 259 281 259 281 0.99

2 11 3.7e-06 0.00025 21.8 0.7 1 23 287 309 287 309 0.99

3 11 8.5e-07 5.7e-05 23.8 3.2 1 23 315 338 315 338 0.97

4 11 0.066 4.5 8.5 6.8 1 21 344 364 344 366 0.95

5 11 4.4e-05 0.003 18.5 2.9 1 23 372 394 372 394 0.99

6 11 8.5e-05 0.0057 17.6 2.1 1 23 400 422 400 422 0.98

7 11 0.0004 0.027 15.4 2.2 1 23 430 453 430 453 0.98

8 11 0.00049 0.033 15.2 0.8 1 23 459 481 459 481 0.98

9 11 0.00033 0.022 15.7 1.2 1 23 487 509 487 509 0.98

10 11 2.7e-06 0.00018 22.3 2.5 1 23 515 538 515 538 0.97

11 11 2.7e-07 1.8e-05 25.4 2.7 1 23 552 574 552 574 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.002	0.13	13.3	3.6	1	23	259	281	259	281	0.99
2	11	3.7e-06	0.00025	21.8	0.7	1	23	287	309	287	309	0.99
3	11	8.5e-07	5.7e-05	23.8	3.2	1	23	315	338	315	338	0.97
4	11	0.066	4.5	8.5	6.8	1	21	344	364	344	366	0.95
5	11	4.4e-05	0.003	18.5	2.9	1	23	372	394	372	394	0.99
6	11	8.5e-05	0.0057	17.6	2.1	1	23	400	422	400	422	0.98
7	11	0.0004	0.027	15.4	2.2	1	23	430	453	430	453	0.98
8	11	0.00049	0.033	15.2	0.8	1	23	459	481	459	481	0.98
9	11	0.00033	0.022	15.7	1.2	1	23	487	509	487	509	0.98
10	11	2.7e-06	0.00018	22.3	2.5	1	23	515	538	515	538	0.97
11	11	2.7e-07	1.8e-05	25.4	2.7	1	23	552	574	552	574	0.98

Sequence Information

Coding Sequence: ATGGATGATGCCTCAGATCTTGAGTCATATTTGGATGATTTGGAACAACAAATCGACGAGGACGATGAAATTATTAGCACTTACCAGGAAGACGTTGAAGATAATGCTGCTAGTAagggtgatgatgatgatgatgacatttTGGATGATGCTGAGTTGGAAGACGGCACCATATTCATGGATGCGGAGGGAAATTACTATTATCAGAGTGGTAAAAAAGCGGTACAAGTAAAACCagttaaaaaggaaaaatctATAGCGAAGTCGGTGGCGGCAGCACTCGTTTTGCGGAAAAGGAAAAGATCACAAACTCCTCCACGATCcattaaaaaggaaaaatcgGATACCAGCAGCCTAACTAAACCCAATCCTGCTAAAAAGGCTGGCATTGCAAAAACAGCCAGTACCACTAAAATCTCCAGCTCCACCAAATTAAACAAATCCGCAAAAACAGTCAGCCCCACTAAACCCGGTCCGAGTACTCGCACTAAAACGTTGAATGCTAATATTAAAGTTGAACCATCTTCTACGGATACCAAGCCCATCGTTATCCCCAAAAAGGCAGCAACATCTACGAAAAACGATGTAACCATATCGACGGTCGATGAAACATTCAATtctgaaatggaaaataatgatgAGATCTATAATTTTGACGAAACAGAGCGGAATGTTGATGATCCCGATTATACCGTAGATGATAATGACCCCGACTATGTTCAAAGTGAGGCCGTACTGAAACCCATCGGTTTGGCAGCAGATGCTACGGGTCAATTCAAATGTTCGATCTGCTCGTACAATACGAATAAGAAATTCCTTTTGTCGCGCCATTTAAAAACGCACTCCGAAGAACGACCTTACAAGTGTTCGGTGTGCGAGAGGGGATTCAAAACCAACATCTCTCTGATGAATCACATTAATACTCATTTGGGTAATAAACCGCATCAGTGTGAGGACTGCGAAAAGTCATTTACAACATCCGGTGAACTGACCCGGCACAGACGATACCGCCACACCGGCGTCAAGCCCCACAAATGTACGGAATGTGATTATTGCAGTGTAGAGTTGAGCAAGTTACGGCGTCATATTCGCTGTCATACGGGAGAGCGACCCTATCAATGTCCCCATTGCACATACGCATCACCGGACACGTTTAAACTGAAACGTCACATGCGTACTCATACCGGCGAAAAGCCCTACGAATGTGACATCTGCCATGCCCGATTCACACAATCGAATTCTTTGAAATACCATCGTCTCATACACTCCGTGAATGATAAGCCTGTATTCCAATGTACTCTGTGTCCTACGACATGTGGCCGTAAGACAGATCTGCGTCTACATATACAGAAATTACATAATACGGAGACACCATTTCCATGCAAGCGATGCGGCAAAGAATTGCCCGATCGCTATTCATATAAGATGCATGTGAAGACGCATGAGGGGGAGAAATGTTATCGTTGTACATATTGTCCATACGCCTCAATATCTCAACGTCATTTGGATACGCATATGCTTATACACACTGATTCCAAACCTCATGTCTGTGAACTATGCGACCAAAGTTTCCGTCAAAAGCAGCTTCTCACTCGTCATATGAAAGTCTATCACACCGAGAACTATGAACCACCCGCACCACGAAAGAAGGCCCATGTTTGCCCACATTGTGATCGTTCATTTGCCTTTAAGGGCAATCTGATGCGTCACATGGAAACTCACGATCCAAATTCCACCATAACCGAGgagaaactgaaactgaaattgGGACGCATGCGTCGTGTTCAGTCCGATGGCACTGTTGTTAACCGATCCAAAAATCCCTTCATATACAACGATGAGGAAGTAATGAATGAGGACGACGAGGATGGTTATCTAGATGAAGATGAGGATATCGTATATGATGAAGAGCCCGATGAACACATACAGTATGTGTATGAAGAACAGTTGccagaggaggaggaggagctGGAGCAGGAATATCTAACCGATCAAAAACCAGTGGTTACCGTAAAAACGGAAAACACCACGAACAGGTCTGGTTTGAACATCATACAGAGCACAAGTCCTCTGTACAAAACGGTATCggttaaaaaagaaatggatGGAACTGAATTCATGGCGGTCGAAGTTGAAGATGGCCAGGACTATATGGTTATAGAAGTTATGCAGGAAGGCGAAGAAGAGGGTGAACATCTTGATGATTTAGTGGAGGAAATtaagaaaccaaaaattatagaatgtaaAACTGCAATCCCGGCACCTTCGGTTATAAAAAGTTCATCCATGGCAGCATCATTGAAGGATATTACGGAagattgttttggttttgatGATGATGCCCAGGCCGATGATcttgatgatgacgacgatgaggTTGAACATCAGGATACTCTTGAATTAATGCTTCAAGATGCATAA
Protein Sequence: MDDASDLESYLDDLEQQIDEDDEIISTYQEDVEDNAASKGDDDDDDILDDAELEDGTIFMDAEGNYYYQSGKKAVQVKPVKKEKSIAKSVAAALVLRKRKRSQTPPRSIKKEKSDTSSLTKPNPAKKAGIAKTASTTKISSSTKLNKSAKTVSPTKPGPSTRTKTLNANIKVEPSSTDTKPIVIPKKAATSTKNDVTISTVDETFNSEMENNDEIYNFDETERNVDDPDYTVDDNDPDYVQSEAVLKPIGLAADATGQFKCSICSYNTNKKFLLSRHLKTHSEERPYKCSVCERGFKTNISLMNHINTHLGNKPHQCEDCEKSFTTSGELTRHRRYRHTGVKPHKCTECDYCSVELSKLRRHIRCHTGERPYQCPHCTYASPDTFKLKRHMRTHTGEKPYECDICHARFTQSNSLKYHRLIHSVNDKPVFQCTLCPTTCGRKTDLRLHIQKLHNTETPFPCKRCGKELPDRYSYKMHVKTHEGEKCYRCTYCPYASISQRHLDTHMLIHTDSKPHVCELCDQSFRQKQLLTRHMKVYHTENYEPPAPRKKAHVCPHCDRSFAFKGNLMRHMETHDPNSTITEEKLKLKLGRMRRVQSDGTVVNRSKNPFIYNDEEVMNEDDEDGYLDEDEDIVYDEEPDEHIQYVYEEQLPEEEEELEQEYLTDQKPVVTVKTENTTNRSGLNIIQSTSPLYKTVSVKKEMDGTEFMAVEVEDGQDYMVIEVMQEGEEEGEHLDDLVEEIKKPKIIECKTAIPAPSVIKSSSMAASLKDITEDCFGFDDDAQADDLDDDDDEVEHQDTLELMLQDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00817687;
90% Identity: -
80% Identity: -