Basic Information

Insect: Hydrotaea cyrtoneurina
Gene Symbol: ZNF296
Assembly: GCA_958296145.1
Location: OY282515.1:11410684-11418698[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00022 0.015 16.3 4.5 2 23 371 392 370 392 0.97

2 20 0.022 1.5 9.9 0.2 1 23 398 422 398 422 0.96

3 20 0.0087 0.59 11.2 2.1 1 23 429 454 429 454 0.96

4 20 0.00029 0.02 15.9 1.3 1 23 472 494 472 494 0.97

5 20 0.0025 0.17 12.9 0.9 1 23 502 526 502 526 0.97

6 20 0.001 0.07 14.1 0.3 1 23 532 554 532 554 0.98

7 20 0.0014 0.094 13.7 0.2 1 23 560 583 560 583 0.96

8 20 0.025 1.7 9.8 2.4 1 23 595 617 595 617 0.98

9 20 2e-05 0.0013 19.6 0.0 1 23 623 645 623 645 0.98

10 20 0.00017 0.012 16.6 2.3 1 23 652 674 652 674 0.96

11 20 8e-05 0.0054 17.6 2.8 2 23 696 717 695 717 0.97

12 20 0.00057 0.039 14.9 0.1 1 23 723 745 723 745 0.95

13 20 0.082 5.5 8.2 3.2 1 23 752 777 752 777 0.96

14 20 0.035 2.3 9.3 0.7 1 23 796 818 796 818 0.97

15 20 0.022 1.5 9.9 0.4 1 23 826 850 826 850 0.97

16 20 0.00026 0.017 16.0 0.8 1 23 856 878 856 878 0.98

17 20 0.0001 0.007 17.3 3.9 1 23 884 907 884 907 0.97

18 20 0.98 66 4.8 8.1 1 23 923 945 923 945 0.79

19 20 0.00013 0.009 16.9 0.1 2 23 952 973 952 973 0.98

20 20 0.00043 0.029 15.3 0.4 1 23 980 1002 980 1002 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00022	0.015	16.3	4.5	2	23	371	392	370	392	0.97
2	20	0.022	1.5	9.9	0.2	1	23	398	422	398	422	0.96
3	20	0.0087	0.59	11.2	2.1	1	23	429	454	429	454	0.96
4	20	0.00029	0.02	15.9	1.3	1	23	472	494	472	494	0.97
5	20	0.0025	0.17	12.9	0.9	1	23	502	526	502	526	0.97
6	20	0.001	0.07	14.1	0.3	1	23	532	554	532	554	0.98
7	20	0.0014	0.094	13.7	0.2	1	23	560	583	560	583	0.96
8	20	0.025	1.7	9.8	2.4	1	23	595	617	595	617	0.98
9	20	2e-05	0.0013	19.6	0.0	1	23	623	645	623	645	0.98
10	20	0.00017	0.012	16.6	2.3	1	23	652	674	652	674	0.96
11	20	8e-05	0.0054	17.6	2.8	2	23	696	717	695	717	0.97
12	20	0.00057	0.039	14.9	0.1	1	23	723	745	723	745	0.95
13	20	0.082	5.5	8.2	3.2	1	23	752	777	752	777	0.96
14	20	0.035	2.3	9.3	0.7	1	23	796	818	796	818	0.97
15	20	0.022	1.5	9.9	0.4	1	23	826	850	826	850	0.97
16	20	0.00026	0.017	16.0	0.8	1	23	856	878	856	878	0.98
17	20	0.0001	0.007	17.3	3.9	1	23	884	907	884	907	0.97
18	20	0.98	66	4.8	8.1	1	23	923	945	923	945	0.79
19	20	0.00013	0.009	16.9	0.1	2	23	952	973	952	973	0.98
20	20	0.00043	0.029	15.3	0.4	1	23	980	1002	980	1002	0.96

Sequence Information

Coding Sequence: ATGTCTGATAAAAGAGGTATGGGTCGGGAATTATTCAATAAGAGTTTGATAAAGGAAGTACAAAAATATCAATGTTTGTATGACAACTCACATGCTGATTTTcggaataaaaagaaaagggAGGATTGCTGGTATGAAGTTGGTTGTGCGGTTGGTGAAGCTGCACTTATTTGTAGAAATCGCTGGCAGGATTTACGCAAACAGTATGCAGTACAGTATTCGAAAATGACAACACCGGGAGCTGTCCGGAATTATTATTGGAGGTACACGGATGCAATGTCATTTTTACAAAGTTACGTCGGAAAAAATACaGATTCTCCGAATTCCAttactaatttttcaaaaagagaCCGTTTCTGTCGTACTTGTTTATGCCCTATAATTTCCGATTCCGGTCAAAAGTGTTCTAAGGTCTACAGCATCTTTGATAGTGGGGATTTGGCTGAAAAGTTAACGCAGTGCTCGAACCGCCAAGTTGTACAATGGGACGAGTATCCTCAATCGGTGTGTGAGAAATgttataagaaaattgtctatTTCTCAGAATTCCAACTAATGTGTCAAATGTCTCTCGATAAATTTAATACCATGGTACATGACCCAAACCAAGTAAAATTTGATTTAGATCAGACTATAGACTGCTCTTTAAATAGTCAGATAGAGAGTACAAGTTTAAGTTCGTTATTAAACGAAGAAGACGGGATAGACAACTCATCAACGTTATCCAAAGAATTAAAGATATCCAGTGGTATATCAGAGGATAGAGTGAATTTCATTGAATCTGGTGAAATTGTGGATGATATTATGGAGGAAATCATACAGGTTGAAATTGAAAGAAGCACAGAAGACAGCACCAATAAGAAACCGTGCGAAGAAAATGAGAACATCTCACCGTTTCAGAATCAAGCGGAAGAATTATTTGAAGATGGAAGTGATATTGAAGAGACGACCGAACATGTGAACTTTGAAGATCTGCAATTAGATGATATGCAAAATGAGGATGACGAGGATTATATAGTGGATGAACTAGCCTACACTGATGCACTTATTTCACACCAAACTGTTGTAACAGGGACTGTTAAAGCAAAACATGCCAACAAACGCCAGCTTAAATGTGACGTCTGTCCGAAATCTTTTCGTTTTGAGCATTGCTTAGAAGCTCATCGGCGTAGACATCAAGGACTATCTGGATTTCCATGTCCCTATGAAAATTGTTCACGCTCTTATGATCGCCTGGTTGAAATGAGAAATCATCTCAATGACCATAATGGTATCAGAAATGCCTACCAATGCGATGTCTATGATTGCAATAAGGTATATAAATGTTATTCCAATCTATGGCAACACAAGCGTGCAGATCACAATTGGGTTATGGTGCTGAAAGAGGAGAAGAAGGGACCAAGTCCTAAGAAATACATGTGTGAAAAGTGTGGTAAAGTTGTAGCGAGTCGGTATTTGCTCAAGAGTCACCATTTCATACATGTTGACAAATCCCAGTGGCCTTATGTATGTGATGAGGAGGGCTGCCACAGAAGATTTCGTTTGCGAGCTCAATTGGCAATACATAAAAATCGTCATGCTGGCATAAAGAACTATGTGTGTCCCATTTGTGGCGTGCGCAAAACTACAAGTACTGAACTTAAGACGCATATCAACTACCATACATTTGAACGAAAATATCCTTGTCGTATTTGCTCGAAAGTGTTTAAAAGTGCAGGAATATTGAACTCGCATACCCGCCTGGCTCACGTTCACGGAGGACACACAAGTTCAGCAAATATGTTTGAGTGTCGTTTTTGTAGTCGCAAACTCTCCTCGATGCTTAACTTGAAGCAGCATGAAAGAACTCATACTGGAGAAAAGCCGTATGCATGTCAGGAATGTGGTAAAACATTTGCCGGTCCACAGAATGTTGCATCGCATATGCAAATGCATTTGAAGGGCGAAAAACCGCATGTCTGTGGTGAATGTGGCAAAAGATTCAAATGGTCATCAAATCTAACTACACATAAGAAGTTGCATTTGGAAGGCAAGGCTGATGTTACacggaaattgaaaacaaaaactaagaaCAAAGGTCATCTTAAATGTGATATCTGTCCCAAAACCTTTCGTTTCCAACGTTGCTGGGAAGCCCACCAGCGAAGACATCAAGGATTATCGGGATATCCCTGTCCGTTTTGTGAACGGGCTTACAATCGTTTGGTTGAATTAAGAAATCATATCGACGATCATAATGGAATGCAAATTATCTACAAGTGCGACATCGAAAATTGCGATAAGATATACAAGTGTTCATCTGGCCTTAACCATCATAAGCGTGAAATCCACAAATGCGGAAAAGAACCCAAGAAAATGTGCAAGTCGGAACAAAAGCCTAAGAGCTACATGTGTGAAGAATGTGGACACGTCTCGCCTAGCCTTACGAAATTCAATGAACATCGTTTACTTCATGTCGATGAATCGCAGTGGCCTTATGTCTGTGATGAGGAAGGCTGCGCAAAGAGATTTCGAGCTaaacaaaaactgaatataCACAAACTGCGTCATGCCGGTATTAAGAACTACAGTTGTCCCATTTGTGGTACGCGAAAAACCACACGGACTGAGCTGACTAACCACATGAATAACCATACGCTAAAACGAACATATGCCTGTCATTTATGCCTAAAGTTTTGTAAAACTAGGGGAAATCTAAAAGCACATATACGCACTGTTCACCAAGGCATCAAACTGAATGGCAAAAGTCGGGAGGTCTCTGAGCAATACTCGTGTCGTTTTTGTGATCGTAAATTTACCAGAGCCTATTTCCACAAACATCATGAAATGACTCATACGGATGAAAACTCACGTAAGTGCAAGGAATGTGGTAAAATATTTCCTGGACCTCTAGGTCTGAGATCACACATGAAGCTCCATtgggaaagaaaacaaatgtttgcgtgtGACGAGTGTGGCAAAGAATTCAGATGGCAAGGCTACTTGGAAAAACACAAGAAATTGCATTTTGCAACGAAAATACCAAACGATTATGTTGAAGGCAATATACAGGTGAACAACATGGAGGAAGCAGTGGAAACGGAACTTGTCGATTATAGAAATAGTGTAGAAGACAACATACTTAATGAGAAATCATAA
Protein Sequence: MSDKRGMGRELFNKSLIKEVQKYQCLYDNSHADFRNKKKREDCWYEVGCAVGEAALICRNRWQDLRKQYAVQYSKMTTPGAVRNYYWRYTDAMSFLQSYVGKNTDSPNSITNFSKRDRFCRTCLCPIISDSGQKCSKVYSIFDSGDLAEKLTQCSNRQVVQWDEYPQSVCEKCYKKIVYFSEFQLMCQMSLDKFNTMVHDPNQVKFDLDQTIDCSLNSQIESTSLSSLLNEEDGIDNSSTLSKELKISSGISEDRVNFIESGEIVDDIMEEIIQVEIERSTEDSTNKKPCEENENISPFQNQAEELFEDGSDIEETTEHVNFEDLQLDDMQNEDDEDYIVDELAYTDALISHQTVVTGTVKAKHANKRQLKCDVCPKSFRFEHCLEAHRRRHQGLSGFPCPYENCSRSYDRLVEMRNHLNDHNGIRNAYQCDVYDCNKVYKCYSNLWQHKRADHNWVMVLKEEKKGPSPKKYMCEKCGKVVASRYLLKSHHFIHVDKSQWPYVCDEEGCHRRFRLRAQLAIHKNRHAGIKNYVCPICGVRKTTSTELKTHINYHTFERKYPCRICSKVFKSAGILNSHTRLAHVHGGHTSSANMFECRFCSRKLSSMLNLKQHERTHTGEKPYACQECGKTFAGPQNVASHMQMHLKGEKPHVCGECGKRFKWSSNLTTHKKLHLEGKADVTRKLKTKTKNKGHLKCDICPKTFRFQRCWEAHQRRHQGLSGYPCPFCERAYNRLVELRNHIDDHNGMQIIYKCDIENCDKIYKCSSGLNHHKREIHKCGKEPKKMCKSEQKPKSYMCEECGHVSPSLTKFNEHRLLHVDESQWPYVCDEEGCAKRFRAKQKLNIHKLRHAGIKNYSCPICGTRKTTRTELTNHMNNHTLKRTYACHLCLKFCKTRGNLKAHIRTVHQGIKLNGKSREVSEQYSCRFCDRKFTRAYFHKHHEMTHTDENSRKCKECGKIFPGPLGLRSHMKLHWERKQMFACDECGKEFRWQGYLEKHKKLHFATKIPNDYVEGNIQVNNMEEAVETELVDYRNSVEDNILNEKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -