Hcyr010461.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hydrotaea cyrtoneurina
Gene Symbol
ZNF275
Assembly
GCA_958296145.1
Location
OY282513.1:95082707-95085840[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2.1e-05 0.0014 19.4 0.1 1 23 204 226 204 226 0.95
2 15 0.00028 0.019 15.9 0.2 1 23 232 254 232 254 0.98
3 15 7.6e-06 0.00051 20.9 0.5 1 23 266 288 266 288 0.97
4 15 1.7e-05 0.0012 19.7 0.2 1 23 436 458 436 458 0.96
5 15 0.00018 0.012 16.6 1.0 1 23 464 486 464 486 0.95
6 15 4.8e-06 0.00032 21.5 0.3 1 23 503 525 503 525 0.98
7 15 0.0055 0.37 11.8 0.6 1 23 534 557 534 557 0.95
8 15 0.00093 0.063 14.3 5.3 1 23 563 585 563 585 0.98
9 15 0.00021 0.014 16.3 0.4 2 23 592 613 591 613 0.97
10 15 2.6e-08 1.7e-06 28.6 0.7 1 23 619 641 619 641 0.96
11 15 0.0018 0.12 13.4 2.1 1 23 647 669 647 669 0.99
12 15 4.7e-05 0.0031 18.4 1.6 1 23 675 697 675 697 0.96
13 15 3.9e-05 0.0026 18.6 3.2 1 23 703 725 703 725 0.99
14 15 2.5e-06 0.00017 22.4 0.7 1 23 731 753 731 753 0.99
15 15 2.7e-05 0.0018 19.1 0.4 1 23 759 781 759 781 0.97

Sequence Information

Coding Sequence
ATGTCTTCGGATCCACGGACAAAATGTCGCACTTGTATGAACGATAGTGGAACGTACCATGAACTTTACGATTATGTGGAAAAtgataaaattttggaaatgctTGACGGTGTAGTCCCACAAATCCACATTAAGATGGACAACGGCTCGTTTTCGCATCTGGTCTGCCAGGCATGTGTGGATAAATTACTCACCGGCTACAAATTCCAACAGTTGTGCATTGAGACTGATAGACGACTGCACGATATACTGACTACAGGAATCCAGAAGTTAGATCAGGAATCCACCACGGAGCCAGATTTGATCAAAGTATTAGATCCATTGACGGGGGAAGAAGGTTTCAAAATGAAACAAGAAATGGAAGATAATGAGAATTTCGAATGTGAAATCAATCCCGACGAGTTGGAGGTATCGCTGAAATCTGACGATGAATGGGAAGGCGAAGATGCAGGCGGTGGAGGAGCCGGCGACGGAGGAGTGACATATAATAGTGATACTGATTCTAGCAACGAGAAACTATCCgttttaaaagaaagaaaacttcGAAAATCTTCAAGAATACATGGATCTGAAAAatCTAAGAAATCGCGCCGCAATTCCATTTCGGCATTTCCCTGTCCCGAATGTGGAAAAATATTCGATCGTCTATATCGCCTGAAAAGACATGGCGCCGTTCATGCGAAGAAGCGGGCCTTTCCCTGCGACATCTGTAAATATAGTTTTGCCGCCGAGAAAACCTACCGAGCCCACATGCAGATACACGATAAGGAGGGCATTGATGGCTCATTCCATGAATTTCAATGTCCCGATTGTACAAAGAGTTTTGAGAAGAAAGCTTCGCTAATACAACACAGTCAAATACACACAAAGAAAAAggataaaacaaaagcaaaactgGGTAAAAACAAAGAGGAAGAATTGGGCGAACAGttggaaataaaagaaaacgaaaaagctCACGAAAATATGTCGTTGAGTGATAAACTATTGGAATTCAATAATGATGAAGAGCATTGTAGAGAAAGTGAAACGGAGAAAAATGAGGCAATAGATGAGACATTGAATAATGTTGTAAAACAGGAAATTCTGGTTACACCACAAATATTTGAGGAGCCTTTGGAGGATTACGATGACAATGGCGAATGGTTTGAACACGAAGACGAGTCTGATGACGATGATTCCGAAAATGAAACGTCTGAAAAAGATACTCCAACTAAACGTAAACATGGTCAAAATCTTGATTTTGTGGACACGGGCATAGGGGAAATTGAAAAACCCAACAGTCGGAATCGTAGAAATGGCAACTATCCCTGCGAAGTCTGCGGTAAGATATTCGATCGTCCGTATCGCCTGAAACGCCACAGTTCCGTACATTCCATCGAAAGACCACACGCCTGCGAGGTTTGCAAGTATCGCTTTGCCACAtccaatttattgaaaattcacaTGATCCAACATGAAAATGAGGCTGGCGGTAACTTTTCTTCACAATCTCGACCGGATGGCTTTAAATGTCCGGACTGCCCGCGTCGCTTTGAGAAGCAGGCTTCTCTGTCGGCCCATCGTCAAATACACACACGAAATGCTTCGGACGCTAACTACCCCTGCACGGTGTGCCAGCGTAATTTTATGTCCATAAGATCGCTCACGGAACACATAACGAATAAGCATCCCGAAGTAGAGAAACACAAGTGTGATCAGTGTGACAAGACGTTCGTTCTGCACGCTCACCTCTTGGAACATTTAAATCGCCACAAGGGCAATAAAAACCTGGTATGTCTTATATGTGAAAAAGAATTTGGCTATACGAACACGCTTAAGGAACACATGCGTACCCATAGCGGAGAGAGTCCATATCTATGTCCGCAATGTGGCAAAACATTCCGAAGTGCTAGCAATCTGCGTCAACACATGGAGAGGCACTTTGGTCTCAAGAAATACCAGTGTCCCGAATGTCCTAGTCGTTTCAACTGCCGGTCGGATTTAATAAAACACACCTCCACGCACACGAATGCAAAACCCCATGTGTGTGATATCTGTGGTTCCCGCTTTACACGAGCATATTCACTGCAAAAGCATAAATTGTTGCATTCCGGCGAGAGACCATTCAAATGTGATCAGTGTAGCATGACttttgctatAATTTACCATTTAAGACGACACATGCGTACTCATACGGGCGAAAAGCCATACAAGTGCAAGTATTGTGAACGTGCCTATGCCGAAAGTGGAGATTTGACTAAGCATTTGAGAACCCATGTGGGAGAGAACACCTACATGTGTGATCAATGTCCCATGGCGTTTAAATATCAATCGGAATTGCGTCAACATCTTTCGGAACATTACAAAATGGCCCAGCAGCTAATGCAGCAAGCTCAAAAAATGTCCGATGACGTCCAACAGCTGGAGCAGACACAGCAGCAGCTGGACGAGCAGCATCCGGAAGACCACCATgagcaacaccaccaccaccagcagcaccATCATCATGCGGCGCAACACCATGAGCCGCAACAACATCCAGCCATTAACATGCCCATTACCGATTCAAATCAGCCACCACCAACAATCAACATACCCATAACAAATTCAAATCACCCACCACCCCCATTGAATTTGGTTGACGGCTGTTGA
Protein Sequence
MSSDPRTKCRTCMNDSGTYHELYDYVENDKILEMLDGVVPQIHIKMDNGSFSHLVCQACVDKLLTGYKFQQLCIETDRRLHDILTTGIQKLDQESTTEPDLIKVLDPLTGEEGFKMKQEMEDNENFECEINPDELEVSLKSDDEWEGEDAGGGGAGDGGVTYNSDTDSSNEKLSVLKERKLRKSSRIHGSEKSKKSRRNSISAFPCPECGKIFDRLYRLKRHGAVHAKKRAFPCDICKYSFAAEKTYRAHMQIHDKEGIDGSFHEFQCPDCTKSFEKKASLIQHSQIHTKKKDKTKAKLGKNKEEELGEQLEIKENEKAHENMSLSDKLLEFNNDEEHCRESETEKNEAIDETLNNVVKQEILVTPQIFEEPLEDYDDNGEWFEHEDESDDDDSENETSEKDTPTKRKHGQNLDFVDTGIGEIEKPNSRNRRNGNYPCEVCGKIFDRPYRLKRHSSVHSIERPHACEVCKYRFATSNLLKIHMIQHENEAGGNFSSQSRPDGFKCPDCPRRFEKQASLSAHRQIHTRNASDANYPCTVCQRNFMSIRSLTEHITNKHPEVEKHKCDQCDKTFVLHAHLLEHLNRHKGNKNLVCLICEKEFGYTNTLKEHMRTHSGESPYLCPQCGKTFRSASNLRQHMERHFGLKKYQCPECPSRFNCRSDLIKHTSTHTNAKPHVCDICGSRFTRAYSLQKHKLLHSGERPFKCDQCSMTFAIIYHLRRHMRTHTGEKPYKCKYCERAYAESGDLTKHLRTHVGENTYMCDQCPMAFKYQSELRQHLSEHYKMAQQLMQQAQKMSDDVQQLEQTQQQLDEQHPEDHHEQHHHHQQHHHHAAQHHEPQQHPAINMPITDSNQPPPTINIPITNSNHPPPPLNLVDGC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00817672;
90% Identity
-
80% Identity
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