Hcyr019100.1
Basic Information
- Insect
- Hydrotaea cyrtoneurina
- Gene Symbol
- lola
- Assembly
- GCA_958296145.1
- Location
- OY282516.1:17307465-17309862[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-11 5.1e-08 33.0 0.0 3 45 422 464 420 464 0.90 2 2 3.9 7.3e+03 -2.7 0.9 4 20 557 572 557 572 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGTCCACCACCTACCAATCCCGccgcctcctcctcctcctcctcgcaTGGGCCCCCCGAAGGTCAAACATATTGCTTGCGCTGGAATAATCACAAATCGAATTTGGTGGAGATTTTAGATGCTCTCATCAAGGTCGAAAGTTATGTCGACTGTACGATTGTCGTCGACGATCAGGTGCAATTCAAGGCTCACCGCGTCGTCTTGGCTGCCAATTCGCCCTACTTTCAGTCCATTCTGCAGGATATGCCCATGGACCATTGCAGCATTATATTTCCCGGCGTGAAGGCCTTCGAAATGCGTGCCCTGTTGGAGTATATGTACACGGGCGAGGTGAATGTGACTCAAAGTCAGATACCGAAAATTATGCGCATTGCCGAAGAGTTGGAGGTTAAGGGATTATTTGATATGGCCGATTTGAAAGAGAAATTCCACAAGCTGAGCGAGGAGCACGCTGAGAGATCAGCTAACAATCCCTATGCCAGCACATCGGCTCCCGCCAATCCGTATTCGTCGGTAACTACCTCGACCACGACGACTCCTCAGAATGGTTCGAAACACAACGATTCCGAAAACTATCACAACAACTCGTCCTCAGTGATCTCCACCTCATCGAATATTTCACCCTCAGCCGCACCCACCAGCAGTTCATCGCCTCCCTACAGCAACTACAAATCACCCTACACCAGTTTGTATACCAAATCTCCCGGCCCCAATTCCAATCAAGCCAATTCCGCCAATGCTCAATCCACCCAGCAGACACCCACCCATCATACGCCCACAGATCGTTCCGGCCAATGGCCTATGTCGCCGTCGGCTGCTGCCGCCGCTGCCATGTTAAGCTCTGTGTATGAATCGGCTCCCGACATGAATCCGCTGAAACGCAAGAAGCTCTCCTCGATCTCCAGCATGCTCATGAACCGTGACACACCCATTCTACGCAATGTTTTGGCTCAAGCAAATCCCGCCGATTCCTCGCAACCCATGCCTCTGATGATACCGGCTGCTGGCGGCCCCACCAAAGGCGACAAATCAACATCGGCACCGGGCAGTTTGGACAAGAGTGGTCACAATAACAATCACAGCTTTAACGGCTCCGATTACAGCAGTGAAAAGaaatatcatgACGAACCACACTCTCCCTACACGGATCGATCCTTCGAAGATGATGGCTTTGATGCCAAAGGCAATTTCGGTGGCAACTTTGCCAACAATCCCAATCAGAAACCCGAATGGAAACGTTATAAGCAATACACCCGCAATGATATCATGTCCGCCATTCAGTGTGTGCGCGATGGCATGAGTGCGCTGCAGGCTTCCCGCAAATTTGGTGTCCCCTCACGCACTCTCTACGATAAGGTCAAGAAGTTGGGCATCACCACTGGCCGGCCCATGAATCGCACCATGAAGCGTAGTCCCAGTACTGTTGAATCCTCGGCGGCATTCCCGTATGTCCATGGCTATGGTCAAGCTTCGGCTGCCATGCACGAAGCCGTAGCCCGCGAAGAGAGAGAAATGAAAGAACACCACCGCAATGCCGAACATCATCATTTGCCGCCAACCATTCCCCATCCAGCAGCCGCTCTCTTGGACCCGGCATTCCTGCAACAAGCCCTGGAGAATCGAGGCGGCGATATAGCTGGCCGCGAAGCATTGCATGCCATGGCTTTGGCAGCCGCTGCTCATGCGGCAGCCAATCGTATGTCGACCAGCCCGGGACCTAATGGCAACGCTGTGCGTTCGCCCAGTCCCAGTAATTTCTCGTTGAAATATGGCAATATGCGCAGTGCCGAGCAAGAGCTAATGGAACGCCATGAAATGGAACGTGAACGTGAGAGAGAACGCGAATTTGTGGAAAGAGAGAGGGAGCGTGAACGTGAAATAGAACATGAGAGTGAGCGGGAGCGGGAACGTGAGCGGGAACGTGCCGATGAACGTGATGTGGAAGAAGAGGATCATGTTGAAGATTTGTCGGTGGCCCGCAAACAAGTTCATTCACCTGTGGAGGCGGCTCGAGAAAGAACCGAATCGCCATACTCACCGGACGCAGCGAACAGCGACACTGAGAAATCGGTTATAATGACCACCAAATTGCCggccaacagcagcagcgacgATTTCATCCATGAATCGAAATTGAAACGTGAGGTGGTCATCGACGATGTTAGAGCCGACTGA
- Protein Sequence
- MGGPPPTNPAASSSSSSHGPPEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDMPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFHKLSEEHAERSANNPYASTSAPANPYSSVTTSTTTTPQNGSKHNDSENYHNNSSSVISTSSNISPSAAPTSSSSPPYSNYKSPYTSLYTKSPGPNSNQANSANAQSTQQTPTHHTPTDRSGQWPMSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQANPADSSQPMPLMIPAAGGPTKGDKSTSAPGSLDKSGHNNNHSFNGSDYSSEKKYHDEPHSPYTDRSFEDDGFDAKGNFGGNFANNPNQKPEWKRYKQYTRNDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSTVESSAAFPYVHGYGQASAAMHEAVAREEREMKEHHRNAEHHHLPPTIPHPAAALLDPAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPSNFSLKYGNMRSAEQELMERHEMEREREREREFVEREREREREIEHESERERERERERADERDVEEEDHVEDLSVARKQVHSPVEAARERTESPYSPDAANSDTEKSVIMTTKLPANSSSDDFIHESKLKREVVIDDVRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_00817340;
- 80% Identity
- iTF_00816648;