Basic Information

Gene Symbol
ct
Assembly
GCA_958296145.1
Location
OY282513.1:99294972-99357925[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.8e-27 8.5e-23 80.7 0.0 3 72 1039 1109 1037 1114 0.94
2 3 9.2e-32 7.9e-28 96.8 0.0 3 77 1461 1536 1459 1538 0.96
3 3 1.1e-30 9.9e-27 93.3 0.0 3 76 1720 1794 1718 1797 0.96

Sequence Information

Coding Sequence
ATGGCCATACAGCCAACAGAAGACAGTCACTCCGAGGGTATGGAACTGGTGCTGGCAGAGagAGCTACCTTGGCTGAAAAGGAAGTCAACACTCTGAAGGAGCAACTATCCACCAGTACACCCAATACCGATACCAACAGCGACAGTGACAACAATCTAGACTTGTCCGCCATTGCCACCACAACAGCAGCTAATAtcaccaacaacaccagcagcagcagcgacagCCCCAACAACACATTGTCGGCCTCCGTCGATATCCCACCAAATCATCGTCTATCGCCCACATACGATCACAGCAATACGAAGCTATTGAACAGTGTGGCAGCTGCCATAACACTGCATCAGAACGGTGGTAATCTGTTGGCCACCACACCGTCACCGTCGCCACCCCTTTCCGATAGCGGCAACCACCAGCAACAGTTGAACGGCGGCTGTCTGAATaccaaattgtttttcaatcacGCCCAACAAGTCATGATGATGGAAGCTGCTGCCGCTGCAGCGGCCGCCGCCGCAGCTGCTGCCGTGCAACAGCAACAGTCGCCCATGCATTCGCCACAACCTGCTacacaccaacaacaccagccaCAAAATGCAAATGCGGTCGAGGATATGCACCAACAACCCACCAAGACAATGGAACACCCCGATAATGCATCCGTCGATAAGACCTCAAGTGATACTCAGCAGCCGCCTGCGGCGGACAAAGCAGACAACCGGTCGCCCGCTGAAGATAATGCGCAAACCGAGGAAACGGAGGGTGGCGATTGTCCAACAtcgattaataataataataacaacaacaacaacaaagatatCAATAGTTTTAATAGTGATAATAATAAACATAGTTTAAATGCCGATTGTGCGGAAACGGAAATGGAAAAGACAAAGACGACCAACAGCAATGCCGATGATGACGCCATCGTTGACCAGCTGCTGGAAGGCGACGAGAGTAGAGGGAAATTATTAATGGAGCCTAAGCACTCTGATTTTGTAGCTGCCAAAGAGAAAGAGATTAAAGCCTTATTTGAAGAAGTGAAACGTTTAAGAGCCCTCGAACAAACCCATTTGGTACAAATCCACCGGCTGGAAGAACATTTGGAAGCCAAACGCCAGCATATCGTGCGCTTGGAGGCCAAATTGGATAAACAGCAAATCAACGAAGCTTTACAACAGACCGCCGTCGTCCCAACCTCGGACGGTGCCGACGATCAAACACATGCCCCTCAGGCTAACCCAGACTTGGAAATGCCCCAGATGGTCatcgatgacgatgacgaagaGGAAGACAACGATgtcgatgacgacgacgacgacgtcgaagATGTCGTAGAGGATGTAAGCGAGAAGAGAGCGGCGCCCGTGAATGCCGACGAGgacgaggaggaggaggaggatgaGGACGACAATGACAACTGTGATTTagacaaagaaaacaacaatgacaatgaacaaaatcaaaatcaaaattcagcCGCCCTAGCCATGGCCGCCGACTTGGCGGGCGAACAGAACGACATGGACAGGCCCATGCAAAAGGAcacaatcaaaatcaaaaaggaAACACAATCACCCTTGTCGTTAGACTCTATCAGCCAACAGAATGCCATTGCTGCAGCTGCAGCAGCGGCTGCCGCCTGCAATAATGATCCCAATAAATTCCAGGAATTACTCATGGAACGCACCAAAGCCTTGGTGGCCGCCGAGGCTTTAAAGAACTCTGAAGaaaattgtttagaaaatgcCAACAAGGATGAAACCAATCGGGCGACATCATCGTCACCGACACATGTTGTGGAGGCAACAACAGCCCACAAGCCCAACAACACCCCGACAATAAGCGATGTTGAGGAGCAAGTTGAAGCCTCTAAAGTgccaaaaatcgaaatattagacgatgatgatgatgatgagaatGATGATGCGAATGACAATGAGCATGCCATTCATAGTCCTAATGATCGCGTGCTGGAAGATAATCGGGTGGGGGATCGGAATGAACATCCCCTGAAGTCTCTGACAGCGGAGAGTGACAAGGACAAAGTTATCAATTTGGATAGCGAAAAGTCTTGTGATGATGAGGCCACGGCCACATTTAAACAGAATGTTGAACGTTTCGGTTCATTGCTGGGCGAAGAGTTGGTCAATACGTATTGGAGGCGTGGCTTTGATCAAACCAAATCGTTGTATGCCTcgcaacaacaccagcaacaccaAGCACACCAAGCACacccacatcatcatcatcatcatccacatTCACAACATCTCCAGCAACATCCATTGATGTTGCCAGCAACATCCGtccaaacacaacaacaatcacaacaacaacaacaacatcatcatcatttacaacaacagcaacagccacaccagcaacaacagcagcagccgcctACGTCGTCGTCATCCACGTCGTCGTTGTCGCTGTCATCGTCGTCTGCCATACTACAACACCATCCAACACAACCGCCGGCTCCGCCCTGCGGTCCTTCGTCCACCACTTTGCTTAGTCAATTAGTTAATTCCACTTTTTCTACTCCCAACTCaaccacaactcaaaattcctCTTTACGTTCAACAGATGCACATTTTCCacatcatcaccaccatcaccacctccagcagcaacaacaccaccatcaccaccaccaattGCCTCCTCATTTAGCCGATCATCATGATAAGTCCGCCATGAACCATCATGAGTCCTCGGCCTCCAGTGCCAGTACGCCCAATTTGCCAGATCAGCGTTCGGCCGCCGAGGAtcaacagcaccagcagcaacagcagcagcagcaccaacaccaccaccacagtGTCTCATTGAACGGTTCGCTCAAGAATttcgaagacaacaacaacagcctcGGCGCCACACCCACCAGCCATCTGGGCGGCCATCCACACTTACCTCATGGCTTCCTACCCGGTCTACCATTCCAATTCCAAGAGCGTGGCCATTTCCGTTTCGCCGACGATTTGCAATTGCCACCCGGCACCTCAATGGCCGGCCGTCTCGGCGAATCCTTGATACCGAAAGGCGATCCGATGGAGGCCAAACTGCAGGAGATGTTGCGCTACAACATGGACAAATATGCCAATCAGGCATTGGACACGCTGCACATATCGCGCCGTGTACGTGAACTCTTGTCGGTCCACAACATTGGCCAGCGCATCTTTGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCAGAGTTGCTGTCCAAACCGAAGCCATGGGATAAACTCACCGAAAAGGGACGTGACAGCTACCGCAAAATGCATGCCTGGTCATGTGATGACAATGCCGTGATGCTGCTCAAATCGTTGATACCGAAGAAAGATTCTGGTTTGCCGCCTTACGGTGGTGGTCGTGATGATTCCATGTCCGATGATCGCAttgctcacattttgaatgAGGCCTCGTCGTTAATGAAGGGCAGCGGTCCATCGGTgttgcagcaacagcaacagcagcgtTCGGGACTGCCCGACGATTCGCACAGCACGGAGGATTCCAAGTCGCCTCATCAGCCCTGCTCGTCGCCCTTCTACAAGGAGCATCTGAAGCCGCAAATGGAAACGTCGCTCGGCGCTCCCGGTCACATGCGTCCCGATGAAGTGAATCCCGAGAAAATGGCTCGCCTGTATCAGGAGATTATGGCCCGTGCCCCCCGAGAAGCATTCCCCGGTTTTTTGCTTTCACCCTTTTTCAGCGGTGGTTTACCCACCGGCATGGGAGCCAATGCATTCCCCGGTCTGGCCGCTGATGAGAACATGCGCATGGCCTTTGAACGTGAGATGACCAaattgcaacagcagcaacagcaacaacactctCAACCTCCCAACTTTGCCAACTTCTCTAGTCTGATGGCCCTGCAACAGCAAATGTTGAATGGCGCCCAGGACCTGTCACTGTGCAAGGAGGACAACCTCATCAAGGACGGCAAACTGAATGGACAGCGTCACTCCTTCGATGGCTCCTCACAGAACTCACTCAGCAATGCCGGTCAGACTACCCCCAATGCCAAAGAAAATTCTGCCTCAGACGTTGAAAGACTTTATCCCGGTATGGTGAAAGCCGAACAGGGCAACAAGACACCAGCACCGCCACCATCCAGCAACGCTTCCACCGCCAACACCAACTCGGCCGCTCCCAGTCCACTCAGCAATTCCATACTCCCGCCAGCCATGACGCCCACCGATGAGTTCGGTGCCACGGCCAGTCCCCTGCAGAGAATGGCCTCCATCACCAATTCGCTGATTACCCAGCCGCCGGTACCACCGCATCACACTCCTCAGCAGAGGCCCACCAAGGCCGTCTTGCCGCCCATTACCCAGCAACAGTTCGATATGTTCAACAATCTCAACACCGAAGACATTGTGCGTCGTGTCAAAGAAGCCTTATCGCAGTATTCCATCTCTCAGCGTCTCTTCGGTGAATCCGTACTGGGACTGTCTCAGGGTTCCGTGTCAGACCTCCTGGCTCGCCCCAAGCCCTGGCATATGCTCACCCAGAAGGGTCGCGAACCCTTCATACGCATGAAAATGTTCTTGGAAGATGAGAATGCCGTGCATAAACTGGTCGCCTCTCAGTATAAGATTGCCCCCGAGAAACTGATGAGAACCGGCAACTATGCCGGCTCGCCACAAATTCCTCAGGGCTTGGTGGGCAAGATGCCGCCCTCCCTGCCCATGCAAAAGATGATGAGTGAGCTGAAATTGCAAGAACCGGCTCATATCATGCAGCAAATGCAAGCGGCCGCTGTCATGTCTGCTGCCATgcaacagcatcagcagcaacagcaagcCGTTCAGCAGAGCCAACAGGCTGCCCAGGCCGCCGTGCAAGCTGCCCAAGCGGCCGCTGCCGCTCAAGCCGCCCAGGCCGCACAAGCAGCTGCCCAACACCACCAGAGCATGCTCTTGACGTCGCCCGGCTTGCCGCCGCAGCACGCGATTCCACTTCCTGCCGCCAACTCAAATCCAACATCGGGCACCAGCACGCCAGCTGGCCCGCCCTCCGAGAAGAAGCAGCCCATGATGATGCCCATCCATTCACCCCACCAAGCAAATGCCATGCGTAACATGCATCAGCACATGTCACCCACCGTTTATGAAATGGCAGCACTCACTCAAGATCTGGACACTCAGGTTATCACCACCAAAATCAAGGAGGCTCTGCTGACCAACAACATTGGCCAGAAGATATTCGGCGAAGCCGTCTTGGGCTTGTCCCAAGGTTCCGTCTCCGAATTGCTGAGCAAACCCAAGCCTTGGCACATGCTATCCATCAAGGGCCGAGAACCGTTCATACGCATGCAGCTGTGGCTCTCCGATGCCAACAACGTTGAACGCCTGCAGGCCCTGAAGAATGAAAGGAGGGAAGCATCCAAACGTCGCCGTTCCACTGGACCCAATCAGCAGGACAATAGTTCCGACACTTCCAGCAATGATACGAATGACTTCTACACCAGCAGTCCGGGTCCCGGCTCCGTGGGCAGTGCGGGAGCTCCACCCAACAAGAAACAACGAGTCTTGTTCTCCGAGGAGCAAAAAGAGGCTTTGCGGCTGGCATTCGCTTTGGATCCCTATCCGAATGTGGGCACCATTGAATTCCTCGCCAATGAATTGGGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGTTTGAAACAGCAAGTGCCGCACGGTCCGCCCGGCCAGGAAACCAACATACCGACACGAGAGAACACCAATTCAACACCATTTGATCCCGTCCAGTTCCGCATATTGCTGCAGCAGAGATTGCTCGAGTTGCACAAAGAACGCATGGGCTTGGGTGGCAACAACGCGTTGCCATATCCGCCCTACTTTGCCGCTGCCGCTCTCCTGGGACGCAGTCTGGCCGGTATGCCCAGTGCCGGCGGTCCCGGCGGCCCCAACGAAGCCGAATTGAGAGCCCTCAATCAGAAATTCCAAGAGCAAATGGCCGGTTTGGATTTGTCCATGAGCTCACTGAAACGCGAGAGAACCGATGACTTCGATGACGATTTGGACGACGGTCATATGAGTGAGAACGAGAATGACTCGTTGGATGGCGAAGACAAGGGGGGCGAGTTCAAAGCGTCGGCCTTGAGCAGTTTGAATGCCCAGCATTTCTTGAATAACATGCGCTTGAACCGACGCAAACCTGCCGCACCACAATGGGTCAATCCTGCCGTGCCCACGGCGTCCGAAGCGGAACGCATCATCAACGGCGTGTGTGTTATGCAAGAGGGCAACGACGAATCGTCGCACAATGACGACGAGGCTCACAAGTCGCACAACGACATTGAGGATCCGGACTCGGAACCACCGCACCATTTGGTCATGGAGCCGGAAGTGTTGATCAAACAAGAAAAAGAAGACTGTGAAAGTGATACGGACAAGCAGCACAGCGACGAGGCCCTGATGAGTGCCGAGGAGCGACTCAAGCTCTTGCAGGAGGAAAAGCTGAGAATGGTGCGTGTCAGCCGTTTGAGCAATGAAGACGAAGGTCCAGCACCAGTGCCGGCAACGGCGTGGAATTATTAA
Protein Sequence
MAIQPTEDSHSEGMELVLAERATLAEKEVNTLKEQLSTSTPNTDTNSDSDNNLDLSAIATTTAANITNNTSSSSDSPNNTLSASVDIPPNHRLSPTYDHSNTKLLNSVAAAITLHQNGGNLLATTPSPSPPLSDSGNHQQQLNGGCLNTKLFFNHAQQVMMMEAAAAAAAAAAAAAVQQQQSPMHSPQPATHQQHQPQNANAVEDMHQQPTKTMEHPDNASVDKTSSDTQQPPAADKADNRSPAEDNAQTEETEGGDCPTSINNNNNNNNNKDINSFNSDNNKHSLNADCAETEMEKTKTTNSNADDDAIVDQLLEGDESRGKLLMEPKHSDFVAAKEKEIKALFEEVKRLRALEQTHLVQIHRLEEHLEAKRQHIVRLEAKLDKQQINEALQQTAVVPTSDGADDQTHAPQANPDLEMPQMVIDDDDEEEDNDVDDDDDDVEDVVEDVSEKRAAPVNADEDEEEEEDEDDNDNCDLDKENNNDNEQNQNQNSAALAMAADLAGEQNDMDRPMQKDTIKIKKETQSPLSLDSISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAEALKNSEENCLENANKDETNRATSSSPTHVVEATTAHKPNNTPTISDVEEQVEASKVPKIEILDDDDDDENDDANDNEHAIHSPNDRVLEDNRVGDRNEHPLKSLTAESDKDKVINLDSEKSCDDEATATFKQNVERFGSLLGEELVNTYWRRGFDQTKSLYASQQHQQHQAHQAHPHHHHHHPHSQHLQQHPLMLPATSVQTQQQSQQQQQHHHHLQQQQQPHQQQQQQPPTSSSSTSSLSLSSSSAILQHHPTQPPAPPCGPSSTTLLSQLVNSTFSTPNSTTTQNSSLRSTDAHFPHHHHHHHLQQQQHHHHHHQLPPHLADHHDKSAMNHHESSASSASTPNLPDQRSAAEDQQHQQQQQQQHQHHHHSVSLNGSLKNFEDNNNSLGATPTSHLGGHPHLPHGFLPGLPFQFQERGHFRFADDLQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGGGRDDSMSDDRIAHILNEASSLMKGSGPSVLQQQQQQRSGLPDDSHSTEDSKSPHQPCSSPFYKEHLKPQMETSLGAPGHMRPDEVNPEKMARLYQEIMARAPREAFPGFLLSPFFSGGLPTGMGANAFPGLAADENMRMAFEREMTKLQQQQQQQHSQPPNFANFSSLMALQQQMLNGAQDLSLCKEDNLIKDGKLNGQRHSFDGSSQNSLSNAGQTTPNAKENSASDVERLYPGMVKAEQGNKTPAPPPSSNASTANTNSAAPSPLSNSILPPAMTPTDEFGATASPLQRMASITNSLITQPPVPPHHTPQQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYAGSPQIPQGLVGKMPPSLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHQQQQQAVQQSQQAAQAAVQAAQAAAAAQAAQAAQAAAQHHQSMLLTSPGLPPQHAIPLPAANSNPTSGTSTPAGPPSEKKQPMMMPIHSPHQANAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTNSTPFDPVQFRILLQQRLLELHKERMGLGGNNALPYPPYFAAAALLGRSLAGMPSAGGPGGPNEAELRALNQKFQEQMAGLDLSMSSLKRERTDDFDDDLDDGHMSENENDSLDGEDKGGEFKASALSSLNAQHFLNNMRLNRRKPAAPQWVNPAVPTASEAERIINGVCVMQEGNDESSHNDDEAHKSHNDIEDPDSEPPHHLVMEPEVLIKQEKEDCESDTDKQHSDEALMSAEERLKLLQEEKLRMVRVSRLSNEDEGPAPVPATAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00816439;
90% Identity
iTF_00816439;
80% Identity
iTF_00816439;