Basic Information

Gene Symbol
LamC
Assembly
GCA_958296145.1
Location
OY282512.1:71691120-71691554[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-08 5.3e-05 23.7 0.1 9 62 9 62 5 65 0.96
2 2 1.1 1.1e+03 0.2 0.1 43 53 75 85 60 96 0.55

Sequence Information

Coding Sequence
atgcaacaatccatgcaagagttgcgcgaacaatacgaagctgccgccaatagtagcacggtagctgcttcaagtgccatCGACGAATTACTTATGCGAGTCGATAAGTTGAATAGCCACaacagtgaattggaatcgacgaatgctgccttgaatgtccgtgttcacgatctggatcagttgttggtgaatgaacgtgctcgccacaatgccgatattaccaatctgAAAGCGGAAttgcaacgaatgcgtgatGATATGATACAACAATGGCAGGAATATCAGAAAAATCTGGGCCGTATTATTCCGCCGGCAGCTCCTCACattggaggaatctggaaggaAGGCGGCAAAGctgagaaatgtcacatcaaaagcgtgattggcgatagtAACATTCCGGAAGAGGCATGTCACCGATATTACACCAGATGA
Protein Sequence
MQQSMQELREQYEAAANSSTVAASSAIDELLMRVDKLNSHNSELESTNAALNVRVHDLDQLLVNERARHNADITNLKAELQRMRDDMIQQWQEYQKNLGRIIPPAAPHIGGIWKEGGKAEKCHIKSVIGDSNIPEEACHRYYTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00816304;
90% Identity
iTF_00816304;
80% Identity
-