Hten010278.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hydropsyche tenuis
Gene Symbol
CRZ1
Assembly
GCA_009617725.1
Location
VTON01000019.1:102799-104226[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.026 1.9 9.1 1.5 3 22 199 218 198 221 0.90
2 8 0.6 44 4.8 1.5 2 23 225 246 225 246 0.95
3 8 0.0074 0.55 10.8 1.1 1 20 252 271 252 274 0.91
4 8 0.00044 0.033 14.6 1.5 1 23 280 302 280 302 0.98
5 8 0.0042 0.31 11.6 0.4 1 23 308 330 308 330 0.95
6 8 0.1 7.4 7.2 4.7 1 23 335 359 335 359 0.97
7 8 6.5e-06 0.00048 20.4 0.3 1 23 365 387 365 387 0.97
8 8 0.054 3.9 8.1 0.7 2 23 395 417 394 417 0.93

Sequence Information

Coding Sequence
ATGGATAATCTGGATCGATTTTTCCCagatttgatattaaataactTGAATTTGCAACGAAAAAGCGGGAAGTTCTGCGACGTCCGACTCTCCGTGGGAAAACACTACACCTGGATTCACTCATCCATAATGTGCTCCCTTAGCCCTTTCATCAGCAAAGAATGCTGCAACGCAAATAAAACCCCTCAGATTGGATGCTACAAGCGTTTTTCGTTCAACTCACCGCTCACTAtcaaattgtacaaaaaagaCACCTTTGATTGTTTCAAATGTTTACAAATGTTGACCGATATTATATACGGTCAAAAAATCGACTTTGATCCGCTTCATACTTCTCATCTATACaatttgtgtaatattttgaatttatccgACGTTTTAATGAAGCTTATATACAACCGAATACAGATTAATAAAGAAACTGATGATTCTTTAGAGCTTCCGGATAAATCCAGTGGAAAAATAGTTAAGAATGATGTATCAGATTCTTCTGAAATAACAGAAGGACCAAACAACGCCAAAAGGAAAGTCCGCAGTATGAGATCGCGGCTTTCCGTATCGAACCTAAAAGCCTTATCAGGCAAAATGCAAGCATGCCTCGATTGTTCCTTTAAATGTTATAAACCGTCGAACTTATTGACACACTTACGTGATACTGGTCACGGAGGAAACGTGTGTTCTTTATGCCTTAGCCAATTCGAATCCCACGAAAAACTGACCGACCATTACCAATTGCACGACCATCCGAAGCCTTTTTTCTGCTCGGTCTGCGATTTGAGGTTCCAAACGCGAGGATTCCTCAACCAACATTTACCGAGACATTCTAAAGAGACACCTTATATGTGCTCGTTCTGCCAAAAAGGCTTTAAATGGAAATACGGACTGAACAGCCATTTGATGACGCATTCGAACGAAAAGAAGTTTCTATGCGACGAATGCGGATTCAGCACGGTATATGCGAAAACTATGCGAGCCCACAAATTGACGCATACCGGAGAATTATTCAGATGCTCGTTTCCAGGATGTATGCATACTTGTTCGAGGAAagagaatatgaaaatacatcTATCTACTCATAGCAACGATAAACCGTTCGTTTGTGAGATCTGTGGTTTGAAATTTACGTTGAATAAGAGTTTAAAGAGACACGCTATGATCCATAATGAAGTTGGAGTTGTTAAAACGTGTCCACATTGCCCGTTTGAAGCTTTACGTACGGATAACTTGAAAGCTCATATCCTTAGACAGCACGGAGATAAACAGTTGAGCTTAGAACTGAGTGATAATATCGTTAATCAGACTGATGTTAATGTTGATGTGGCGATAACTGAGCAACGATCGTTTCGAGATTTCAGCATGGAAGATCTGTCCGTTTTGGCTGATGCGGCGTCGTCGTTGTCTAAAATAAAGGATGTAACgtctaaatga
Protein Sequence
MDNLDRFFPDLILNNLNLQRKSGKFCDVRLSVGKHYTWIHSSIMCSLSPFISKECCNANKTPQIGCYKRFSFNSPLTIKLYKKDTFDCFKCLQMLTDIIYGQKIDFDPLHTSHLYNLCNILNLSDVLMKLIYNRIQINKETDDSLELPDKSSGKIVKNDVSDSSEITEGPNNAKRKVRSMRSRLSVSNLKALSGKMQACLDCSFKCYKPSNLLTHLRDTGHGGNVCSLCLSQFESHEKLTDHYQLHDHPKPFFCSVCDLRFQTRGFLNQHLPRHSKETPYMCSFCQKGFKWKYGLNSHLMTHSNEKKFLCDECGFSTVYAKTMRAHKLTHTGELFRCSFPGCMHTCSRKENMKIHLSTHSNDKPFVCEICGLKFTLNKSLKRHAMIHNEVGVVKTCPHCPFEALRTDNLKAHILRQHGDKQLSLELSDNIVNQTDVNVDVAITEQRSFRDFSMEDLSVLADAASSLSKIKDVTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00815437;
90% Identity
iTF_00815437;
80% Identity
iTF_00815946;