Basic Information

Insect: Hydropsyche tenuis
Gene Symbol: -
Assembly: GCA_009617725.1
Location: VTON01000019.1:90363-97075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0081 0.6 10.7 0.3 2 21 1354 1373 1354 1374 0.92

2 9 0.0003 0.022 15.2 2.6 2 23 1558 1579 1557 1579 0.97

3 9 0.00042 0.031 14.7 2.4 2 23 1612 1633 1611 1633 0.96

4 9 6.5e-05 0.0048 17.3 3.3 1 23 1653 1675 1653 1675 0.98

5 9 0.00083 0.061 13.8 5.4 2 23 1703 1724 1703 1724 0.97

6 9 0.0069 0.51 10.9 3.1 3 23 1758 1778 1757 1778 0.96

7 9 0.028 2 9.0 0.5 1 20 1806 1825 1806 1827 0.94

8 9 0.00014 0.01 16.2 3.0 3 23 2051 2073 2050 2073 0.96

9 9 0.0012 0.088 13.3 3.0 1 23 2079 2101 2079 2101 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0081	0.6	10.7	0.3	2	21	1354	1373	1354	1374	0.92
2	9	0.0003	0.022	15.2	2.6	2	23	1558	1579	1557	1579	0.97
3	9	0.00042	0.031	14.7	2.4	2	23	1612	1633	1611	1633	0.96
4	9	6.5e-05	0.0048	17.3	3.3	1	23	1653	1675	1653	1675	0.98
5	9	0.00083	0.061	13.8	5.4	2	23	1703	1724	1703	1724	0.97
6	9	0.0069	0.51	10.9	3.1	3	23	1758	1778	1757	1778	0.96
7	9	0.028	2	9.0	0.5	1	20	1806	1825	1806	1827	0.94
8	9	0.00014	0.01	16.2	3.0	3	23	2051	2073	2050	2073	0.96
9	9	0.0012	0.088	13.3	3.0	1	23	2079	2101	2079	2101	0.99

Sequence Information

Coding Sequence: ATGGAAAAGGACAAGGCCAAATTCAGTTTTGGCGAGTCGCTCGACAGCACGATCGACGCGAGTGTCGCCGAAGCGAACCATGAAGACTCCGTCAACTATCAGACGGCGGACGAAGAGAACAGCTCCAAATACTATTCCGTCATAGAAGACAATTCCATCCTCGAAAACATCAGCAATTCCAGTCTGACGATGCGCATCGACAAAGAATCTCCGGACGTTTTTCAAATCGCCGGAGAGTCTTCAGTCGATCGACCGTTCGTAACCGACtttaaaacgttaaatatCCTCGATAGTTTATCTGCCATGGACGCCGAATCGGTGAATAAGTTTAATATCCACGAAACTGTAGAAACTGACGAAGTCCTTCGTCCCAGCATGGATATTTTCGACGACAACGAAAGTTCGGTCGACGGACACGAGTTGATCATCGACGACGATCCGCAACCCGATGAAAAGTCTGATGATTGTTTGGAAAGCGGCGCGGAGATGTCGACAGACATGCAGTACGTAGAAGATACTTCGGAAAGTATCGACAGTGCAAAGAATTTGGGTTTCGGATTGTCGAAAAAGATGCTTTCGGAAGAAACGCCCGAATTGACTTTGCAGGAGACCAAAACCTCGTGTAGTGAAGATCTGGACGACTCTCCTAAGCAAATAGTCGATGTCAAAATATTCACCGACGATTCGGGAGATACGGAAATGAAATCGGAGAGTTATAATTTTCCTGAAGGCAGCCATCGTGTGACTCTTGTTATCGACGGAAATAATGTGGAAGCTATTAATATTGGACaaaatatctacatatatacTGACTCTAACGGAGAACTGACTGCGTTTCAAGTGATAAAAGATAATGGAAATCcgagtataaaatatttacacgtcggTAAAAATGAGGATGGTAATATAGAAGTATACGAAGAACAAGTCAATCAAATAACGATTACTCCTGAAAATGCAGATTTTGCCAaagaaaaagaAATATCTAGTAATGTACCTAATTCGGATGCGGGAAAAACAGAGCAGAAGTCGTCTGCTGATATCGAAAAGACTTCACAAGATCTGATAAAGGCTGTAATgaatcaagaaaaaatatttcttagtgcaaatagtgaaaataaaacttcgcTACTGTCTGAAAAAGAAATTCCCAGTAAAGTCGATCTTTATAAGAATTGCAAGGTCAtgttaaatgataaattgaaatcttCCAACGAAAACGATTCTTCGTTGAATACTAGCGAAATATTCTCGAAAACTTCTCTTGTAGTTCCAAAGGAAGCTAACCataacaagaaaaatattttggaacgTAAAGAAAATTCTATAACTGATTCaatttctaaagaaaaattgacaagtttttattttgatcaatctGTCGATcataacgaaaacgaaaagaaaacgaataaaactttaactgataatttttctttggaagttccatccaaactGGATAACTGTAAGCATCAAGAAAGTAAAATAGAATCTTTCAATGCTTCAAAAGTGGAATCAGTTACTGAAAACAATTGTGAAAAAGTGAGTCctactaataataaaaatattatggaaaacGAATCAATATCtcaatcgattgaaaaaattatgagtgATTCGGATAGATTGAGAAAAATGACTGGTTTGGGAAAAGATAATATTCATGTTGCaaacgataatttaaaaaataaatctaacgcgagtgaattgaaaataaacgatgTTTCgactaattttcaaaagtcGCCACTGAAGAATTTGAATGACGTTGACAATAGTGTCgatgtgatgaaaataaaaagtactAGTGTTACtgttaaaagttatttatcgGATAATAAAGCAGAAGGCTTACAAAACATTAGTGTTAAAgatatttctattgaaaaactgAAACCTGAGCTCTCTCCTGAAATAAAGAAGGATCAGTCAATCGTCGAATCAAAGATATTGAAATCGGATAGTGCTTTGAATTCGTTAGATACAAACGAAGTAAAAAGTGGTTATTTTAAGATCGAAAAAGCTTTAGATAACAAATTCGACAAAGTAAAGGATTCCAATTTCAAAGACGACAAACTTTCAgtagaatatacaaaaaaagaaaaaccttcACCCtttcacaatattaaaaacgcAGATTGTCTTATTGAgtctaataaaaaagttgattctgataaacaaaaatcttcACCAACTGAAAGAAAACGTGAAGATATTATCCTTTCatgtgaaaatatcaaaaccgataaacaaaaacatacaaaagaTTCTCTTTCGAGTAATTCTCAACCCGCTAATTTATCTAACAGTGATTCtcaaattaatatcgaatCGGATGATGAGGAAGAATATATCGAAGGAGAACCAGTTACTGGAGATTCTGGCGTCGATTGGAGTGACGGAAATGCTCAAAACGATGCTTCTAAACCGAATTCAACAGTCACACAAGTCGATCAGACTGATAGAGACGATTTGTTCAATTCAgcagaaaataatgaaagcatCGAATCTGATAAACTATCGGATGACTCGAATAACTTATTAATAATCGATTCGAATATTCCCAACGAGattttggatgaaaatattactaaaaCTCAGACCGTTCTAGacgtgaaagaaaaaatattagtaatcGATTCTTCCGAATCATCGAACATACTAAAAAACGTTTCTCTCATCGAAAACGATTGTACGAAAGATAAAAACGAAGATATCGTCAACGCCGAAGAGatcgaaaacattttgaacGATTCTTGTACGAATGTCGACGACGAAATGAACGAAGAAACCGTCACTTTGCATATTGTGGACTCGAATGCTTCGACTGACGATATGAACGACCTGACTTCTACTTTTGTGACAAAACAGGTCGTTTTAGATTATGGGAAATCGCAGGAATACATCACGAAAGCCTGCGAACCGGAAGATCTTAATgaatctttcgaaaatttccatcatAAGATTCCGTTGAAGACTTATTCGAGGGAGGTTAAACCGATGTTGTCTTCTCCTAATAAAGGATTGTCGAATATGTCTATTAAACTTACGCCACAAATCACTGTTTGTGAATCGAAGCCGAATGATATAAAAGAATCACCGTTATCTAAAAAAACTGTTccttatagtaaaaatattgaaattatcgcTTTAGAAGAATCTATTTGTAATACTTCAGAAGAATCTGTCGACGTGAAAGTTTCTCCGAGACAGAAATCGAGACAACCACGAAAACAAGTTTTTACTACCGTTGCTAAATCTgatatagaaattatatttacaggCAATGACGAAATCAAAGAACAGAATGTTTCTAAGTCGGCTAAAACATATTCTAGATCGAAACATAAAGAAACAAgcgttgaaaaattgaaaccgATCATTAGTAATTCTATCAaaaatgaagataaaaaagttttaaatacaGTTTCTAAagttgattataaaaaagagATTAAGAATGTTATTGAATCACcacttattgaaaataatcaaaaagcAATCACCGATTCTTTGGTAAAAAGTCCTGAAGTtgctaaaaaagaaaatgatgaaaaaaagacaattgttaatattgataaatcgaATGACAACCGAGAAGATGAGAAAAACAATAGTGTCTCAAACTCTCCACTTTCTAATTCTGCTAAAAGAAAACGAGGACGTcccaagaaaattttatctccGAATTCGAGTGTTTTCGAAAGTGTAATCTTAAATGTGGACGGCTCTTTGCGAAAACCGTTGACTAAAATTCCCATTAAAGCTAAAactgataatgaaaaagaGACCGAGTTAAAATCGAAAGATGAAGTCGAACCAGTCAAAGAAGAAGCAGTCGTTAAGGCTTCTCCAGATAAAAACGAGAGTGATGAAAAAGTTGAGGATAAAAATACAGATAGTGTAGAGGAGACTGGAAAGCGAAAAAAGGGTCgccccaaaaaaatattgtcgtTGAGCTTTGACGAGTCGAGTGAtcttaaaagaaaatctcTGTCGGACTTGGATTGTAATAAGTCGAATAGTTTTAGAAAAAGTGATTTAGTGAACTCGGAAAATGTTTGTCCGATATGTTCGAAGAATTTCAGATCACccaatgttttattgaaacatgCGAAACATTGTAACGGTGTAATCAATTTGGAGGCTTTCAAATCGccgaaacgtaaaaaaattgataacacATCAGAAGTCGTCGATGAGTCAAAAACTGATGATCTATCAATTTCTCAAGAATCTCAAGAATTCAACACAATAGACGCTGACTCGTCTGTGGATTCATCGAATTTAGAAAACAAAGAAATTAACGATAGTATAAACAGTACGAGTGATGTTTTGAACGACACATCTACAATCGAAATTATAGTCCCTGAGAATAGTAAATGTACACCAGAGCCAGAAATTTTAACATCGGCAGATAAAGTCGAAGATAAATCACTCGAAATTATCACTATCGATGATGAAAAGTTACCTGAAAACGATCCAGTCGATACTTCAACCAAACAAGACGTATCGGAAGAGTCTAATGTGACTTCGAAAAGTAGCAAATTAGATGATACGAAATCTCCTAAAGGAAAATTGACGAAGAAATTAGACACCGCAAACAAGCTGTCTCCGATGAGTAGACTTTCGAAATTCCTAAGTACAAAACCTCCCGTTAACAAAGTGATAAAGTGCGAAATTTGCAACAAAACATTTAGGCAATTAGCTCATATGGTTTATCATCGCAACAAACACGATGAAGAAAAGCTAAACGATCCGATTCCTCAAGAAAAACCGGTTCCGAAGCCGATCGAGCAACAAGTACAAAAGAGCGAATGCGACGCCATtctgaaatgtgaaatttgcCAAAAAGGTTTCCGCAAACTTCACCATTTGGTCGCACATCGAGAAGTGCATGAAGTGAAATCCCGAAGAGCGTCTACGGTCAGCGTCAAAAGCGAACCGGAAGCTGGTTTCCGCTGCGATACTTGCGATAAGTCTTTCAGGAAGTTGCACTATCTGGTCGCTCATCGCGAAACACATTTATCTGAAAGTACCGAAATCAGTTCTAAACAAACCACCGAAGTTAAAAGTACTGAAAAAGAAGTCGAGAAAGACGACGCCACTTGCACGGGATGCGGAAAGTCGTTCAGGAAACGTCATCATATGATCGAACATAGAGACACACATTGTTCTCCCAAAAAGAAAAGGCTGTCGGAAGACAGTGAGTTTTCTGAGAACAATGTGCGTTTATCGATCACGAGTTCTACTAGCGACGAAACTAACAATTGCGGCATATGTGGAAAGTCGTATCGTAAACTTCACCATATGATCGAACATAGGGAAAGTCATGCTGAAGCGGTCGTGAAGTCCGAACATCGCGTTTCGACCAGATTTTCTTCGCCGGATTCGCTCAACACGAAAGATATTATTCACGAATGCTCAAAGTGCTATATGGTTTTTCCTAATGTGAATTCTTTGAATAAACATACCGAGAATTGCACacgtaagaaaattttcggtaaaaaGCCTGTAATTAACGCAAATTCTAAATCGAACAAGAGTTTAGTCAAAAATGGCAATAGCGAGACTAGTAAAGTTTCGAAATTGCCGAAGTTCGAAGATATAGAGAAACCTTCGACTAGCAAAGTTGTTAAATCGAAACCTACAACTCAAAAGAGTGACGTGGGAACTAGTgtggttaaaaatattaccagAACGAAATTCAAAAGTTCAGAAAACGAcgtgaaatacaaaattaatccGGCTTTCAAAGGAAAAGTTGAAAACAGTGAACCTTCAAATAGTTCGaccaaattgaaatcgaaaccGAATGATTCTATTCTTGCTGGTCTCAAAGTTCCTAGTGCGAGAATGTTGAAGACTATTATAGAAGAAACCACTGTCAAGTATTCTTTCCCTAAATCTCCCAAAGCTGTAGGAAGACCAAAAAATGATAGCAAACTGCCAAAAAGTACTCTTCGGAAATCAGTCGTAActaaaactaataataaacCAACGTTGACCATCAGAAGGAGATCGCTAGGCGGAAGAAAATCGTTAGAAATTAAAAGAACGATCCGAGAACCGGAAACTCGACAAAAATTACCACGCAAATCCACCGCTTCTATAGATACTaataaaagtatgaaaaatacgaaagAATCATGCAAATGTGACTGCGGAAAACAATTCGATAATAACACGTTACTCAAAAAGCACATGGACACCGAACATACTCCGCCGAAATCGTACAAATGTCACACATGCGGCGCTTCGGTCAGAACTGCGATTCAGttttctaaacacaaaaaaacccatGAGGATTCGCACTCGGGCCAATCTGTTCAGAATAAGAAGAGCAGGTCTTCGGCGGCTTCGGCGAGCACGTCGATGAAAAGCAAAGGCGCAACTCCTCGGCGAGATACGAAGAAGTTGAAAGACGCTCATCGCGGCGTTCCGTTGTCTGATAAAATGAAGAAAGCCTTTGCAGGCTCTAAGTTTTAA
Protein Sequence: MEKDKAKFSFGESLDSTIDASVAEANHEDSVNYQTADEENSSKYYSVIEDNSILENISNSSLTMRIDKESPDVFQIAGESSVDRPFVTDFKTLNILDSLSAMDAESVNKFNIHETVETDEVLRPSMDIFDDNESSVDGHELIIDDDPQPDEKSDDCLESGAEMSTDMQYVEDTSESIDSAKNLGFGLSKKMLSEETPELTLQETKTSCSEDLDDSPKQIVDVKIFTDDSGDTEMKSESYNFPEGSHRVTLVIDGNNVEAINIGQNIYIYTDSNGELTAFQVIKDNGNPSIKYLHVGKNEDGNIEVYEEQVNQITITPENADFAKEKEISSNVPNSDAGKTEQKSSADIEKTSQDLIKAVMNQEKIFLSANSENKTSLLSEKEIPSKVDLYKNCKVMLNDKLKSSNENDSSLNTSEIFSKTSLVVPKEANHNKKNILERKENSITDSISKEKLTSFYFDQSVDHNENEKKTNKTLTDNFSLEVPSKLDNCKHQESKIESFNASKVESVTENNCEKVSPTNNKNIMENESISQSIEKIMSDSDRLRKMTGLGKDNIHVANDNLKNKSNASELKINDVSTNFQKSPLKNLNDVDNSVDVMKIKSTSVTVKSYLSDNKAEGLQNISVKDISIEKLKPELSPEIKKDQSIVESKILKSDSALNSLDTNEVKSGYFKIEKALDNKFDKVKDSNFKDDKLSVEYTKKEKPSPFHNIKNADCLIESNKKVDSDKQKSSPTERKREDIILSCENIKTDKQKHTKDSLSSNSQPANLSNSDSQINIESDDEEEYIEGEPVTGDSGVDWSDGNAQNDASKPNSTVTQVDQTDRDDLFNSAENNESIESDKLSDDSNNLLIIDSNIPNEILDENITKTQTVLDVKEKILVIDSSESSNILKNVSLIENDCTKDKNEDIVNAEEIENILNDSCTNVDDEMNEETVTLHIVDSNASTDDMNDLTSTFVTKQVVLDYGKSQEYITKACEPEDLNESFENFHHKIPLKTYSREVKPMLSSPNKGLSNMSIKLTPQITVCESKPNDIKESPLSKKTVPYSKNIEIIALEESICNTSEESVDVKVSPRQKSRQPRKQVFTTVAKSDIEIIFTGNDEIKEQNVSKSAKTYSRSKHKETSVEKLKPIISNSIKNEDKKVLNTVSKVDYKKEIKNVIESPLIENNQKAITDSLVKSPEVAKKENDEKKTIVNIDKSNDNREDEKNNSVSNSPLSNSAKRKRGRPKKILSPNSSVFESVILNVDGSLRKPLTKIPIKAKTDNEKETELKSKDEVEPVKEEAVVKASPDKNESDEKVEDKNTDSVEETGKRKKGRPKKILSLSFDESSDLKRKSLSDLDCNKSNSFRKSDLVNSENVCPICSKNFRSPNVLLKHAKHCNGVINLEAFKSPKRKKIDNTSEVVDESKTDDLSISQESQEFNTIDADSSVDSSNLENKEINDSINSTSDVLNDTSTIEIIVPENSKCTPEPEILTSADKVEDKSLEIITIDDEKLPENDPVDTSTKQDVSEESNVTSKSSKLDDTKSPKGKLTKKLDTANKLSPMSRLSKFLSTKPPVNKVIKCEICNKTFRQLAHMVYHRNKHDEEKLNDPIPQEKPVPKPIEQQVQKSECDAILKCEICQKGFRKLHHLVAHREVHEVKSRRASTVSVKSEPEAGFRCDTCDKSFRKLHYLVAHRETHLSESTEISSKQTTEVKSTEKEVEKDDATCTGCGKSFRKRHHMIEHRDTHCSPKKKRLSEDSEFSENNVRLSITSSTSDETNNCGICGKSYRKLHHMIEHRESHAEAVVKSEHRVSTRFSSPDSLNTKDIIHECSKCYMVFPNVNSLNKHTENCTRKKIFGKKPVINANSKSNKSLVKNGNSETSKVSKLPKFEDIEKPSTSKVVKSKPTTQKSDVGTSVVKNITRTKFKSSENDVKYKINPAFKGKVENSEPSNSSTKLKSKPNDSILAGLKVPSARMLKTIIEETTVKYSFPKSPKAVGRPKNDSKLPKSTLRKSVVTKTNNKPTLTIRRRSLGGRKSLEIKRTIREPETRQKLPRKSTASIDTNKSMKNTKESCKCDCGKQFDNNTLLKKHMDTEHTPPKSYKCHTCGASVRTAIQFSKHKKTHEDSHSGQSVQNKKSRSSAASASTSMKSKGATPRRDTKKLKDAHRGVPLSDKMKKAFAGSKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -