Basic Information

Insect: Hydropsyche tenuis
Gene Symbol: -
Assembly: GCA_009617725.1
Location: VTON01000077.1:697063-701572[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0061 0.45 11.1 1.0 3 23 59 80 58 80 0.96

2 23 0.29 21 5.8 1.4 2 21 381 400 380 401 0.91

3 23 5.2 3.8e+02 1.8 0.5 1 21 409 429 409 430 0.93

4 23 0.013 0.94 10.1 1.2 2 21 513 532 512 533 0.94

5 23 0.19 14 6.4 0.1 3 23 542 563 540 563 0.94

6 23 4e-05 0.0029 18.0 1.6 2 23 580 602 579 602 0.96

7 23 0.16 12 6.6 3.0 1 23 608 631 608 631 0.90

8 23 0.0034 0.25 11.9 0.1 1 23 653 676 653 677 0.96

9 23 0.003 0.22 12.1 0.4 1 23 681 703 681 703 0.98

10 23 0.79 58 4.4 0.7 1 23 709 732 709 732 0.92

11 23 0.00062 0.046 14.2 1.2 1 23 746 768 746 768 0.98

12 23 0.012 0.85 10.2 3.2 1 23 814 837 814 837 0.96

13 23 4.7e-05 0.0034 17.7 0.9 1 23 899 922 899 922 0.98

14 23 0.00094 0.069 13.6 1.1 2 23 956 978 955 978 0.96

15 23 0.0028 0.2 12.2 0.1 2 23 984 1006 983 1006 0.96

16 23 0.0015 0.11 13.0 0.5 1 23 1053 1075 1053 1075 0.94

17 23 0.00011 0.0082 16.5 0.3 1 23 1083 1105 1083 1105 0.94

18 23 0.0015 0.11 13.0 0.2 3 23 1208 1229 1207 1229 0.90

19 23 1.7e-06 0.00013 22.2 1.4 3 23 1236 1256 1235 1256 0.98

20 23 0.0005 0.037 14.5 3.2 1 23 1287 1309 1287 1310 0.96

21 23 0.82 61 4.4 0.2 1 19 1339 1357 1339 1358 0.86

22 23 0.00019 0.014 15.8 2.9 1 23 1360 1382 1360 1383 0.96

23 23 0.00031 0.023 15.1 1.7 1 23 1391 1414 1391 1414 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0061	0.45	11.1	1.0	3	23	59	80	58	80	0.96
2	23	0.29	21	5.8	1.4	2	21	381	400	380	401	0.91
3	23	5.2	3.8e+02	1.8	0.5	1	21	409	429	409	430	0.93
4	23	0.013	0.94	10.1	1.2	2	21	513	532	512	533	0.94
5	23	0.19	14	6.4	0.1	3	23	542	563	540	563	0.94
6	23	4e-05	0.0029	18.0	1.6	2	23	580	602	579	602	0.96
7	23	0.16	12	6.6	3.0	1	23	608	631	608	631	0.90
8	23	0.0034	0.25	11.9	0.1	1	23	653	676	653	677	0.96
9	23	0.003	0.22	12.1	0.4	1	23	681	703	681	703	0.98
10	23	0.79	58	4.4	0.7	1	23	709	732	709	732	0.92
11	23	0.00062	0.046	14.2	1.2	1	23	746	768	746	768	0.98
12	23	0.012	0.85	10.2	3.2	1	23	814	837	814	837	0.96
13	23	4.7e-05	0.0034	17.7	0.9	1	23	899	922	899	922	0.98
14	23	0.00094	0.069	13.6	1.1	2	23	956	978	955	978	0.96
15	23	0.0028	0.2	12.2	0.1	2	23	984	1006	983	1006	0.96
16	23	0.0015	0.11	13.0	0.5	1	23	1053	1075	1053	1075	0.94
17	23	0.00011	0.0082	16.5	0.3	1	23	1083	1105	1083	1105	0.94
18	23	0.0015	0.11	13.0	0.2	3	23	1208	1229	1207	1229	0.90
19	23	1.7e-06	0.00013	22.2	1.4	3	23	1236	1256	1235	1256	0.98
20	23	0.0005	0.037	14.5	3.2	1	23	1287	1309	1287	1310	0.96
21	23	0.82	61	4.4	0.2	1	19	1339	1357	1339	1358	0.86
22	23	0.00019	0.014	15.8	2.9	1	23	1360	1382	1360	1383	0.96
23	23	0.00031	0.023	15.1	1.7	1	23	1391	1414	1391	1414	0.96

Sequence Information

Coding Sequence: ATGTTAAGTTTTGGAAatcttttacaattagatttgccatcgttaaatttattgatttttGAAAATGAAGATGAGTACGATATGTCAATTGGATCGATCATCACGCCTGAAGTGCATATGCAGCCTGAGGTGGAACATCGACCTGTGCCTGTGGAACATTTAGCATCTAAAGACTGTTTGGTATGCGGACGTGCATACCGGTATTCTCACAATGCCCGCCGCCACGAGTTGACTTCCCATGGTTACGATCGTTATACAAACAAGATCGAGCCCAATGCAGTTCTAAACAACTCTAGAACAAACAATCACAATTCCAAGGCAAGGTTCTCCCAAAACTCCTTAAATAACAGAATGGGTCTGATGCAGTCTCACTCTGGAATGGATATGCAATCGCAATCTGCTGAACCTGAAATTCTTAAGTCGCTATTGACAGCAAGGCAACATGAAGCCCTTTCggaatctgaaaatattcattctagGTCTGAAAGTCCTGAATCGGATGTGTCTGATTCAGAACTACAGCAATATCAAGTCGAAGCTATTATATCTGAACCAGATACATATATGCATAATTCTGGAGCATATACGCAAAATTCTGACGCATATATGCATAATTCTGATTCATCAGATGACGAGAAAGATGTCCAGATGGGACAGTCTCCAAGATCTAATACTGACGTTGATTATGATGTTGATTTAGAATTGACTTCTCAACTAGATATAAATAAGATTATCGGTGTCGATGGAGACGATTATGAAGAAGAGTATAATGATGCAAACGAAGAGAATCTGGAATATGACGAGGAAGATCAGAATGTTGCAGAGAATGTTGAAAGCGAAGTTGTTTGTTCAGCTGATGTCGAatcgaataatattgaaatggagCATGAGAATGACAATCAGTTGCAAGAAGAGCAAGAAGATGACGTTCCTGTGTCTCTTGTGCCTATAGTTGAACTAAACGAAAATGCTAATATGAATAATGTCGGCAGTGAAGATAGTGAGTCAGAAGACGAATCCCCTGTATCCAACCAATCAGCTATATTAAATAACGTgcatgataataattttaccaTTAGTTCGTCCCAAAGAGATTTTATTGCTCAATTCAGGGATGTGATCGAACAGATAAACACAATGAGGTGTAAATGCTGTGATAAAGAATTCCCACGAAGGAAGGCTGTTATTCAACATTTGCAAAAAAGTGGTTCAAGAATTCCAAAACATACATGTTATAGTtgtattttatcttttaataatatcggTGCATTTTTGAGTCATATGCGTTACAATTCATGCAATGACACATggaaattgatttatcaagATGAAATACCTGAAAGTATGGTCGTAGATGAATATCCACATATGGATTCACAAGATAGCTCCGAAGGTGTATTCAAATCACAATACAAAGATGTTTTGAATTACAGGTCATATGCTTGTAAAATCTGCTCTGCGAAACATCAACTTAAACcatttattatgaaacatGTTTTAGATGTTCACGAAAGTGTAACTAGATCTCTTCCCCTTACatgttttaattgtaaatataaatttacagcAAGCCGACTTTTGAAAAAGCATATTCAAAATGGTGAATGTACTGTAGATGTAGCATGCGAATTGTGTTCAGCGAGATTCAATTCTACTCAAGATTTCAACGAACATGTACTAATCATGCATATGGAAGCTTTTGCTAATCAGTCTTTCGAGCCTAACGGAAGGTCTACATATTGCGCCATTTGTAAAAATAGTTTctcaaattatcataatttagtCAAGCACATGAGAATTGTACACAATGAAGGGCAAGTACATAATTGCCAACATTGTGACGCTAAATTTATGGACATTGGTGATTTAAATCAACATGTTTATCATGAACACACAGAACAACTCAACGGACATGAAGAAGAAACTGAAATGAAAGAAGAAATAACTACTTACAATTATTCATGCACCGATTGCGATGCAGTCTTCGAAACTGTCGACGGTTGGACTGATCATCAAATTATCGTGCATCATCACGTAGCGTATGCATGTAATCAATGTAACAAAAAGTTTTGGGATGAAAACGAATTGGAAGAACACAAAATGACCCATATGAAGATGCAACCTTACAGATGTATGTTGTGTCCGAGTTCCTTTGGCTCCACACAAAAATTGTCAGAACATGTTACGCAATTCCATCAAGAAACTGCCATGCATGACAAGTCATACGAGAGCCAATTTTATTGTGGTATTTGCATCCGATCATTCAAAAGTCGACAAGCGTTTTCAAATCATATGCGTATTCATGCTAAAATTCCAACTACTAATCGTCGTGCTGGAGAAGTGAACAAGCGTTCTGATACACAACCAAAACCGCATCAGGTGCACACTCAAATCCCACAGTCGTCTGCAAAACCGTTGAAAATCGTAAATCCAGCTCCGCATTCTTGTGATATTTGTGGGAAAGGATTTTTGCATAAGAAGAACATATGgaagcataaaaaaatattgcattctAATATAGTCAATAATAAATCTAAAGAAAATTCTGAACACATTCAAGCCAAAAGTATTTCTACAGAAGAAGAAGATTATACTAACGATGGTCATTCTCGACTTAGCATACCACAATTTGATAGTTTCATACCATTAGGATACGATCAGCTTGATAATAGTGGATCTGAAGGTAATTTAACATATCAATGTGATCTTTGTGATAAAAAGTTTGCTGTCAAAAGTAGCATATGGAAACACAAAAGAGTCAAACATGGTGTTATCAATCCAATGACACCGGAAGCTACTAGAATAGAACCAATCAAgcaagaaataataaaaacagaaacaaataaaacagaaGTGGCCAGAACGAGCTGTACGATttgtaaaatcaattttacagATAAGAAAGCATACTATCGTCATAGAAAAATTGCACACAAAGCCAGCATTCAAGTATGTAAAATATGTGGCATAACTTTGAATACGTCGATTGAGTTGTTTGAGCATTTACAAAGCTCGCATGCAAAAGAATTACTGGGTTATAATGCTAGTCAAGGAAAGCCTCAAAAGAAAGTACAAATTTCGAGACCGAATTTATCCAGTGATGAAGAGGAGGTAGGACAAATGTTGAGTCATTCCAGTAGTCGCAAAGTACCCAAATATTCATGTGAAACTTGTGGCAAAGGTTTCAACGATGTTATTGCTTTGCAAAATCATAATTGTGCACACCGTGGATCTAAATCTGAAACTTACGATTGTGAAATTTGCAACAAGAGCTATACATCAATCTCGGCTTTAAAGAGCCACCGAGGATGGCATTTGCGATCTCCCGATGGAAGAGCAGCATTTAGCAATTCTGGCCTATGGATGCCTCAAAACAAAGTAACTAACAAAGTGAGTAAACATGAAGTATTAGAAACGGTGCGTGCGAAGaatcaattttcccaaaaagaAATATCACCTTtacaaattaaacgaaaactaCCACCCGATGTTCAAGTTACTGTGTtaaagaaaaagaaattttcgaatgacaATTCGATGGAACAGTCATCGATAGGATCTAACGATGTACAACTACCACCTGTGAATCATCAAATAAACCCAGTCAACGATGATCGTTATTGCGAACCTTGTAATAAAGTATTCACTAAAAAGGCTGCATATCAAAGGCACATGGACGAAGTTCACAAACCAAACGCTGTGTTTTGTCCCATATGTGCTAAAAGCTTTACGAGAAAATCTACATTATTGCAACACATGCAAAAACATGACACAGGCGATATATCAGAGGCACTCGATGGAGACGACAGTGACGATGATCAAGAAATGAGTAGACCAGAACCTAGACCCCCTCCTATGTATAGATGCGAAGTATGTAGCCTACAGTATAGTTCATCGAAAGCCTTGAGACGGCACAGGTTGAAACATCACAGAGACGCTGACAAAATGAGTCAACACATGAACGAAGGTGTCGCGCAGAGGTTACCCGAATCGAACGAAAGGGTTGAAAAAGAGTACAAATGTAGTATGTGCGAGGAAGATTTTGAAACGGAAGAGGAAGCGTATAACCATTCTCATTACAGCTGCTCGATATGCAGAATGTACTTCTCTCAAAATCAATACCTGGTGGAGCACATGCAGACACATCATTCGACCAGCGAGCAGATGTACTTCCCTTGTGATAAATGCGAGAGGTTTTACATGAACAAGAAGAGTCTTCAGAGGCATATCGAGTCTTTCCATTGA
Protein Sequence: MLSFGNLLQLDLPSLNLLIFENEDEYDMSIGSIITPEVHMQPEVEHRPVPVEHLASKDCLVCGRAYRYSHNARRHELTSHGYDRYTNKIEPNAVLNNSRTNNHNSKARFSQNSLNNRMGLMQSHSGMDMQSQSAEPEILKSLLTARQHEALSESENIHSRSESPESDVSDSELQQYQVEAIISEPDTYMHNSGAYTQNSDAYMHNSDSSDDEKDVQMGQSPRSNTDVDYDVDLELTSQLDINKIIGVDGDDYEEEYNDANEENLEYDEEDQNVAENVESEVVCSADVESNNIEMEHENDNQLQEEQEDDVPVSLVPIVELNENANMNNVGSEDSESEDESPVSNQSAILNNVHDNNFTISSSQRDFIAQFRDVIEQINTMRCKCCDKEFPRRKAVIQHLQKSGSRIPKHTCYSCILSFNNIGAFLSHMRYNSCNDTWKLIYQDEIPESMVVDEYPHMDSQDSSEGVFKSQYKDVLNYRSYACKICSAKHQLKPFIMKHVLDVHESVTRSLPLTCFNCKYKFTASRLLKKHIQNGECTVDVACELCSARFNSTQDFNEHVLIMHMEAFANQSFEPNGRSTYCAICKNSFSNYHNLVKHMRIVHNEGQVHNCQHCDAKFMDIGDLNQHVYHEHTEQLNGHEEETEMKEEITTYNYSCTDCDAVFETVDGWTDHQIIVHHHVAYACNQCNKKFWDENELEEHKMTHMKMQPYRCMLCPSSFGSTQKLSEHVTQFHQETAMHDKSYESQFYCGICIRSFKSRQAFSNHMRIHAKIPTTNRRAGEVNKRSDTQPKPHQVHTQIPQSSAKPLKIVNPAPHSCDICGKGFLHKKNIWKHKKILHSNIVNNKSKENSEHIQAKSISTEEEDYTNDGHSRLSIPQFDSFIPLGYDQLDNSGSEGNLTYQCDLCDKKFAVKSSIWKHKRVKHGVINPMTPEATRIEPIKQEIIKTETNKTEVARTSCTICKINFTDKKAYYRHRKIAHKASIQVCKICGITLNTSIELFEHLQSSHAKELLGYNASQGKPQKKVQISRPNLSSDEEEVGQMLSHSSSRKVPKYSCETCGKGFNDVIALQNHNCAHRGSKSETYDCEICNKSYTSISALKSHRGWHLRSPDGRAAFSNSGLWMPQNKVTNKVSKHEVLETVRAKNQFSQKEISPLQIKRKLPPDVQVTVLKKKKFSNDNSMEQSSIGSNDVQLPPVNHQINPVNDDRYCEPCNKVFTKKAAYQRHMDEVHKPNAVFCPICAKSFTRKSTLLQHMQKHDTGDISEALDGDDSDDDQEMSRPEPRPPPMYRCEVCSLQYSSSKALRRHRLKHHRDADKMSQHMNEGVAQRLPESNERVEKEYKCSMCEEDFETEEEAYNHSHYSCSICRMYFSQNQYLVEHMQTHHSTSEQMYFPCDKCERFYMNKKSLQRHIESFH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00815275;
90% Identity: iTF_00815275;
80% Identity: -