Basic Information

Insect: Hydropsyche tenuis
Gene Symbol: -
Assembly: GCA_009617725.1
Location: VTON01000015.1:1162181-1168002[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0013 2.2 8.4 4.0 18 38 35 56 27 58 0.85

2 14 0.029 46 4.1 4.3 6 35 52 81 51 85 0.75

3 14 0.0082 13 5.9 3.0 6 33 76 107 74 113 0.72

4 14 0.019 30 4.7 4.0 5 38 107 140 104 141 0.77

5 14 0.00084 1.3 9.0 1.7 5 38 135 168 131 175 0.85

6 14 0.0069 11 6.1 5.7 8 38 166 196 161 202 0.81

7 14 0.019 30 4.7 5.5 17 38 202 224 192 225 0.81

8 14 0.00011 0.17 11.9 3.8 5 38 219 252 217 253 0.90

9 14 0.13 2e+02 2.1 1.4 18 37 259 275 253 281 0.71

10 14 0.014 23 5.1 2.7 10 30 280 300 274 307 0.72

11 14 7.5e-05 0.12 12.4 2.9 18 38 332 353 323 360 0.91

12 14 0.00027 0.44 10.6 2.8 17 43 359 382 354 383 0.90

13 14 2.2 3.5e+03 -1.9 0.1 18 31 421 435 420 444 0.71

14 14 7.5e-05 0.12 12.4 2.3 18 41 449 469 437 470 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0013	2.2	8.4	4.0	18	38	35	56	27	58	0.85
2	14	0.029	46	4.1	4.3	6	35	52	81	51	85	0.75
3	14	0.0082	13	5.9	3.0	6	33	76	107	74	113	0.72
4	14	0.019	30	4.7	4.0	5	38	107	140	104	141	0.77
5	14	0.00084	1.3	9.0	1.7	5	38	135	168	131	175	0.85
6	14	0.0069	11	6.1	5.7	8	38	166	196	161	202	0.81
7	14	0.019	30	4.7	5.5	17	38	202	224	192	225	0.81
8	14	0.00011	0.17	11.9	3.8	5	38	219	252	217	253	0.90
9	14	0.13	2e+02	2.1	1.4	18	37	259	275	253	281	0.71
10	14	0.014	23	5.1	2.7	10	30	280	300	274	307	0.72
11	14	7.5e-05	0.12	12.4	2.9	18	38	332	353	323	360	0.91
12	14	0.00027	0.44	10.6	2.8	17	43	359	382	354	383	0.90
13	14	2.2	3.5e+03	-1.9	0.1	18	31	421	435	420	444	0.71
14	14	7.5e-05	0.12	12.4	2.3	18	41	449	469	437	470	0.89

Sequence Information

Coding Sequence: ATGGAGCCCGTCGACATCAAGCCCATCATCTTCGTCGACGTGCTCACGTCCGAGGACATGCTCGTCGTGGAGCCCCCGCGCGCCAAGGGCGAAACTCCACACCATTGCGAAATATGCGGAAAGAAATATACCCGTAAAGAGCATCTGGCTAATCACATGCGCTCACACACTAACGATACACCGTTTCGATGTGAGATTTGCACCAAGTCTTTTACAAGAAAAGAGCACTTCACCAATCACATCATGTGGCACACCGgTGAAACTCCACACCGATGCGATTTTTGCTCGAAAACTTTCACCCGTAAAGAGCACTTACTAAATCATGTGCGGCAACACACAGGTGAATCGCCACATCGATGCGCGTACTGCTCCAAGTCCTTTACGAGGAGAGAACATCTCGTCAACCACGTTCGTCAACATACTGGTGAAACACCGTTCAGATGTACCTATTGTCCCAAAGCATTTACCCGGAAAGATCATTTAGTGAATCATGTGCGGCAGCATACGGGAGAATCTCCTCACAAGTGCACTTATTGTTCTAAGTCATTTACGCGTAAAGAACACTTGACTAATCACGTCCGACAGCATACAGGAGAATCTCCCCACCGTTGTGCCTACTGCTCAAAGTCTTTTACGAGAAAAGAACATCTCACCAATCACGTCAGGAAACACACGGGAGAGACCCCTTACACATGCAGCTATTGTCCTAAAGCTTTCAGTAGGAAAGAGCATCTCACTAATCATATCAGGAGACATACGGGCGAGACCCCATACAGCTGTGCATACTGCTTGAAGTACTTCACCCGAAAGGAACATTTAAACAATCACATCAGGAAACATACGGGCGAGTCTCCATACACCTGCACCTACTGTTCCAAGGCTTTCACCAGAAAAGAACACTTAAATAACCACGTTAGTTTGAAAAAGAAATCCGCATTTTTAACAGATTACATATTATccacaattagaatacacacTGGCGAATCACCGCATCGATGTGAGTTTTGTCAAAAGACTTTCACCAGAAAAGAGCATTTAACGAATCATCTGCGGCAACACACCGGAGAGACACCTCACAGATGTAACGTATGCAATAAACCTTTCACGAGAAAAGAACACCTAATAAATCATATGACgAGATTTCACACAGGTGAACGTCCATTTTCTTGTTTGGAATGTGGCAAATCTTTCCCGCTCAAAGGTAACCTGTTGTTCCATCAACGTTCTCACAATAAGGGAGTTCTCGCTGCACGTCCTTACCGGTGTGATCTTTGTCCGAAAGACTTCATTGGAAAAGGACATTTGGTTTCGCATAGACGGTCGCACACGGGGGACAAACCTCACTCGTGCGAACATTGTGGAAAAACTTTTGTTGAGAAATCGAATATGGCGAGACATATGCGGAAACACGAGCTCGAAGAAGCGGGTGCTGCTAGTGTTATGGGAGAAGATGGCGATTCAACTTCTACCCCTACGGCGATTGCTTCTTCGGCTGCAGGCACCGTTGCTAATGCTACACAACAAAATATGCCAATAATGCATATGACAGGACAAGTGATATCTGAAGATGGCCAAGATCAAACAACATCGGATATCCATCATCAGAATCAACAGCAGTCAGTCTCCCACCATGCAGTGGTGGTTAATTATTGA
Protein Sequence: MEPVDIKPIIFVDVLTSEDMLVVEPPRAKGETPHHCEICGKKYTRKEHLANHMRSHTNDTPFRCEICTKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRREHLVNHVRQHTGETPFRCTYCPKAFTRKDHLVNHVRQHTGESPHKCTYCSKSFTRKEHLTNHVRQHTGESPHRCAYCSKSFTRKEHLTNHVRKHTGETPYTCSYCPKAFSRKEHLTNHIRRHTGETPYSCAYCLKYFTRKEHLNNHIRKHTGESPYTCTYCSKAFTRKEHLNNHVSLKKKSAFLTDYILSTIRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHRCNVCNKPFTRKEHLINHMTRFHTGERPFSCLECGKSFPLKGNLLFHQRSHNKGVLAARPYRCDLCPKDFIGKGHLVSHRRSHTGDKPHSCEHCGKTFVEKSNMARHMRKHELEEAGAASVMGEDGDSTSTPTAIASSAAGTVANATQQNMPIMHMTGQVISEDGQDQTTSDIHHQNQQQSVSHHAVVVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00815959;
90% Identity: iTF_00815959;
80% Identity: iTF_00815959;