Hten008939.1
Basic Information
- Insect
- Hydropsyche tenuis
- Gene Symbol
- bab1
- Assembly
- GCA_009617725.1
- Location
- VTON01000116.1:204032-214385[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-18 9.1e-15 54.1 0.0 1 43 62 105 62 107 0.95
Sequence Information
- Coding Sequence
- atgcGTCCTCGTTTCGCAAAACTCTTAGAAAATAGCCATGGATGGCTCGGTGCTTCTACATCGTCTCTTGCCGTAGACAGTTACCAGTATCAGTTGCAGTCAATGTGGCAAAAATGCTGGAACACCAACCAATCGTTGGTGCACAACTTGCGGTTCAGAGAGCGCGGTCCCCTCAAATCATGGAGACCAGAGACCATGGCCGAAGCTATCTTCTCCGTACTGAAAGAAGGACTCTCCCTGTCCCAAGCAGCCAGAAAATACGACATACCATATCCCACATTCGTGTTGTACGCCAACCGAGTCCACAACATGCTGGGCCCGAGTGCTGATGGAGCAGCAGAACTACGACCCAAGGGTAGAGGACGTCCTCAGAGAATCCTGTTAGGTGTGTGGCCCGATGAGCACATCAGGGGTGTTATCAGAGCCGTGGTCTTCAGGGACTCTCACAATTCTCATCACATCAAGGAAGAACCACTGCCCTCGTATCCTGCACTATctGAAGGAATGCAAGTACAAGCATATGGCAACGGAACTGAAGGTAGCATGTCTCCTGAATcggcagcagcagcagcagcgaTGGCAGCAGTGGCCCATGGGCTCCGTCAACAAATGTGCAGCATGGTAGCAGCAGCTCACCATGCGCCCCCAGCAGTAGCTCTGTCCCCTTGCTTGGGGTCCCCGCCCCCGCCTCCAGCACCTGCGCCCCCCCTGCCGGTGGAGCCTCCGCAGATGCACCTGGCCCTCCCAGGCAATGGGTCTGAGCATCACTTCCGTCCGTTCGCGCCTCCGCCCCACCACGAAGGTTACTTCCGCGAGGATCTGGACGCGGCTGATGTGTCGCCGTCCAGGCTGGTGCTCACAGAGCCGGAGCAGCTGACTGTGAAGCTGGAGCCGTTCGGAGAGCCAAGAATCTAA
- Protein Sequence
- MRPRFAKLLENSHGWLGASTSSLAVDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGAAELRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHNSHHIKEEPLPSYPALSEGMQVQAYGNGTEGSMSPESAAAAAAMAAVAHGLRQQMCSMVAAAHHAPPAVALSPCLGSPPPPPAPAPPLPVEPPQMHLALPGNGSEHHFRPFAPPPHHEGYFREDLDAADVSPSRLVLTEPEQLTVKLEPFGEPRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815025;
- 90% Identity
- -
- 80% Identity
- -