Basic Information

Insect: Hydropsyche betteni
Gene Symbol: stc
Assembly: GCA_028571205.2
Location: JAOXNN020226297.1:10023-13637[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.6 2.5e+05 -3.8 1.6 15 19 470 474 469 474 0.81

2 11 0.04 6.1e+03 1.3 0.2 4 10 504 510 502 512 0.92

3 11 5.1e-06 0.79 13.8 12.5 3 18 519 534 516 535 0.92

4 11 2.5e-08 0.0038 21.2 13.9 3 19 573 589 571 589 0.91

5 11 3.7e-06 0.56 14.2 14.5 1 18 630 647 630 648 0.98

6 11 8.3e-07 0.13 16.3 17.4 2 19 695 712 690 712 0.93

7 11 0.0011 1.7e+02 6.3 7.7 1 11 752 762 752 763 0.95

8 11 0.11 1.6e+04 -0.0 0.6 4 10 767 773 766 773 0.91

9 11 6.5e-10 9.9e-05 26.2 12.9 1 19 779 797 779 797 0.98

10 11 1.7 2.7e+05 -3.9 0.9 6 10 826 830 825 830 0.84

11 11 2 3.1e+05 -7.2 13.1 1 19 836 855 836 855 0.71

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.6	2.5e+05	-3.8	1.6	15	19	470	474	469	474	0.81
2	11	0.04	6.1e+03	1.3	0.2	4	10	504	510	502	512	0.92
3	11	5.1e-06	0.79	13.8	12.5	3	18	519	534	516	535	0.92
4	11	2.5e-08	0.0038	21.2	13.9	3	19	573	589	571	589	0.91
5	11	3.7e-06	0.56	14.2	14.5	1	18	630	647	630	648	0.98
6	11	8.3e-07	0.13	16.3	17.4	2	19	695	712	690	712	0.93
7	11	0.0011	1.7e+02	6.3	7.7	1	11	752	762	752	763	0.95
8	11	0.11	1.6e+04	-0.0	0.6	4	10	767	773	766	773	0.91
9	11	6.5e-10	9.9e-05	26.2	12.9	1	19	779	797	779	797	0.98
10	11	1.7	2.7e+05	-3.9	0.9	6	10	826	830	825	830	0.84
11	11	2	3.1e+05	-7.2	13.1	1	19	836	855	836	855	0.71

Sequence Information

Coding Sequence: ATGGGAGAATGGAACTATAATCAGTATCCTCCCGGTTACGCTTGGAACAATAGCAGAGAGAATTCTAATCGTCCCGCGCCGGACGTGAATTATTATCAGCGCAACACTGCGAACAATCTACCTCAACAATACATCGGCTTTCAAGACTTCATCAATCAATATCAACAATCCGGTTCATATCAGGCGTATAACAATAACGGATACCAAAATCAACACGTCAACATACATTACAATCATCGTTATCCTGTTGTCGCGAACCCagacatttcaaattatcatttgcaAAACGATCAACGCCGCAGCTACGGTGCATCGCACAATTCTGAAAATGGACagaaaaaattccatcaaaaaaatactaatttgcCCGCTGGGAGTTCAAGAGTGCCTTTTGAGTCGGTAGCCAGCCACAATGTTGGTTCATGTCTCGGTAATCATGCATCGAGTTCTGCTCCTCAATACCATGAAGTTCCCGTAAACGATTCAATGtccaatcaatattttcaaactacgCCTGCCGAATATAATAtagcttcaaattcaaaattgactGCAACCGCTTCGGAATTCGTACCTCAAGGTTCCAAAACTGATTCGAAAACTTTCCACAATTCGAAAATCGTATCGAACAGTAAAAGTCAcgataataatagaaaagaCGAGAAATTAAACTCTCCTTCGcgcaataattataaatctaaaaatttaggGAGCGATTCAAATAGAAATACTAATTGGAGAAGAAGAGACGATGAAGAGGCTTCGTTTTCGGGAACGGCCAATATTGCACAGGAAAATAATCAGACGGATAGAAATTCTGTAAATTCAAACGATAGTCAGCAAGGTTCGAGCCGCGGAGATGCATCCAACTACAGaccaaaaaaagaaacgttCCATAACAATAAGCCGAAATATAATGTAGAAagcaattcaaattattacgaAGGGAACAGAAATTACAGAAATTCTAAAGTATTCAACTCGAATTCGAGCCGACAAAATTACGAAAACGGATCAAAATATCCTCAAAAAAAGAACACGACATACATTTCTAATGAAACGTTCCgtcacaaaaattataaaaaaaatgaccagTATGTCGATAAAGAAAACATACAGGAAATTGATGACTCGAGTAATGGTacgtttaagaaaaataaaactgccAACACCAAAACTTCGGCAAAGAGAGACATCGACATGAGTAAAGATATCGACGGAGCGGGAGTCTCCCAAAGGGAAAGGTTGACTGAGCAATTAGATAAAGGCATATTAGAGTGTTTAGTTTGTTGTGAACTTATTAGACAAATTGATAGTGTTTGGTCGTGTAACAATTGTTTTCATGttcttcatttaaaatgtattaaaaaatgggCCAAGAGCAGCATTAcagaGGATTTATGGAGATGTCCAGCTTGTCAAAACAACAACTCTATTGTGCCAATGGAATATCGGTGTTTTTGCGGTAAACAACACAACCCTGAATGGACACGTGGTGGCGATAGCGCTCATACGTGTGGAGATATTTGTGGTCGTTTACCTTCAGGCTGTTTACGCCATCCGTGCACTCTCTTGTGTCATGCTGGTCCATGTCCCCAATGTGAAGCTGTTGTGAAAAAgaaaTGTGAATGCGGTGCCACCACCCGAGCTATGAGATGTTCACATAATCAGCCGCTGGTTTGTGACAATATTTGCAGGAAACCGCTAAATTGCCAAGTTCATACGTGTCAACAAAAGTGTCATTCTGGTGCTTGCCAACCATGTTCTGAAACTATCGATcaacaatgttaCTGTACAAGATCTGTGAAAAGAACTCTTCCTTGTGATGTTGAAACAGTTGGTGTATCCAATTTTAGCTGCGGCGAAGTTTGTAGCAATAAACTCGACTGTGGTAAGCATCATTGCACTAAAATTTGCCACGGAGGATTGTGCGATGAATGCGCTTTGTTACcagaaaatgtcaaaaactGTCCCTGTGGTcaaactatattaacttcaaaacaaaaaagggaAAGTTGTTTGGATCCAGTTCCTTTGTGTAAAAAGATTTGTTCAAAACCGTTTCAGTGTGGGCCTCCTGAAGGCAGACACAAATGTAAAAGTGAATGCCATCATGggGATTGCCCACCGTGCTCCGGTAAAACATCAGTGTCTTGTAGATGCGGTCATCTGAACAAAAACCTGAAGTGTACTGATTTggaaaaagataaagataacgtcagatgtggaaaaaaatgttcaaagaaacaaTCTTGTGGAAGACATCGCTGCAAAACTTTATGCTGTGTAGATGCAGAACATCGCTGCATGCTACCTTGCAATCGTTCGCTTTCATGTGGAATCCATCGATGCGAAGATACTTGCCACAGTGGTCACTGTGATCCATGCTGGAGAACTAgTTTTGACGAGTTACGTTGTCGCTGTGGAGAGGCCGTCATGTATCCACCGATTCCCTGTGGAACTCGCCCTCCTGCATGTACCAAACCTTGCACTGTGCCAAGACCTTGTGGACATCCACCGCTACATGTTTGTCATCCTGCACCTTCAGCATGTCCTCCTTGTACCGTTCTCACAACAACTTACTGCCATGGCCGCCACAAGGTTTTCATTTAG
Protein Sequence: MGEWNYNQYPPGYAWNNSRENSNRPAPDVNYYQRNTANNLPQQYIGFQDFINQYQQSGSYQAYNNNGYQNQHVNIHYNHRYPVVANPDISNYHLQNDQRRSYGASHNSENGQKKFHQKNTNLPAGSSRVPFESVASHNVGSCLGNHASSSAPQYHEVPVNDSMSNQYFQTTPAEYNIASNSKLTATASEFVPQGSKTDSKTFHNSKIVSNSKSHDNNRKDEKLNSPSRNNYKSKNLGSDSNRNTNWRRRDDEEASFSGTANIAQENNQTDRNSVNSNDSQQGSSRGDASNYRPKKETFHNNKPKYNVESNSNYYEGNRNYRNSKVFNSNSSRQNYENGSKYPQKKNTTYISNETFRHKNYKKNDQYVDKENIQEIDDSSNGTFKKNKTANTKTSAKRDIDMSKDIDGAGVSQRERLTEQLDKGILECLVCCELIRQIDSVWSCNNCFHVLHLKCIKKWAKSSITEDLWRCPACQNNNSIVPMEYRCFCGKQHNPEWTRGGDSAHTCGDICGRLPSGCLRHPCTLLCHAGPCPQCEAVVKKKCECGATTRAMRCSHNQPLVCDNICRKPLNCQVHTCQQKCHSGACQPCSETIDQQCYCTRSVKRTLPCDVETVGVSNFSCGEVCSNKLDCGKHHCTKICHGGLCDECALLPENVKNCPCGQTILTSKQKRESCLDPVPLCKKICSKPFQCGPPEGRHKCKSECHHGDCPPCSGKTSVSCRCGHLNKNLKCTDLEKDKDNVRCGKKCSKKQSCGRHRCKTLCCVDAEHRCMLPCNRSLSCGIHRCEDTCHSGHCDPCWRTSFDELRCRCGEAVMYPPIPCGTRPPACTKPCTVPRPCGHPPLHVCHPAPSACPPCTVLTTTYCHGRHKVFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -