Hbet005944.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- nfxl1
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020000033.1:1841518-1845140[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 3.1e+05 -7.9 5.6 15 19 179 183 178 183 0.81 2 15 0.12 1.8e+04 -0.2 0.3 4 10 214 220 213 220 0.95 3 15 6.5e-08 0.01 19.8 15.7 1 19 228 245 228 245 0.99 4 15 1.4e-08 0.0021 22.0 10.5 3 19 283 299 281 299 0.92 5 15 3.2e-06 0.49 14.4 8.4 1 19 334 352 334 352 0.97 6 15 1.4e-07 0.022 18.7 15.3 1 18 387 404 387 405 0.97 7 15 0.33 5e+04 -1.6 0.2 8 12 421 425 420 426 0.76 8 15 9.1e-09 0.0014 22.5 16.4 1 18 439 456 439 457 0.98 9 15 3.8e-06 0.59 14.2 15.3 3 19 468 484 460 484 0.86 10 15 6.8e-05 10 10.2 5.3 9 19 532 542 530 542 0.91 11 15 0.00056 86 7.2 5.8 1 11 551 560 551 561 0.96 12 15 0.66 1e+05 -2.6 5.8 14 19 589 594 589 594 0.90 13 15 0.013 2.1e+03 2.8 5.9 1 11 630 640 624 641 0.90 14 15 0.02 3.1e+03 2.3 17.0 3 19 669 685 668 685 0.93 15 15 2.4e-06 0.36 14.8 11.7 1 18 730 747 730 748 0.90
Sequence Information
- Coding Sequence
- ATGGGGGATCGCTGGAAACACAATCGGCCTTCTGAAAGTGCGTGGTCTGGaagaggcgctggccgcggggcATGGAAGAACAATCAGAATTCAAAACCTCCGAATTCAAACGCAACTAGCAATAATATAGTCCCGGCCAAATTTAAAGAAGCCAGTGATAGTATGTTAGCATCTGTTCAAAAGCATATATCTAATTATGAATCATCGTCGGACGAGGAAGATCTAGAGGAAGCTAGCATTTTAGattctgTCACGAGCAAATATTCGAGTCAAGGTGAAGATATAAGTTTAGGTAAAACAAGAGATTTTTTAGAACAATCTTTCCAATCTGGAGCAGTAATCTGTTTAGTTTGTATTGCGTCAGTCAAAAGGATTCaacctatATGGAGTTGCAATACTTGTTATACAGCATTCCACTTACTGTGTATACAAAACTGGGCTTCTAGTACTATTTACCAACAAAGTGAGTCTTTTGATACGCCTGTTGGGAATGCACCTGTGCgagtgaaattatcaaaaaaaattgaatggtgcTGTCCAAAATGTCGCCGTTCATACGAAcaggctgaaattccaaaaaaatacatatgtttttgTGGAAGAGAACAAGATCCAAAATTTCAACCTTGGCTTATCCCACATTCATGCGGTTctgtttgtgataaaaatttagttcCTGACTGTGGTCATAAATGTCTTCTGCTATGTCATCcagGTTCATGTCCACCATGTCCTAAAATGATAAACTTAGTATGCAATTGTGGACAAAGCAAACCGAAACCTGTAAGATGCAGTGTTCAAAACTGGTCatgcgataaaaaatgtaacaaaattttgtCATGTGAATTACATAAGTGTGAAAACATATGCCACTCTGGAGATTGTGATCCATGTTCTAAAACATCATTGCAAtcatgtttatgtaaaaaatttactgTGCAAAGACCGTGTGCAGATTCTGAATGGCGTTGTGACAccatttgtgGAAAACCTTTTCCATGCGGTTTTCACAAATGTGAGGTGATATGTCATGAATCAATATGTGGAGATTGCCCATTTAGCGGTGTTCAAAAATGCCCTTGCGGAACAGTATACAAAGAAGTTGAATGTCCCAATGAAGTATCGTCGTGTGGTGGTacttgtgataaaattttaccttGCGGTGAACATGCATGCCCTAATAAATGCCACAAAGGACAGTGTCCTCAGtgcCTTAAATTAGTTGATAAAAGGTGTCGATGCAAATTACACATCAAACAGTTGCCTTGTCATAAGCAATATTTATGCGAAactaaatgtaaaattatgaaagagTGTGGCCGTCACacgtgcaataaaaaatgctgTGATGGCGATTGCCCTCCATGTGATAAAATATGCGGAAAAACGTTGCAATGCAAAAAACACAAGTGCCCTAATACATGTCACACGGGATTATGTTACCCTTGTCCGTTGACAGCAAAAGTTTCTTGTCGATGTAACGCAACTTATTATTCAGTACCTTGCGGTGTTGAGCGCAAAACCAAACCGCCGAAATGTTTGCGAGATTGCAGactTCCAACTTCGTgcgatcattttaaagaaaacattcataaatgCCATTTCGGTGATTGTCCTCCGTGCAAGCAGCGATGCGGAAAAGCTTTGAGTTGTGGTCATAAGTGTAATATGTTATGTCATCAAGCCGTTCCCGTTTTATTGCCATCACCAAAGCCTGCTGGACCTTGGGAAGTTCAAGCTCCTAAAattgaaattaaaactttaccATGTCCTCCGTGTAAAGTACCTGTAATTAGACCCTGTTTGGGAggtcatgaaaatattgaatggccTTGCAATGAAGCTTGCATTACTTCTTGCGGGAGACAATGTGGTCGTTTATTGAAATGTACAAATCATAAGTGTTCTCTTGATTGTCACGCAATAGAGACTTCTATTGAtgagGTATTCAGCAATTGCGAAAACTGTAGCCTTAATTGCAGTTTTCCCAGACCAGAAGGTTGTAAACATCCTTGTACAAAACCGTGTCATCCAGCTCCTTGTGAAAACTgtcaacaatatataaaaaagcaatgcCATTGTGGATTGACTGAACTTTTTATTAGATGTTGTTTCCTTACTAATGgcgatgaaaatgtcaaaaatgaaTCACTTTCTTGTAAACAACAATGTAGCCTCACGTTGCAATGCGGTCATAGATGCTCAGCTATTTGCCATCCCGGAGAATGCGTTAAAACTTGCTCAAAGAAAACTAAAGTTTATTGCCCATGTCGCACTTTGAAAAAAGAAGTTCCTTGTGTTATGATAAGTGACCCTACATCAGCTGTTCAATGCGGCAAAAcatgcgaagaaaaaaaaatacagcagaTGCttgcaaaaaaagaagaagaagagaaaAGGAAActtgaagaatttcaaaaaaatcaaaaagaaatagaggaatttgaaagaaaatttgggaaaaaacgtgcaaaaaaccaaaaaaccaaaGAAACTTCACAAAAACCAGAATCGTTTTGGTCACGatataaatttgtgataattactatattcattttgattttctcaataataacCGCAtacttctttatttaa
- Protein Sequence
- MGDRWKHNRPSESAWSGRGAGRGAWKNNQNSKPPNSNATSNNIVPAKFKEASDSMLASVQKHISNYESSSDEEDLEEASILDSVTSKYSSQGEDISLGKTRDFLEQSFQSGAVICLVCIASVKRIQPIWSCNTCYTAFHLLCIQNWASSTIYQQSESFDTPVGNAPVRVKLSKKIEWCCPKCRRSYEQAEIPKKYICFCGREQDPKFQPWLIPHSCGSVCDKNLVPDCGHKCLLLCHPGSCPPCPKMINLVCNCGQSKPKPVRCSVQNWSCDKKCNKILSCELHKCENICHSGDCDPCSKTSLQSCLCKKFTVQRPCADSEWRCDTICGKPFPCGFHKCEVICHESICGDCPFSGVQKCPCGTVYKEVECPNEVSSCGGTCDKILPCGEHACPNKCHKGQCPQCLKLVDKRCRCKLHIKQLPCHKQYLCETKCKIMKECGRHTCNKKCCDGDCPPCDKICGKTLQCKKHKCPNTCHTGLCYPCPLTAKVSCRCNATYYSVPCGVERKTKPPKCLRDCRLPTSCDHFKENIHKCHFGDCPPCKQRCGKALSCGHKCNMLCHQAVPVLLPSPKPAGPWEVQAPKIEIKTLPCPPCKVPVIRPCLGGHENIEWPCNEACITSCGRQCGRLLKCTNHKCSLDCHAIETSIDEVFSNCENCSLNCSFPRPEGCKHPCTKPCHPAPCENCQQYIKKQCHCGLTELFIRCCFLTNGDENVKNESLSCKQQCSLTLQCGHRCSAICHPGECVKTCSKKTKVYCPCRTLKKEVPCVMISDPTSAVQCGKTCEEKKIQQMLAKKEEEEKRKLEEFQKNQKEIEEFERKFGKKRAKNQKTKETSQKPESFWSRYKFVIITIFILIFSIITAYFFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00816223;
- 90% Identity
- iTF_00816223;
- 80% Identity
- -