Basic Information

Insect: Hydropsyche betteni
Gene Symbol: ZFX
Assembly: GCA_028571205.2
Location: JAOXNN020000067.1:554512-556074[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00022 0.3 15.5 0.0 2 23 193 214 192 214 0.98

2 11 0.027 36 9.0 2.0 1 23 220 243 220 243 0.95

3 11 1.5e-06 0.002 22.3 1.1 2 23 255 276 254 276 0.97

4 11 1.2e-05 0.016 19.5 0.4 1 23 282 304 282 304 0.99

5 11 1.5e-07 0.00019 25.5 3.3 1 23 310 332 310 332 0.98

6 11 0.00089 1.2 13.6 1.0 1 23 338 360 338 360 0.95

7 11 5.7e-05 0.076 17.4 1.0 1 23 366 389 366 389 0.96

8 11 0.67 8.9e+02 4.6 1.7 2 23 395 413 395 413 0.85

9 11 0.00017 0.22 15.9 4.2 1 23 419 441 419 441 0.97

10 11 0.023 31 9.2 1.5 1 17 447 465 447 471 0.80

11 11 0.00039 0.52 14.8 5.4 1 23 477 500 477 500 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00022	0.3	15.5	0.0	2	23	193	214	192	214	0.98
2	11	0.027	36	9.0	2.0	1	23	220	243	220	243	0.95
3	11	1.5e-06	0.002	22.3	1.1	2	23	255	276	254	276	0.97
4	11	1.2e-05	0.016	19.5	0.4	1	23	282	304	282	304	0.99
5	11	1.5e-07	0.00019	25.5	3.3	1	23	310	332	310	332	0.98
6	11	0.00089	1.2	13.6	1.0	1	23	338	360	338	360	0.95
7	11	5.7e-05	0.076	17.4	1.0	1	23	366	389	366	389	0.96
8	11	0.67	8.9e+02	4.6	1.7	2	23	395	413	395	413	0.85
9	11	0.00017	0.22	15.9	4.2	1	23	419	441	419	441	0.97
10	11	0.023	31	9.2	1.5	1	17	447	465	447	471	0.80
11	11	0.00039	0.52	14.8	5.4	1	23	477	500	477	500	0.96

Sequence Information

Coding Sequence: ATGGAGTATGAAAACAAGATATCGTTAAAAGAGCTACATTCGTTGTGTCGTTTGTGCTTAAACTTAAGCCAAGATATGCACCAATTCTTTTCAAGCGAATCCGTGCAGCAATTGCGGGAATGTACTGGCATTAATGCAGTACCCGATCATCGTTTGCCTTCTATGATTTGCGTACCTTGCATCACCCAACTTTCCAATTGCCATGCTTTCTTCACTAAATGTCACCACAGTAATAACTATTTGAAGTCTATAATCGCAGACGAAGTCGTCAAACAAGAGGTTAAAATCGAGCGAGACTATAATCCGTTTGACAGCGATAACGAGGATAACACATTGCCTAGTATACCTTTCAAGTGTGAAAGTATATATGATCTTTCCGAATCAAGTCAAATTGATAAGCCGACTGAAGCGGTCAAGGTAGAAcgtttagatgaaaaaaatttaaaaggcgACGTCGATAGTATGGATAACGATTACAAGATAGAGGATTTGAAAAGTTCCACTAGTAGAGTTAGTTCACGTTTAACGAGCAGTCTCAAAATCAAATCTAAAGTGAAGActaaaaagaaaggaaaaaaatgtccGGTCTGCGGCTTGAATGTTATCAATCGTGCAGCTTTAGTCAATCACATGCAGATACACGATACGAATAAACCACACGTTTGCTCGTTTTGCAGTAGACGTTTCAATTTGGAAACCGCTTTGAAATTGCACGTCACAAGAATGCATTCTATTCGAGATCCAAATCCAGACCAAAGACAAACGTGTGTAGAATGCGGGAAATCACTTTCCAGCGCCAAAcacttaaaaattcatatgcgAATTCATACCGGAGAAATGCCGTATGAATGCACTATCTGTCTGCGAAGATTCACACAGATCGGATCGCTTATCGCGCACAAACGGACACATACCGGAGAAAAGCCTTACGTTTGTCACTTGTGCGGGCGAGCCTTCACAACTCGTGCCCATCTGAGGAGGCATCAAAGTGTCCATAGTAAAGAGAAACCTTTCGCTTGCAGCATCTGCGACAAAAGACTCAAATCGGAGCACGCTTTAATACAACACAACAAACTCCATACGAACGAGAAAGATCACGTGTGTGAACAATGCGGCTTATCGTTCATGGTGAAAATAAATCTAGACAAGCACATGCGGTTGAAACATTCTGAAAAATCTGGCCAGTGTaacatctgtaaaaaaatatgtcccAATTTAAAAGATCACATGGTCATACATACGGGTGAGAAACCGTATCAATGCAAAATTTGCGATAAGAAGTTCTCCTTCAAACGGGGACTTCTCATACACAATCACAAACACAAGTTTGCTGATAAATACAAATGTGATTTGGAAGGTTGCGGTCGCACGTTCAGCAGGAGGTGGGTTTTCGATTGCCACGTTAGAGAACATACTGGAGAGATGCCTTTTGTTTGCGAGATTTGTCATAAGAGTTATCCAAGAATTTGCCACTTAACGCAGCATTTGAAATTAAGTCATCCCGGAGAAGCTCACATAACTCCTATAGAAATCGATAATGGTATAATAGTTGAAAAAGAATGA
Protein Sequence: MEYENKISLKELHSLCRLCLNLSQDMHQFFSSESVQQLRECTGINAVPDHRLPSMICVPCITQLSNCHAFFTKCHHSNNYLKSIIADEVVKQEVKIERDYNPFDSDNEDNTLPSIPFKCESIYDLSESSQIDKPTEAVKVERLDEKNLKGDVDSMDNDYKIEDLKSSTSRVSSRLTSSLKIKSKVKTKKKGKKCPVCGLNVINRAALVNHMQIHDTNKPHVCSFCSRRFNLETALKLHVTRMHSIRDPNPDQRQTCVECGKSLSSAKHLKIHMRIHTGEMPYECTICLRRFTQIGSLIAHKRTHTGEKPYVCHLCGRAFTTRAHLRRHQSVHSKEKPFACSICDKRLKSEHALIQHNKLHTNEKDHVCEQCGLSFMVKINLDKHMRLKHSEKSGQCNICKKICPNLKDHMVIHTGEKPYQCKICDKKFSFKRGLLIHNHKHKFADKYKCDLEGCGRTFSRRWVFDCHVREHTGEMPFVCEICHKSYPRICHLTQHLKLSHPGEAHITPIEIDNGIIVEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00815331;
90% Identity: iTF_00815331;
80% Identity: -