Basic Information

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.9e-07 0.0061 20.6 0.1 1 37 8 52 8 61 0.87

2 3 2e-09 2.1e-05 28.5 0.6 3 45 71 123 69 124 0.87

3 3 2e-12 2e-08 38.1 0.1 1 42 130 171 130 175 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.9e-07	0.0061	20.6	0.1	1	37	8	52	8	61	0.87
2	3	2e-09	2.1e-05	28.5	0.6	3	45	71	123	69	124	0.87
3	3	2e-12	2e-08	38.1	0.1	1	42	130	171	130	175	0.97

Coding Sequence: AtgaacgtaaataaaaaaattaaaaaaaactggagCAAAGAGGACATTATTATCCTCGCCTGGCTCATCGACAAATACGGCAAACACCCGGACGATTACGACGAAACCGACTGGAGACAGATCTCAGACCTTATCCCTGGGAAAGATCATGAACAGGCGATGTTCAAATACATGAGCCtcagaaacaacaaaaaacaggCGCACAATAGGGACTGGTTACCTTCGGAAGAGAAAAGCTTGAAGGAAATCGTGCAGAGGATCGGGATAAAATCCTGGTTCGAAGTGTCCAAGCAGTTGTATTACAGCGAGGGTAAGgcattaaaaatgtatcgatCACCAAAACACTGTAGGGAAAGGTGGGCGTGCTATCTGGATCCTAAGGTAAAAAAAGGGCCCTGGTGGCCAGCTGAAGACATCATCCTTCTTAAGCAATTCCCGAGCATTGAGAACAAATGGTCTCACATCGCCAAAAAGCTTAATGGAAGGACGCAAAACGCGATAAAAAACAGGTTTACTATTCTCCTGTACAAGAAAGCCACGAGTATAATATAG
Protein Sequence: MNVNKKIKKNWSKEDIIILAWLIDKYGKHPDDYDETDWRQISDLIPGKDHEQAMFKYMSLRNNKKQAHNRDWLPSEEKSLKEIVQRIGIKSWFEVSKQLYYSEGKALKMYRSPKHCRERWACYLDPKVKKGPWWPAEDIILLKQFPSIENKWSHIAKKLNGRTQNAIKNRFTILLYKKATSII

Sequence clustering based on sequence similarity using MMseqs2