Hbet275014.1
Basic Information
- Insect
- Hydropsyche betteni
- Gene Symbol
- Snapc4
- Assembly
- GCA_028571205.2
- Location
- JAOXNN020226636.1:1-1206[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 5.1 5.2e+04 -1.6 0.0 4 18 9 23 7 24 0.79 2 6 0.2 2e+03 2.9 0.0 22 43 80 102 62 105 0.76 3 6 1.1e-07 0.0011 23.0 0.0 1 43 111 155 111 157 0.92 4 6 2.2e-08 0.00022 25.2 0.3 3 42 167 210 165 212 0.94 5 6 1e-09 1.1e-05 29.4 0.0 3 45 221 263 219 264 0.93 6 6 8.6e-09 8.7e-05 26.5 0.0 2 46 273 318 272 318 0.97
Sequence Information
- Coding Sequence
- ATGCGGCCACCCCCGACTCGTCAATGGAACACTGTGGATAAAAAACTGTTATCAAACGCTGTTCACGAACaagctaaaaaaatacacagtcATTTAGTAAAGTCTCAATTGCGCGCTCTTCAGCGTGATCCCTCTTCCTCTCCTAGCGATTTGAACAAAGCCGTGATGGCTTCCGATAAAATAGACGATATGTCTCTGGAAGCGTTGGTTGGGTCATTAGACAACTCCAATTCTTATGACTGGGACTTGGTTTCGACAACTTTACAAGGCAGACATACTGCTTTCGAATGTCAGAGTATGTGGCGTATTTTATTACATCCTACGATAAATAAGTCGCCGTGGACTGCAGGAGAAACACATAAATTACGTTTGGTAGTGTTGTATCATGACAATAAAAATTGGGATGCTATAGCCACCGATTTAGATACAGGTCGTTCGGCTTAccaatgttttgtttattacaaGATGAAAATACGTCGCAATGAGTCTTCCGGTCTCCGGTGGACGCCTGAAGAAGACGCACACTTGCTTAATGTAATTGAGCACTGCCGTGTGGGAAATCACATACCATGGTCAAAGGTTTCCTTCTTTTTAGATAATCGTTCCAAGAGACAAATCTACTGTAGGTGGGTTCACAAaagactttttttcaaaaaaggaatGCTTTCACCTGAAGAAATTGCTGTTCTTCAAGCCGCTTTTGCTGTTTATGGAAAACAATTTGGACGAATAGCCAAACTTCTCCCTGGACGTACTACAACTAATGTGATTCAATACTTTTATTCTGTTTTTGGTCCACTTAAAAACCCCATAGATCAGAACTGGTCGACAGATGAAGATtctattcttttgaaaatagctGATAAGCATGAACatgttgattttgaagaaattcataaaatgctTCCAAAAAAAACACTGTTTGGTATCAAATCTCGTTATAAccaattattattagaatatttaggaaagaagaaaaatatcaatacaattcCTTTGTGTTTATCTGATTCTCCGACGCCTGAAGCTTTATCAGAGCTACGGAGGAcgttaaaaaatcttcatgaaTCTCAAGGGCctttagataaatataataaacgcaTTAAAA
- Protein Sequence
- MRPPPTRQWNTVDKKLLSNAVHEQAKKIHSHLVKSQLRALQRDPSSSPSDLNKAVMASDKIDDMSLEALVGSLDNSNSYDWDLVSTTLQGRHTAFECQSMWRILLHPTINKSPWTAGETHKLRLVVLYHDNKNWDAIATDLDTGRSAYQCFVYYKMKIRRNESSGLRWTPEEDAHLLNVIEHCRVGNHIPWSKVSFFLDNRSKRQIYCRWVHKRLFFKKGMLSPEEIAVLQAAFAVYGKQFGRIAKLLPGRTTTNVIQYFYSVFGPLKNPIDQNWSTDEDSILLKIADKHEHVDFEEIHKMLPKKTLFGIKSRYNQLLLEYLGKKKNINTIPLCLSDSPTPEALSELRRTLKNLHESQGPLDKYNKRIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -