Basic Information

Insect: Hycleus phaleratus
Gene Symbol: salm
Assembly: GCA_013841185.1
Location: JACDRP010000004.1:111283-116704[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.5 1.7e+02 2.5 0.2 3 19 2 18 1 20 0.91

2 10 3.6e-05 0.0024 17.7 0.2 1 22 319 340 319 340 0.95

3 10 0.042 2.8 8.1 3.8 2 23 688 709 687 709 0.98

4 10 2.9e-08 1.9e-06 27.5 0.6 1 23 715 737 715 737 0.97

5 10 4e-05 0.0027 17.6 2.6 1 23 747 769 747 769 0.98

6 10 0.0061 0.4 10.7 2.4 2 23 1032 1053 1031 1053 0.97

7 10 0.027 1.8 8.7 1.0 1 14 1059 1072 1059 1073 0.93

8 10 7.1 4.7e+02 1.1 0.1 14 23 1124 1133 1122 1133 0.89

9 10 9.2e-07 6.1e-05 22.7 4.0 3 23 1246 1266 1244 1266 0.96

10 10 1.3e-07 8.8e-06 25.4 0.9 1 23 1272 1294 1272 1294 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.5	1.7e+02	2.5	0.2	3	19	2	18	1	20	0.91
2	10	3.6e-05	0.0024	17.7	0.2	1	22	319	340	319	340	0.95
3	10	0.042	2.8	8.1	3.8	2	23	688	709	687	709	0.98
4	10	2.9e-08	1.9e-06	27.5	0.6	1	23	715	737	715	737	0.97
5	10	4e-05	0.0027	17.6	2.6	1	23	747	769	747	769	0.98
6	10	0.0061	0.4	10.7	2.4	2	23	1032	1053	1031	1053	0.97
7	10	0.027	1.8	8.7	1.0	1	14	1059	1072	1059	1073	0.93
8	10	7.1	4.7e+02	1.1	0.1	14	23	1124	1133	1122	1133	0.89
9	10	9.2e-07	6.1e-05	22.7	4.0	3	23	1246	1266	1244	1266	0.96
10	10	1.3e-07	8.8e-06	25.4	0.9	1	23	1272	1294	1272	1294	0.98

Sequence Information

Coding Sequence: ATGTGCCAGCGTTGTCAAGAACAGTTCACTGACGTTCAAGAATATTTAACACACAAAGCTGAATGTGAAAAGAAGGCCATCAAACATGATGATCCAGCCCATTCAGATCCTGAAGATATGGTCGTCTCAGAGGATGATGAGGACGATGATGAGACAAATGGTAAACGATTGGAAAGGATGCGACGACATCGACAAGATGCTGCAAATAATAATAGTGTTGATGAGAATTCACCAGATGATAATCCACGATTGGCTTTCCCATTTCCTATACCTTCTGCAACAGGTCATGTCACATTAGAAGCACTACAAAATACCAAAGTGGCTGTAGCGCAATTTGCTGCTACAGCTATGGCGAATAATGCTGACAATGAGGCAGCACTACAAGAATTGGCTGTTTTACAATCAACACTTTTTACATTACAACATCAACAAGTGCTTCAATTGCAATTGATAAACCAATTACAACAACAATTACAAATTGATCGTACTAAGGTGGATAGTCCCGTATCACCGCCACCATCAGAGAACGATGTTGAATGTGCACCGACTGAAGCTTCACCGCCACCACAAAATTTACCAATCTCAAGGGAAAATACACCTACGCCAATCCCACCGCCACCGCCTCCCCCAATTCCACCAATTCAAGAAACAGAAATTCCAGTTAGCAGTGAAGCCGCAATACCACCACCTAGTTGTACGACAGCATCTATGATCTCTTCACATTGTTCGATTTCATCATCATTAGCTTCAACGATTATTACGCATAATAATGAACCACCATCATTAGACGAACCAAATACTTTAGAAATGTTACAAAAAAGAGCACAAGAAGTATTGGATAATGCCAGTCAAGGACTATTAGCGACAAATTTAGCCGATGAATTGGCATTTAGGAAAAATAAAGGTAGTGTGTCTCCGTACGATTCTAAAGGTCGAAACGAACCGTTCTTTAAACACCGCTGTCGGTATTGTGGTAAAGTGTTTGGTTCAGATTCAGCCCTTCAAATACATATCCGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCAAAATTTCCTCATATCAAAATGAATCCAAATCCAGTTCCTGAACATTTGGACAAATATCATCCACCATTATTAGCACAATTAGGCCAACAGCCAGCTTTATCGCCTGGTGGACCTCCTCATCCACCCCATTTAGGTGGTTTCCCAGGTGGTCCACCATTTCCACCGACTAATTTACCGTTATATCGGCCGCATGGTCCACCGCCACCGCCACCTGAATTAATTAGTGCAAGATTACAACCGTCACCGCATAGATTACAACAAGAGGCGAATCAAAGAATCTTCCAACCGCATACGATGTTTATGAAAAGAGAAGAACAAGAATTACCAGAAAATTTAAGTAAACCACCTAGATCGCCTACGCCAATCCACGAATCGCCTCAGTGTAAACAGGAAACACCCGAAGAACCTACAAGGAAAGATTTTAGTGAAGAATTACGATCAACCACGAATGTTCCTCAATTGACACCAAAACAAGAGCCGCATGATGATGTTGAAGGTGAACACGAACACGAACGATATCATCCTTCACCGACTCCTTATGATGAATGCAGTATTGATAGTAAATATAGTAATGAGGATATGTTAAGGCAGAGTCCTAATGGTGATCAGTCTGAGCAAATGCAAGATGAGCCTGAGAACTTGTCAAATAAAAGTAATTCCATTAATGTTCCGTTAAGTATTTCAACCGGTCAAAGGTTGCCTGCAAATTTTTCATTTGGACAAGTCAGTTCACCTCCAAGTAGTACATCGTCCGGTAGTTTAGGTCCATTTCCATCGACTCCCATTGTAGATCCAGCTAAAGATCCAGCAATTTATTCGAATTTATTGCCACGACCCGGTAGCAATGATAATTCTTGGGAAAGTTTAATAGAAGTGACAAAAACATCGGAAACTAGTAAACTACAACAACTAGTTGATAATATTGAGCATAAACTATCCGATCCGAATCAGTGTGTAATTTGTCATAGGGTGTTGTCGTGTAAAAGTGCTTTGCAAATGCATTATCGAACTCATACAGGTGAACGGCCTTTTAAATGTAAAATCTGTGGTCGTGCATTCACTACTAAAGGTAATTTAAAAACGCACATGGGTGTACATCGGGCGAAACCACCAATGCGAGTATTACACCAATGCCCAGTTTGTCATAAAAAATTCACAAACGCCCTAGTTCTTCAACAACATATTCGTCTACATACTGGTGAACCGACCGATCTAACACCGGAACAAATTCAGGCTGCCGAAGTTAAAGATTTCCCATCACCTGGTGGTTTCCCATCATTACATAATTCCATTCATCCATTCCTTGGACAAGGTTTTCCTTTGCCAGGTTTATCACCATTAGGACCTACCGGTCTTCCATTAAATATAAAATTAGATAAATTCGATAAGGATGAACATGAGTCGATAGACGAAGACGATGATGATGACGATGATATTAGTAATTCGGATAATCCAAATATGTTGCCGTTTGCTTCATCACCATCAGAATTGCAAGGTGTACCAACTAGTATAGCATCACAATTGAATTGTTCAGCAGAGGATTTATGTTCGTCCAGAAATGCTCCATCCACATCACCGATGCAAAATGGAGAGAAATCACCTTGCCAATCTGGTATTACCAGTCCGGGAAGTTCAGAAATCCGTTCTTCACCTAATCAAACCACACCCGTCCAGGTTCCACGTCCGCCCTCATCAACACAAGCTGGTAGTCCAACTCCTTCTGAGTGCAATTCTTTAGGTGCTCTAGATTTAACACCACGTACAAATCAACCGTTAATTACAAGTCCAGGTCCAAGTCCAGGCCCACCTCCATCATTATTTTCAACATTCGGTTTAATTCCACCCGGCCAAGGAGCTCCAGCTCCATTAATGTCATCAGCATTATCATCATTGACATCTTCTGTTTTAACATCAACGGCATTCAGTCCGTTGCGTTTAGCTGTAGGTCCTGCAGATTTTAATTTAGGTCGTGGCAATACCACCTGTAACTTGTGCTTCAAAACATTTGCATGTAATTCAGCTTTAGAAATTCATTATAGAAGTCATACGAAAGAGCGACCATTCAAATGTAGTGTTTGTGATAGGGGCTTCTCAACGAAGGATGAATGTGCATGCCGACAGAGGCGTATCCAGGATGAAGTTGAACCGTGGAGGGCATGGAAAAGGAAACTTGCCCCGCAAATTAATAATTCAATACCATCGGTATTTCCACTACCGATGACACCTGGATACGCCTCAAATTGGATGCAAGTACCTGGCAACATGAAACAACACATGTTGACGCACAAAATACGAGATATGCCCCAACATATGTTTGAAAATAAACCACTATCTGTAAGTGGTGATGAAGGTTCCCAACAACCTCCCCATCCACCCCCACCTCCACCACCGCCACCTCCGCCCCCACCACCCGCACCACAAAGAGACAATGTTCAAAATCAAAATGATAATGAACAACAGCAACAACCACAACAACAACAACAACCACAACAATTACCACCAACATCTTCATCAGCACCACCTGTGGACTCAAATAAAGAGCAAACTACTAAAAGGGAGCCTACTGAATCGGAATTGCCACTACCTAAACGTCCTCCGAGCTTACAGGCCAGTAAACACTTGTGCCACGTATGCAATAAGAACTTCTCGTCCAGCTCGGCCTTGCAGATACACATGCGTACGCACACGGGCGATAAGCCGTTCAGATGCACCGTGTGCCAGAAGGCGTTCACCACCAAAGGAAATCTAAAGGTTCATATGGGCACGCACATGTGGAGCAACGGGGCATCCCGACGCGGTCGTCGCATGTCACTAGATCTACCGCCCATTCCCATGACGCCCAAGGATTCAGAATTTCTGCAACGGAGGCCCGACCTTTTTTATCCATACCTACCGGCTCCCTTCCTTAATGGCATGCAACAAAAGTTAAATGAAATGTCTGTGGTGCAAACTAGCCAGAACGGGATAACGGGTAATAAATATAGTGGCCTATTAGGATTCGGTTATCCACCACCAGAATCGCTACGTTCACAAAGTGGTAGTTCACCGGAGAGACCAGAGAGGCCGCCTAGTCGTGATGGCCCTGAGACACGGAGCTTATGGGATCTGCATTTCGAACGGAAATCAGCACCGGAAGCTCCACCTAGAGACGATTTGATGCCAGCTAATAGAGAAGGTTTAGCTGCGTAA
Protein Sequence: MCQRCQEQFTDVQEYLTHKAECEKKAIKHDDPAHSDPEDMVVSEDDEDDDETNGKRLERMRRHRQDAANNNSVDENSPDDNPRLAFPFPIPSATGHVTLEALQNTKVAVAQFAATAMANNADNEAALQELAVLQSTLFTLQHQQVLQLQLINQLQQQLQIDRTKVDSPVSPPPSENDVECAPTEASPPPQNLPISRENTPTPIPPPPPPPIPPIQETEIPVSSEAAIPPPSCTTASMISSHCSISSSLASTIITHNNEPPSLDEPNTLEMLQKRAQEVLDNASQGLLATNLADELAFRKNKGSVSPYDSKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKFPHIKMNPNPVPEHLDKYHPPLLAQLGQQPALSPGGPPHPPHLGGFPGGPPFPPTNLPLYRPHGPPPPPPELISARLQPSPHRLQQEANQRIFQPHTMFMKREEQELPENLSKPPRSPTPIHESPQCKQETPEEPTRKDFSEELRSTTNVPQLTPKQEPHDDVEGEHEHERYHPSPTPYDECSIDSKYSNEDMLRQSPNGDQSEQMQDEPENLSNKSNSINVPLSISTGQRLPANFSFGQVSSPPSSTSSGSLGPFPSTPIVDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSLHNSIHPFLGQGFPLPGLSPLGPTGLPLNIKLDKFDKDEHESIDEDDDDDDDISNSDNPNMLPFASSPSELQGVPTSIASQLNCSAEDLCSSRNAPSTSPMQNGEKSPCQSGITSPGSSEIRSSPNQTTPVQVPRPPSSTQAGSPTPSECNSLGALDLTPRTNQPLITSPGPSPGPPPSLFSTFGLIPPGQGAPAPLMSSALSSLTSSVLTSTAFSPLRLAVGPADFNLGRGNTTCNLCFKTFACNSALEIHYRSHTKERPFKCSVCDRGFSTKDECACRQRRIQDEVEPWRAWKRKLAPQINNSIPSVFPLPMTPGYASNWMQVPGNMKQHMLTHKIRDMPQHMFENKPLSVSGDEGSQQPPHPPPPPPPPPPPPPPAPQRDNVQNQNDNEQQQQPQQQQQPQQLPPTSSSAPPVDSNKEQTTKREPTESELPLPKRPPSLQASKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEMSVVQTSQNGITGNKYSGLLGFGYPPPESLRSQSGSSPERPERPPSRDGPETRSLWDLHFERKSAPEAPPRDDLMPANREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00813971;
90% Identity: iTF_00813971;
80% Identity: -