Basic Information

Insect: Hycleus phaleratus
Gene Symbol: Prdm15
Assembly: GCA_013841185.1
Location: JACDRP010000134.1:40876-45116[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 8.5 5.7e+02 0.8 0.3 2 8 4 10 3 11 0.87

2 12 4.3e-06 0.00028 20.7 1.3 2 23 234 256 233 256 0.96

3 12 0.00085 0.056 13.4 2.0 1 23 363 385 363 385 0.98

4 12 0.0027 0.18 11.8 4.6 1 21 389 409 389 410 0.93

5 12 0.0011 0.07 13.1 1.2 1 23 415 439 415 439 0.97

6 12 0.069 4.6 7.4 5.0 1 19 443 461 443 464 0.93

7 12 4.3e-07 2.9e-05 23.8 1.6 1 23 473 495 473 495 0.98

8 12 0.00074 0.05 13.6 0.3 2 23 514 535 513 535 0.97

9 12 0.00041 0.028 14.4 5.9 1 23 540 562 540 562 0.98

10 12 0.00017 0.011 15.6 0.9 1 23 568 590 568 590 0.98

11 12 3.5e-06 0.00024 20.9 1.9 3 23 597 618 595 618 0.95

12 12 0.00024 0.016 15.2 2.2 1 23 634 657 634 657 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	8.5	5.7e+02	0.8	0.3	2	8	4	10	3	11	0.87
2	12	4.3e-06	0.00028	20.7	1.3	2	23	234	256	233	256	0.96
3	12	0.00085	0.056	13.4	2.0	1	23	363	385	363	385	0.98
4	12	0.0027	0.18	11.8	4.6	1	21	389	409	389	410	0.93
5	12	0.0011	0.07	13.1	1.2	1	23	415	439	415	439	0.97
6	12	0.069	4.6	7.4	5.0	1	19	443	461	443	464	0.93
7	12	4.3e-07	2.9e-05	23.8	1.6	1	23	473	495	473	495	0.98
8	12	0.00074	0.05	13.6	0.3	2	23	514	535	513	535	0.97
9	12	0.00041	0.028	14.4	5.9	1	23	540	562	540	562	0.98
10	12	0.00017	0.011	15.6	0.9	1	23	568	590	568	590	0.98
11	12	3.5e-06	0.00024	20.9	1.9	3	23	597	618	595	618	0.95
12	12	0.00024	0.016	15.2	2.2	1	23	634	657	634	657	0.98

Sequence Information

Coding Sequence: ATGGATCAACAGTGCAATATTTGTGGAGAATTTCATAATTCCGACGATTGTGCATTAATTAAAATAACAAATTATGTACCGGACAATGAGATTCCATCTCGGGCTAAATTAAGTTTACCGAATTTTCTACAATTACAACTGCTCACAGACGGTTCTTATACAATAATAACGAAAGAACGTATCGAAAAGGGCACAAAATTTGGCCCTATGGTAGCCAGGAAAGTTGCAGAAATCAATCCTTTAGTAGGTTTTCCATTAAAAATTTTCTCACAAAATGATTGCGATGAATATTATTTGGATACAACAAACGAGAATGAGTGTAATTGGTTGATGTTCGTGTGTACAGCTGAATTTTTGGAAGATCAAAATTTGATTTGTTACCAAAAAGATTTGGATATTTATTATGTTACTATCATAGATATTGAGCCCAATCAAGTGTTAAAAGTGTGGTATTCGCCGTATTATGCGAAGAAAATGAATAGAAATCTGTTAGTATCGTCGATATTGTTGAAAAATACAAATTTCGATTTGGAATCGACAGTGCAATTGAAGAATGTCGATTTGAATAGTTTGGTAAAACAACAGCAGAAAATTGTTGAAAAGAAGCAATGGTTATGTAAATTTTGCAATAAAATCGATGGTGATATTGTTTCGTTTGCAAAACATTTGATTGTACATTATCGTTTACAATTGAAGAAAACGTGCGAGATCTGCAAACAGACATTCAACTCTAAAAAGAACTTAGCAAAACATTTAAAAATCGTTCATTATTCGGAAAATTCTCAAACTAACGATCTACGAATAAATCCGTTATCATCAATATCGTTATCACCATCATTAAAAACAAAAACAAAAGATCAATCAGTTGGTGGTCCATTATTGAACGATATGTTTACAGATAGTAGTGATTTACAACAATTCGATATAAATACAACAATTAATAATAATCAGAATTTATTAGATGACGATATTGAGAATTTATTATTAACTGACGAAGTTGAGAATTTTCAACATTTCAATTTCAATATAATCGACGATAAACAACAACAACAAGAGAAACAAAAATCTAATGATAAACAACACAAATACGAGTGTGATATTTGTTTAAAAAAATTCAAAAAAATCCACCTATTATTAATACATTTGAAACAACACACTGGCGAATATTTGTGTACGAAATGTTTGAAAATTTTCTGTCGTAAAGAGAATCTAATAACGCATCAATGCAATTGTGTGAAACTCTATCAATGTGATTTATGTAATGATAAAAAATTTCCACAAATGAAATATTTAAAACGACACATACTAATTAAACATAAATTACGTTATTTTTGTAATTTATGTAAAAAGAATTATTATTCGAAATATGAATTATCACAACACAATTGTAAAGTTTCGAATTTATTTAAAGAGAAATTCGTGTGTTCGATTTGCGATAAAGTCTTCTATCGAGAGATGTATTTGAAGAAACATCTAAAGACCCATTTACCGAAACATGATAAACAAGAATTGGTTAAAACAACAACCAATAATTCTACAATGTGCGATATTTGTGGTACAGTTTTAGAAAATAAAAATTCCCTATATTTACATTTGAAGAAACACAATGAACCGAAACATACTTGTACGATTTGTTCGAAGAAATTCCATAGATTTGATTCGTTAAAAGCGCACGAAAATACCCACAAACCGACACCAGAATTTGAATGTAATTTGTGTTTGAAGAAGTTTAAAGCTCGTTCAACGTTACAAGGGCATATTAATTCTCATAGTGGAAAATTATTGGATTGTAAATATTGCGGTATGCAGTTTAGGTACCGAAGTACGTTGAATAAACACATAAGAAATAAACATAATAATGATGATCTCAATGCGACTTCGAAAATTCTAATGAAATATTTTTCGTGTCCGATTTGTCGTAAACATATTAAATTGAGAAGTTCGTTGTTGAGACATCTGCGGAAAATCCATCCAAATGATTTCAAAAATATCAGTGTGTTAGATATAAGACAAAAGAATTTAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATTATAGGATGATAACAGAATTAAAGAGGAAACAAGACGATGTTAAAAATGATGATGGCGACAAGAAGAAGGAGGTTTGCTTGTCGATTCCGGATTTGAGCGAGAAGGAGCAGGAAATCACCTTAGATAACAATGCGTACATTCTGGATAATGGTACAATAATTCAGCCACAATTAGACTCGGATAAAGTGATAATTTACGTTCTAGATCAGTCATATTAG
Protein Sequence: MDQQCNICGEFHNSDDCALIKITNYVPDNEIPSRAKLSLPNFLQLQLLTDGSYTIITKERIEKGTKFGPMVARKVAEINPLVGFPLKIFSQNDCDEYYLDTTNENECNWLMFVCTAEFLEDQNLICYQKDLDIYYVTIIDIEPNQVLKVWYSPYYAKKMNRNLLVSSILLKNTNFDLESTVQLKNVDLNSLVKQQQKIVEKKQWLCKFCNKIDGDIVSFAKHLIVHYRLQLKKTCEICKQTFNSKKNLAKHLKIVHYSENSQTNDLRINPLSSISLSPSLKTKTKDQSVGGPLLNDMFTDSSDLQQFDINTTINNNQNLLDDDIENLLLTDEVENFQHFNFNIIDDKQQQQEKQKSNDKQHKYECDICLKKFKKIHLLLIHLKQHTGEYLCTKCLKIFCRKENLITHQCNCVKLYQCDLCNDKKFPQMKYLKRHILIKHKLRYFCNLCKKNYYSKYELSQHNCKVSNLFKEKFVCSICDKVFYREMYLKKHLKTHLPKHDKQELVKTTTNNSTMCDICGTVLENKNSLYLHLKKHNEPKHTCTICSKKFHRFDSLKAHENTHKPTPEFECNLCLKKFKARSTLQGHINSHSGKLLDCKYCGMQFRYRSTLNKHIRNKHNNDDLNATSKILMKYFSCPICRKHIKLRSSLLRHLRKIHPNDFKNISVLDIRQKNLTXXXXXXXXXXXXXNYRMITELKRKQDDVKNDDGDKKKEVCLSIPDLSEKEQEITLDNNAYILDNGTIIQPQLDSDKVIIYVLDQSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00813901;
90% Identity: iTF_00813901;
80% Identity: -