Hpha006518.1
Basic Information
- Insect
- Hycleus phaleratus
- Gene Symbol
- ZNF296
- Assembly
- GCA_013841185.1
- Location
- JACDRP010000973.1:8857-11590[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.011 0.71 10.0 2.8 1 23 15 38 15 38 0.96 2 21 7.7e-07 5.1e-05 23.0 0.2 1 23 52 74 52 74 0.98 3 21 1.8e-05 0.0012 18.7 4.1 1 23 80 102 80 102 0.98 4 21 3.1e-05 0.0021 17.9 0.3 1 23 108 130 108 130 0.98 5 21 0.0035 0.24 11.5 0.3 1 21 136 156 136 157 0.94 6 21 3.8 2.5e+02 1.9 3.0 3 23 195 215 194 215 0.95 7 21 0.00018 0.012 15.5 0.3 3 23 245 265 243 265 0.96 8 21 0.011 0.72 9.9 0.9 1 23 270 292 270 292 0.93 9 21 1.6 1e+02 3.1 6.9 2 23 299 320 298 320 0.93 10 21 1.9e-05 0.0013 18.6 0.9 1 23 326 348 326 348 0.98 11 21 4.9e-05 0.0032 17.3 2.5 1 23 354 377 354 377 0.94 12 21 1.9e-05 0.0013 18.6 3.9 1 23 388 411 388 411 0.97 13 21 2.8e-06 0.00019 21.2 0.0 2 23 420 441 419 441 0.97 14 21 0.0044 0.29 11.2 1.1 1 23 487 510 487 510 0.98 15 21 0.0037 0.25 11.4 1.0 1 23 531 554 531 554 0.97 16 21 3.8 2.5e+02 1.9 5.3 1 23 558 580 558 580 0.89 17 21 0.28 18 5.5 5.6 1 23 586 609 586 609 0.97 18 21 0.037 2.5 8.2 0.8 1 14 615 628 615 637 0.83 19 21 0.06 4 7.6 1.7 1 23 643 666 643 666 0.92 20 21 6.7e-05 0.0045 16.9 0.6 2 23 678 700 677 700 0.97 21 21 0.0012 0.08 12.9 0.1 1 21 795 815 795 816 0.95
Sequence Information
- Coding Sequence
- ATGAAGGAACATTTGGTTACACAACATAACTCGAAAAATCTCCACGTCTGTCCGGTTTGTCGGGCATCCTTCCAATTTCGCAAACAACTAAGCGATCACCGCCAGAAGAAACACAAAAATTATTATTACAACCTAAGAATTAAGAACCAACGCTTTGTCTGTGATATCTGCGGTAAGATTTTGAGCCATCCGGAATCGTTAAAGTCCCACATTAGGATCCATACCGGCGAAACTCCGTACGCTTGCAGTTATTGTGGGAAATGTTTCAAACATCGCAACCGTTTGGCTGAACACGTACGTATTCATACAGGCGAACGTCCGTACGTTTGTGGATTTTGCAAAAAGGGCTTTACGCAGAAAGCACCGTTAAAAGTCCACGAAAGAATCCACACGGGAGAACGGCCGTACCGTTGCCGGATCTGCAATAAAGGGTACACGTCGAAAGGGGCGCGAGATATCCATATGAAATCCTGTGATTTTAAGCCGGAGACTGAATACGTTATTGAAGAGATTTGTCTCGATATTTACGACGATGAAGCTACCTCAGACGGTGCTATAACAACTAAAGAGAAAACTTCACTTTGCGAACGTTGTGGCAACCGATATGATTCGAATTATTTCTGTAAACACCGCGAAAAAGTCCATGAAAGGAACCACATTTTGTGCCATCATTGCGGCGATTTGGTACGTAAAGAAGCGTTCACAAATCACGCCAAAATTCACGGGATTTGTTGTGAAATATGTCCGGAAGTTTTTAAAACAATCGCGGAATTAAACGAGCATAGTAAAACCCATAATGATCGAATTTATGAGTGTCAGAGGTGTCCGTTGAAATTTGCAACACCATTCGAGTTGGTTTTACACAACCATCAACATAGCGGTCTATCCTCGTTGCAGTGCATCAAATGCCACTTTTCAACAAAGAAGCATTCATCGATGAAGGAGCATTTGCGTCGGCATGAAGCTTGCTTCAATTTCGTTTGTGACGTTTGTTCGAAACGATTTTACAGACGGATACAGTTGAATGCCCACAAACAAATCCACGAGACTATACCGCAATACATCTGTGAATTTTGTAATAAAAAATTCACATCGCCGCGTTACTTGAACAATCACCGGATGTTCAATCATTCGAAAGAGATTACAGGGATTGAAACGAGGCATGTTTGCCAAGAATGCGGACGTTGTTTTAAATTTGAAGTGAGTTTAAAGCGGCATTTGAGCACGATTCACAATATCGGTGAATGTCGCCGAGTCCCGTGTCCTGTTTGTAATAAAATCATAGCGAATCCGTACAATTTGAAGATGCACATGAGGACGCACACCGGCGAGAAATTGATGGTTTGCGATTTGTGCGGATTGGGGTGTAGAAAGCTTAGAAAATGTAGAAAAACTCAAGATTCAGATGGGGAATACAAACCGTCGAGTAACTCGAAAACAAGACGACAACTACGAACTTATACTTGTCGGAAATGTTTGTTAGAATTCCCGCAAAGGAAACTACTGGAAGATCATAATAGAACAAGTCATTTGAAAGATGAAGATAATGGTTATAAATACAGTTTTAAATACGATGAAAAACAACAAGTCTACATCTGTAATGTGTGTTCAGCTGAATTTCAGGACCGTTCAGAAACACAAAAACACTACAAAAGGAGCCATGTAGATAAATTTTGTTGCGATCAATGCAATACGGCATTCGATAGTGCCTATGCGTTTAGTTGTCACAGCCAAAAGCACAACTCAGATCAACTATTTCATTGCCCGTTTTGTTCATATTCAACGAAACGTAGAACTTGTATCTTAACCCACATTAACCGGGTACATTACCACAAATTCTACTATTATTGCAAGACTTGCGGTAAAGGTTTTAACGATTTGACGATTTTCCGCGAACACGACAACGAACACAAAGGCGTCAAGCCGTTCGTTTGCGTTGTTTGTAGCAAATCGTTTGTATTCTCGCGTTATTTATATTTCCATCAAATCCGCTATCATACCGTCAATATTGAGGGGCGAATTAAAGAGAACCAATGTCCTCTATGTTCCAAAATTTTCGCAAAACAAACAACTCTAGTTAAACATCTATCGACAAGTCATTCGAAATCGGATACACCAAGGGAACGGCGGCATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAAGCCGCGCCGTTACGCATCCATATTAGGGGGCATACCGGTGAACGGCCCTATGTTTGTAATTTTTGTAGTGCCGGATTCACGTCGAAGGGCGCTTTGAATATGCACCGGAAAGTGTGCACGGGTTCCGCTAGTTAG
- Protein Sequence
- MKEHLVTQHNSKNLHVCPVCRASFQFRKQLSDHRQKKHKNYYYNLRIKNQRFVCDICGKILSHPESLKSHIRIHTGETPYACSYCGKCFKHRNRLAEHVRIHTGERPYVCGFCKKGFTQKAPLKVHERIHTGERPYRCRICNKGYTSKGARDIHMKSCDFKPETEYVIEEICLDIYDDEATSDGAITTKEKTSLCERCGNRYDSNYFCKHREKVHERNHILCHHCGDLVRKEAFTNHAKIHGICCEICPEVFKTIAELNEHSKTHNDRIYECQRCPLKFATPFELVLHNHQHSGLSSLQCIKCHFSTKKHSSMKEHLRRHEACFNFVCDVCSKRFYRRIQLNAHKQIHETIPQYICEFCNKKFTSPRYLNNHRMFNHSKEITGIETRHVCQECGRCFKFEVSLKRHLSTIHNIGECRRVPCPVCNKIIANPYNLKMHMRTHTGEKLMVCDLCGLGCRKLRKCRKTQDSDGEYKPSSNSKTRRQLRTYTCRKCLLEFPQRKLLEDHNRTSHLKDEDNGYKYSFKYDEKQQVYICNVCSAEFQDRSETQKHYKRSHVDKFCCDQCNTAFDSAYAFSCHSQKHNSDQLFHCPFCSYSTKRRTCILTHINRVHYHKFYYYCKTCGKGFNDLTIFREHDNEHKGVKPFVCVVCSKSFVFSRYLYFHQIRYHTVNIEGRIKENQCPLCSKIFAKQTTLVKHLSTSHSKSDTPRERRHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAPLRIHIRGHTGERPYVCNFCSAGFTSKGALNMHRKVCTGSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -