Basic Information

Gene Symbol
Camta1
Assembly
GCA_013841185.1
Location
JACDRP010000548.1:16507-29149[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2e-35 2.5e-31 107.3 1.5 40 116 2 76 1 76 0.97
2 3 0.19 2.4e+03 -2.2 1.2 44 80 524 560 503 569 0.64
3 3 0.41 5.1e+03 -3.3 2.1 13 86 1277 1356 1272 1362 0.58

Sequence Information

Coding Sequence
ATGTTGCTCTACAGTCGGAAGAAAGTCAGATATCGTCGTGATGGATACTGTTGGAAGAAACGTAAAGATGGCAAAACCACCAGAGAAGATCACATGAAATTGAAAGTACAAGGAACCGAGTGCATTTATGGATGCTACGTACATTCAGCTATCTTACCAACGTTCCATCGTCGTTGTTATTGGCTTCTACAGAATCCGGATATTGTATTGGTTCATTATTTAAATGTTCCATATCCGGATGATAATAAATTAGCCGTAATAACCCCAAGTTTAGCATTATGGGCTGATAAGAAGGAATGGACGAAGGATGAATTAGTATCACAATTGAAGCCGATGTTTTTCAGTGAGGATGAGCCTGATTTGAACAACGAATTAGAAATATCGAATTTCAAATTACAGACTGCAGAAACTGTGGAAGCTATTGTTAGTCAATTAATGGAGAAACAACGTGTCGCCCGTCAAGCAGCACTTGTAAAACAATTAGAATGCGGCTGTCCAGATTCAACGTGTGCAGATGGTAAAAGTTGTTCGCATCCAATGAGACGTATCACATCAGCTAAAGATATAACAGCTTCAACATTACCTAGTTCCAGTTCAACATCAAATACACGCCCATCAAATGGTACTACTGACAGTAATAATCAAGTAACATCAACAACTGGTACAGGAACAATGTTATTAACAAATAATCATTCACCGAGAGTCTATTCACGTGATACACGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATTCAAGATCAGGCAATACACCACCATTAGTTTTAAGTTTATCACAATTACAAAGCAGTGGTGGTTTGTTAATTTTAAATAGTAATTCGGGTAGTTCAGCAAATAATTCAAATCATCAAAATGTGATTACACCAGTATCTGTTGCTAATTTTGTTTGTAACACAAATAGTGCGCGTATTAAAAATGAAACACGCAATAATCATTTAGTTTTAAAACAAGAAATTATGGAAACAAATCTATCATCATCATCAACATCGTCGAATTCAACAACAACGTCTTGTAATAATCATCAATCGGTAAAGCAAGATAGCAAAAATCAACGCGATGGGATGGAAATTAATGATAATTTGCGACAATCAGTATTTGATAGTGTCCAATATAATCGACAAGAACAGTCACAACAACAACAACAGAAACAACAACAACAATCATCACAGCAGCAACAACAACAGACTGAAGTGGTAATGTCCAGTGCTCCATCGACACCATCGAAACAAATGGATACAAGTCACGATGAGGTTATTGACGACTTTAAACACCGAAATTTCTGCGGTGATACTGTTGTACTACTTGGTACTGATTCGAGCGGGTCTCTAGTCAGTAAAAGCGACAATTCTTCCATTATTAATAGTGGTTTTTTCAACGAAACTTTGGATTTATCCCAAGAAGATATCCAGAGGACATTATCAGCTAATATGCCCCTGTGTTCAAGTGAGCCTCCAGAAACTGGTAATTCTGCCCATCACCATCATCACCACCATAACCACCACCAACAGCAGCAACAGCAACAACAACAACAACAACAACATCATCAACAACAACACAATCATCAACAACATCAAAATAATAAACATCAACAACAACAGACAATTCAACAAGAAATCAATCCGATGGATTTTATTGATAGTTGTGATGTTGTTGTTTCACCAACACATGTTGTCGATGATGATGTATTTGTTAATTTGGATGCTTTTGATATGTTGGGCGAATTTCCCGATCTGGAGGCATTAGATTCTGGCCAAACTGGTCTGCTTGATGTACATCCGTCCGAAACAAATCGACAAGAGAAAACAACAATGACAAATTCAACTAATAATACTGAAACAAATCATGGTAATAATCAAACAATGGAAGGTTCAGCGAAAATTACCGATTATTCACCAGAATGGGCCTATCCGGAGGGTGGTGTTAAAGTTCTTGTTACAGGACCATGGCACTCGGCCGGACCATATACAGTCTTATTTGATACATTCCCTGTACCTACTACTTTAGTTCAAAGTGGCGTTTTACGTTGCTATTGTCCAGCTCATGAAGCCGGATTGGCGACACTTCAAGTAGCATGTGACGGCTATGTGATTTCCAACTCTGTGATATTCGAATACAAGCTGCCACCGAGAGAAGAACAGGTTACAGCGCCTGAACCGAAAATCGAACGATCCAATGATAATTTATTAAAATTTACATTATTACAAAGACTGGAGGCGATGGATGATCGGTTACAAATCAAACAGGAACCCTCCGATGGTTCAGACTGTGTAGAAGATAGTGTTCTATTTTCGCAACCAAATTTCGAGGATCGTTTGGTGAGTTTCTGTCAAAATATGACATCGCGTCTGTGGCGACATGGTGAAGAATTGAGTGTCTCATGGTTTGCTAGTCATCGCGGCATGACTTTATTACATTTAGCTGCTTCTTTAGGTTATTCGCGTTTAGTGTGTGCATTGTTGCATTGGCGTGCTGAAAATTCGTCATTACTATTAGAGACCGAAGTTGATGCTTTAAGTCAAGATGAAGACGGTTATACACCGTTGATGTGGGCATGTTCACGTGGCCATACCGAAACAGCCGTAATGCTATACAAATGGAATCATACAGCTTTAAATATGAAGAATACAACAAATCAAACATGTTTAGAAATTGCCCGTAACAATAATCATAACGAACTTGTTAAAGAATTAGAGAAATTAGAATTGCGCCGCGATAAAGCTAATATGTTATTATTGCATTCAACAACAAATTATTCATCAGAATCACCAAGTGTTATATCACCAGCTAGTTCGATTGCATCGTTAAGTTCAATTGCATCAACAAGTAAATCCCATGATGGTGTTTTTTTACGGCCGGGTGCCGTTACACGGAGCGAATCACAGAAATATCGTATGCTAAACTTAGATTTAGATTCAGATGGGAATATTATCGGTAATAATAAAATGTTAGGCTCAACACCTAGTCCATTATTATCGGAATCATCGGCGAGTACACGTAGTAATAATGGACAGAAATTAGTTAAACGACCATCCATAGATAGCGGCATACATATGAGTTGTGGTACTGAAAATAGTAGTAAATCGAAATCATCACGATTACTCAATAAAGATACACCGAAATTATCCAAATTCGACCGCAGTATGTCTCTGCCATTACATTCACCTTTATCGGCCAGAGACAACTTCTTCGAGAATGAATCTTTGGAATGTGGCAGCGGACGAAAAATGGATTTTGCTCTATGCGAAATAGGGAGTGGTCCAAGAAGCAGTAGTCCTCTGATTGATGTGGAAGCAGTCTCTGATGATGAAAGTGACATCCACAACAACAGTACTGTAGGGGAGCAAGATGCACGTGTTCTAACATTAGCCGAGCAAATTATCGCTGCCATGCCTGATCGCATCAAGAATGAAAGCGAGGATATGTTGTTAGATGGTAGTCCAGGCCCGCCTGAAACACTCCAATCCAACGATACTCTATCCGATGTTTTCATGGAGCCACTACTCGATCAATCCTCATCTAGTTTCGAATCGGCTGAATTCAATTTCGAATTCTCCGATCATAATTACAGATACTATGATGTTGGTACACCTTGTTCTAGTCTCAGTCCGGCTTCTTCAAGTTGTTTACAATCACCCTGTTCGTTTACTTTAGATTCCCCATCACCACCACCGACAACGGCCGATTTTTGTGAATTCTTCCAAGCTTCCGGTAGTCTATTCGAGAAGGATTTCTCTAATCTAACATTATCAGATCGTGAACAACGCGAACTCTATGAAGCAGCTAAAATTATACAGAAAGCTTATCGTTCATATAAAGGTCGTGTACAACAAGAACAAGATAAAGAACGTGCTGCTGCTATTGTTATACAGAATTATTATCGGCGTTATAAACAATATGCTTATTATAAACAAATGACACATGCAGCTCTAGTTATACAAAACGGTTATCGTTCGTATTGTGAACATAAACGTTTCAAAAAAAGCCAAGAAGCTGCTGTTTGTATACAAAACTATTATCGTAACTATAAAGAACAAGGTGGCGGTAATGGGGGTGGTAGCGGTCGGGGTAGTCGTGAAGGAACTCCAGCTTCCGGTCTCAAACGAACTTATTCACAACGGCGTCAACATCAAGCTGCTAGAAAAATCCAACAATTCATGCGCCAATCGAAGAACAAATTGCAGAAAGAACGAGCCGAAAGAGAGAGGCAGGCGGTCCAGTTAGCGGATGTCCATCAAAAGTCACCGTGTCAAGGGGCCTCCTCCACATGCATCGGCCCAAATAACAGATCAGGTAGTACGAAATTTATGGAAAAATTAAACGATGTCGGCATTAAATAA
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDLNNELEISNFKLQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKDITASTLPSSSSTSNTRPSNGTTDSNNQVTSTTGTGTMLLTNNHSPRVYSRDTRXXXXXXXXXXXXXXXXXXXNSRSGNTPPLVLSLSQLQSSGGLLILNSNSGSSANNSNHQNVITPVSVANFVCNTNSARIKNETRNNHLVLKQEIMETNLSSSSTSSNSTTTSCNNHQSVKQDSKNQRDGMEINDNLRQSVFDSVQYNRQEQSQQQQQKQQQQSSQQQQQQTEVVMSSAPSTPSKQMDTSHDEVIDDFKHRNFCGDTVVLLGTDSSGSLVSKSDNSSIINSGFFNETLDLSQEDIQRTLSANMPLCSSEPPETGNSAHHHHHHHNHHQQQQQQQQQQQQHHQQQHNHQQHQNNKHQQQQTIQQEINPMDFIDSCDVVVSPTHVVDDDVFVNLDAFDMLGEFPDLEALDSGQTGLLDVHPSETNRQEKTTMTNSTNNTETNHGNNQTMEGSAKITDYSPEWAYPEGGVKVLVTGPWHSAGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREEQVTAPEPKIERSNDNLLKFTLLQRLEAMDDRLQIKQEPSDGSDCVEDSVLFSQPNFEDRLVSFCQNMTSRLWRHGEELSVSWFASHRGMTLLHLAASLGYSRLVCALLHWRAENSSLLLETEVDALSQDEDGYTPLMWACSRGHTETAVMLYKWNHTALNMKNTTNQTCLEIARNNNHNELVKELEKLELRRDKANMLLLHSTTNYSSESPSVISPASSIASLSSIASTSKSHDGVFLRPGAVTRSESQKYRMLNLDLDSDGNIIGNNKMLGSTPSPLLSESSASTRSNNGQKLVKRPSIDSGIHMSCGTENSSKSKSSRLLNKDTPKLSKFDRSMSLPLHSPLSARDNFFENESLECGSGRKMDFALCEIGSGPRSSSPLIDVEAVSDDESDIHNNSTVGEQDARVLTLAEQIIAAMPDRIKNESEDMLLDGSPGPPETLQSNDTLSDVFMEPLLDQSSSSFESAEFNFEFSDHNYRYYDVGTPCSSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASGSLFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRVQQEQDKERAAAIVIQNYYRRYKQYAYYKQMTHAALVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGGGNGGGSGRGSREGTPASGLKRTYSQRRQHQAARKIQQFMRQSKNKLQKERAERERQAVQLADVHQKSPCQGASSTCIGPNNRSGSTKFMEKLNDVGIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01022212;
90% Identity
iTF_00813708;
80% Identity
-