Basic Information

Gene Symbol
-
Assembly
GCA_013841185.1
Location
JACDRP010000010.1:366397-368803[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-07 0.00022 20.7 0.0 3 45 3 46 1 47 0.93
2 2 2.9 1.9e+03 -1.5 0.0 13 21 91 99 87 101 0.83

Sequence Information

Coding Sequence
ATGTCCGATTGGAGTATTGATGAAAAGACGCGATTACTGCGTGCTTTAGAGAAATATGGTACGAGTAATATAACGTTAATACAACAAGAATTATCCGATAAAACAATATCGGAGATACGTTTTATGTTTGAGAAATACCGAAAATTAGCATCGATTCGTAATAATCAAAACGAGAAACAATTAGACGAACGTTCGCCGATAAATCAATGGATCGATATTCTGAATCAGAGATTTTCTAGTAAAACTACCGATGATGCTACAGCGAGAGCCTTAAAATATGTCGCCTTGTACGGAAAACATTCAGATAACACTAAAGTTCAATTGAAGGATTGTTATATGGCATTATCGGAGATGTCAACTGGTTCAGTTCCAAAGAAATTAAACCCACATACGAATTATTTCCTATTTCAACATCTATCGAAACTGGCGAATACAATCAAAAAGAAGAAATTGACAAATCATAAGGCCCACATAAAAAATATCAATTTGAAACAGATCGTTGTTAATAAAAAAGAAGCAAATTTAATTTTGAATCCGCTCAATATACCTGAAGAACTACTCAAAAATGAATAA
Protein Sequence
MSDWSIDEKTRLLRALEKYGTSNITLIQQELSDKTISEIRFMFEKYRKLASIRNNQNEKQLDERSPINQWIDILNQRFSSKTTDDATARALKYVALYGKHSDNTKVQLKDCYMALSEMSTGSVPKKLNPHTNYFLFQHLSKLANTIKKKKLTNHKAHIKNINLKQIVVNKKEANLILNPLNIPEELLKNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-