Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_013841185.1
Location
JACDRP010000023.1:1912-3254[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-06 0.0016 18.0 0.0 2 38 271 310 270 316 0.90
2 2 2.9e-11 1.9e-08 33.8 0.1 3 43 355 399 353 401 0.92

Sequence Information

Coding Sequence
ATGAAATTCCAGCTTTTTTCGTTATTAATAATCGGTTTGAATGTTTGTATTGTAACAGCATGGGATGCAGAACAGTTGGAAGTTTTGGATATAATTGATGATGTGAAGGAGAATCTCTACAATATTTTAAATATATCGCAAGATGCTACAAATCAAGAAATTAAATCAGCATTTCGTGGATTATCGCTGAAATTACACCCCGATAAAAATCCAAATGTAGATACATCGGTACAGTTTCGTCATCTAGTTTCAGCCTATGAAGTATTACGAAGTGGTACGAAACGTAAATATTACGATGAATTCCTAGTTAAAGGTCTACCAAATTGGCGATCATCGATTTATTATTATCGATATGTCCGCAAAATGGGCATGTCAGAGGCTTGTATTATTCTCTTATTAATCGTTACAATTGGACAATATTTGATCAGTTGGGCGGCCTATTTCGAACGCAAATACACTCTTGAGCAAAATAAGAAGACTAAAAGGAAGAAAGACCGCGATAAATTCGACGACGAATTGGATTTATTGGTGAAACCTTCGATTTTAGACACTTTACCAATCCAAATACCCCGTCTAATTTGGTACATTTCGATAAATCTAATTCCCTGGTCTGTACAATTGTACAAATTAACATTTCCTGAAAGAATCGAACCAATTGAAGAACCAAAACCTGTTGATTTACCAAAAGAGAAAACTGTACGTAAACGCAATCGTGGTTTCCAACTACCTGAAGGACCAAATTTTGAAAATCCGACAATAACACTCGAATCATCCACAAATTCCCCACCACCGGTCACTGTACGTTCGGGTGGTTTATGGACCGATGATGATTTAGCGGAATTGACACGATTGGTAAAAAAATATCCAAGCGGTACTTTGGGGCGATGGGAATTGATCGCCGATTCAATGGATAGAAGTGTAGAGGAAGTCACTTATATGGCAAATAAAATTAAAGAGAATCTAACGAAATTTGAGGGTGATAAAGTAGAAGAAGAACAGGTTAAATTTAAACAGAAAACAAAGAAAGCTGTTGATGTTAATGATGATGGTAGTGATGTGAAGAATTGGACACAAATCCAACAGAAAGCATTAGAGGAAGCTTTAGTTAAATATCCAAAAGGCTGTGCTGATCGGTGGGATCGTATTGCTGATCATATACCGGGTAAAAGTAAAGAAGAGTGCATGTTGAGATTCCGGTATATCGCTACGATTTTAAAGAAACAAAAAAATACCGAATAA
Protein Sequence
MKFQLFSLLIIGLNVCIVTAWDAEQLEVLDIIDDVKENLYNILNISQDATNQEIKSAFRGLSLKLHPDKNPNVDTSVQFRHLVSAYEVLRSGTKRKYYDEFLVKGLPNWRSSIYYYRYVRKMGMSEACIILLLIVTIGQYLISWAAYFERKYTLEQNKKTKRKKDRDKFDDELDLLVKPSILDTLPIQIPRLIWYISINLIPWSVQLYKLTFPERIEPIEEPKPVDLPKEKTVRKRNRGFQLPEGPNFENPTITLESSTNSPPPVTVRSGGLWTDDDLAELTRLVKKYPSGTLGRWELIADSMDRSVEEVTYMANKIKENLTKFEGDKVEEEQVKFKQKTKKAVDVNDDGSDVKNWTQIQQKALEEALVKYPKGCADRWDRIADHIPGKSKEECMLRFRYIATILKKQKNTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00929502;
90% Identity
iTF_01022147; iTF_00813648;
80% Identity
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