Basic Information

Gene Symbol
ncor1
Assembly
GCA_013841185.1
Location
JACDRP010000116.1:91002-106720[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-07 6.7e-05 22.4 0.0 4 43 495 534 493 536 0.98
2 2 6.2e-10 4.1e-07 29.5 0.3 3 43 969 1008 968 1011 0.94

Sequence Information

Coding Sequence
ATGGCGAACATATGCCCAAATCATAGCCAACCTGTCGCGGACATCTATAAACCTTCTAGGTCACCGTTGCCATTACAGGCATCGGTGGCGGCAACGCCGCCAAATGCACCATCTTCACGTTATCCATATCCGGCATCACCGCAATTACAACAACAACAACAACAACAACAACAATTACCACCAACAACATCCCAACAACAACAACAACAACAATCTAACCTTAATCAAGTACAGGTGTCGATGGCAACCCAACAACAACAACGGTACCCACCCAACGCCACCCCCAATTCTGTTACAACAGTCTTTACAGGCGGCGGTGGCGGTCCTGGGGGTGGAGGTGGTACAACAGTTGGGAATTCTACGACTAGTTATAGGGATTATCGGCCTAATCGAATATCTTTATTACATTCAGAATATGGGACGAATAGTCGGCGTGTTGTTGATTTACAACAACAACAGACAGGTGGTGGTGGGTTGCCACCACCGTCTGGTATTGTACATATTGATGCTATATCACCACAACAACAACAACAACAGGGTGGTGGTCAACAACCGATAAAAAAGATCCGACTACAGGAGCATAAAGATAATTTACAACCCTTACGGATTGATACTAGGCCAGGAATGTACAATCCCCAAGTGGAGGCAATTTCACCAACATTACCCGATCATCTACAACAACAACAAGAAGACCAACAATTCCGTACAACAAAAGATGAATTGATCCAACAAATTGGTAAAGTTGACCGGGAAATTGCTAAAGCCGAATCGCAGATTGCTATTTTAAAAAAGAAACAACAAGAATTAGAAGAGATCGCCAATAAACAACCGTTAATCAAATCGGAAATACAAAATAACGAACAACAACATCTGTTGAAGAAACATCAAAGTTTAGCGCAGAAAATCTACGCTGAAAATCGCATGAAAGCCGCCCAAGCCCATTCGAAATTGGACAATTTGGGGCCGCGCATCGATTGGCCATTGTACAATCAACCGAGCGATACGCAAATCTATCATGAGAATAAACGGAAACATTTGGCGTTCAAAAAACGCCTATTGGAATATTTCAAACGGCGTCATATTGAAAAAGAGACACGCAATACGTATTTGACGGAAACTTATAGTAAATTGATGCAAGAATGGTTGCGTAAAGTCGATAAAATCGAAGCCAGTTCGAAACGTAAGGCGAAAGAGGCGAAAAATCGAGAATTCTTCGAAAAAGTCTTCCCCGAATTGAGGAAACAACGGGAGGATAAAGAGAGATTTAATCGTGTTGGTGCCCGTGTAAAATCCGAAGCCGATATGGAGGAAATCATGGACAATTTACAAGAACAAGCTTTAGAAGATAAAAAAATGCGCAGTTATGCCGTCATACCACCAATCCTATTAGATTCAAAAGAACGTAAATTGGTATATCAAAACGATAATGGCTATATTGGCGATATGGAGGAGGTCTATAAGAGTCGACAATTCTTAAATATATGGACACCGAGCGAAAAGGAGATATTCAAAGAGAAATATCTACAACATCCGAAGAATTTCGGTATAATTGCATCGTTTATTGAACGTAAATCAGTGGCCGATTGTGTACAATATTATTATTTAAGTAAAAAAACCGAAAATTATAAACAATTATTACGTAAATCAAGACAAAGGACACGTTCATCAAGGAATAATACACAGAAAGTTAATAGTAGTGCTAATACATCAGTTGTTGATATTTTAACAACCGGTGTAACGACACGTCTACAACGTGAACAACAACAAAAAACAGTTGGACAACAAAATCGTGAACAACAAACAATAGAAACAACATCCGTCCCATCTACAACTATCACTACGACTACTATAACAACAACAACTGCCACAAGTACAGCAATAACGCCATCTATTAGCGGAATTACGACACAGACTGTAACAATTCTAACCTCAACATCGAATAGTGTGATCAATAATAATAATAATAATAATAATAATAATCCGGTAGCATCAATAACAACAACAAATAATAGTGGTGGTGTCAATAATCAACCACCATCCCCTAAACCTGGTGATAATGCACTTGAACATAATAGTAATAATAATAATAATAATAATCGAAATTTTAATGATTATAATAATTTAATAATAGATGGTGGTAATAATGAACAAAAAACTACATTAAATTTAACAACAACAACAACAATAGCAACGACAACAACCGGAAATTTAGTTGTGACAACAACCGGTCCAATAGCGACATCTACAATTACAACAACAACAACAACAACAACATTGATGAATCAAAAGTTTTTTGGGGACGACGCCAAGGGGGACGGTAGTGTAATGACGGCAGCTGACAGTGCTCACGATGGCGTCGTTAATTTACATAATTTACAAATTAAAAATGAAATCGAGCCGTCCGTTGTCCTATCTGATAATATCAGTAATAATGAAACAAATACAACAATTGTGGAAACGAAAAAGAAGAAAGAACGACGAAAAGATAACCAATTAGAGAGTAGTGATGATGAAACAATTGACATTCATGATAAATCAATACAAGGTACATGTATTGTATGTAATGCCCAATTAGGACCACATCTCCATTCACGTCCATTAATACCAAATCAAGCCCAACAATATGGTTTACGTGAAGACCAAATACCAATAAATGGTGGTGGACGTGTATGTAATACATGCCATTGTAAATTAGTACGTAATCGTTATACACATTGTCCATTACAAACATGTCCAAATTCACGTGGACGTATAAAACGTTTACGTACATTACCACAACGTTTATATGAATTAACAAGCGAAATACGTGAACAAATCTTTCAAGAATTCCATATAACAAAAACAATAACGAAATGTTGTTCAGCATGTTTCAATCGTATACAAAGACGTTTACAACCCTTAGATGAATGGTTAGATGATGATATACAACAATTTAAACAATTATTAAACGAATATGGGGGTAATTGGCAGGTAATTAGTGAACGTTTAAAAAAATCGAAACAACAAGTACGGAATTTCTATTGTTTGAATCGTAAACGTTATAATTTCGATTTATGTTTACGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAATTAGTGGGGGTGGTGGTGGTGGTGGTATTGAGCGGAAACCAACGTTAACGGATGAAGAGGAGAGTGGTTCGACTACATCAAGTTGTGATGAAACAACAACAAAAACAACAACAACACCAACAATTACAACAACAACAACAACAACAACAACAAATAATAATAATAATAGTAATGTTGTTGTTGTTGGTAGTAATAGTAATAGTAGTAGTAATAGTGGTGATCGTCATTCTAGTGATACCGCAAGTGCTGCGGAAAGTCCACCGGTGATTATCAATCAAAATCAAGCAATCATAAAAAAGGAGGATTATGATAGTTCGGCTACGGAAACGGCCGATGAGGCGCAAACACCCGATCATTATCAAAATAATCACAATAATAGTGGTGGTAATATTAGTGGTGGTGCTACAATTACCCCAATTATCAATACAAATACTGATAATTTGTTACAACAACAACAACAATTACGACAAAATTCATCCCCTTTAAGTGTTAAAGATTTAGTTTTGAATGTTATCGAATTTTCATTAATGAAAAATCCAAATCAAATCCAACAACAACCCCAACCCCAACCCCCATCAACAAGTGGTATAAATATGGCGCCGACTATATCGTCAATTTTAAATAATGATTCCAATGAAGTTACTATTGTTAGTGAATATAATTTAAATACACCACCACCACCACCACCCCCTACTACAACCCAACGATTATTACCCCCACAACAACAACAACGCAATAGTGATTTATCTTTAGCAAAATTGGTAACACCCTTAATTGGTGCTACTATAACACCAGTACCACCACAAATCCATCATCACCACCACCACCACCAACACCACCCCCAACAACAACAACATCATCATTTAGAGAATCCGGTGCGTAATGATGATTTGGTGGTGTTGTCGGTGCAAAGTGAACCGGAAACTTTGGATTTGAGTATTAAGAAACCACGAGAACCACCCCCGGCGCATTGTGGTAAATCTTTACAATATTTAAATTATCATCAACCCCAACAACAACAACAACAACAACAACAACAACACGAGCGAAAAAGTCCGGCATATTCGTCGATACGACACCATCAACAACAACAGGGGAAGTTGCCGAGTCCGAAATTGGCAAATCCAAAAAGTGGTTCGATTACTTTAGGGACGCCGATTATAAATCAACCCCGTTATGATGGGGGTTTATTGAGGCAAATTCCCAATAGTAATAGTGGATTGACTGTGATACCACAATTGACACAACAACAACAACAACAACAGCAACAACAACAACAAGAGACGAAAATGGGGTCGATTACCCAAGGCACCCCTATTCATATTTCCCATCTACAACCCGATAAACGTTTATATGAATATTTTAATAAACGTAACAGCCCTAATATTGTTAATAATAATTATCAAACAACCCAACAACAACAACAACAATATAGACAACCGTATGGGGTTGAACAACAATTAACTTCAAGACAGATTATAATGAATGATTATATAACATCGCAACAGATGATAAGTAGACGGAATGATAAGGGTGGTTATTATCCGGCGAATTCGCCCCATCGGACACCACCCCCTCAACAACAACAACAACAAGTACAACAACAACGTCAAGGGGTAATACAAAGACATACACCCCGTCCGCAATATTTACAACCGGGTCATGAAGCCTTATCAAGTTTAGTAGATGTAGCTGTACAACAACCAAGTCTACCGGTACCAAATCAAACCCCCCATGAGGGGTTGGGTAAAACTATGGTTGATAATATAATGGAACAACCCCAACGTTTACATATAATCCAACAACAACAACAACAATTGAGGCAACAACAACAACGAATTGAGGAACAACAACGGAGGGTTTATCACCATCAACAACAACAACATCACCAACAACAACAACAACAACAACGCTCGAGAAATAGTGGGGGTGATTCGTCTACTTTAACTGCAGCTAGTTTGATTGATGCAATTATAACGCATCAAATTAATCAAACTGCCGATGGTGGGCGGGGTGGTGAAATTGTGGCGAATTCACGGGAACCACCCCGTGCTGGTGATTTGTTGTTTCAGAGTTTCCATAGGGATCCACCGCCACCACCACCGCCACCCCCTCAACAACACCAAGAGGAACAACGGCCACCCTCGGTTATAAGTATCGATTTGGATTCGGATAATAAGAGTTTGACGGTTAAAGAATTGACAGATTCGGTGATTAGTCATGATTTTAGTACACGTCCGCATTATAGTTATCATTTACAACAACAACAACACCAACAACAACAACAAGAGGCGCTTGATTGGAAACGGCGGTTGGTTGCCCAGCAACAACAACAACAGAAAGATGAAGTGAACAAACGAGCATCGACACCCCTACAACAACAACAACAACAACAACAACAAGATGAACGCCAAATTATAAGAATTGCCCAAACGGCGAAATATCACGTTGAACCGGTTTCACCCCCTGATAATCATTGGACAAATGAGCCGAATTATCGAAGATATCCGCCTATTACCCAACAACAACAACAACCGGTAACAACAACAATAACAACAACAACAACACAACAACAACCCCAATCGCATATATCGGCTTTAGATTATGTTAAAAATCGTATAGTTGAAGTGATGCGTACTGAAGATGATAAGAAGGACGTTCCTGATAATACAACAACAACAACAACAACAATAATAACAAATTCACCCCCTATAACAACAAATACAACGCCAATTACTACAGCAAGTACAACAACAACATCGACAACTCCAACAACAACAACAACAACGACACCCCCACCACCCCAAACAACAACAACAACAACAACAACCGAGAAAGATCGCAATAGTGATAGTCCAGGTGAGATGGTGATAGACGAAGATAAAACAACAGAAACAACGCCACCTATTGCCACAACTATAACAACAACAACAATAACAGCAACAACAACAACAGAAACAACAACAACAGCAACACAAGACGAATCGCAGCAACCTTATAGTTATTCATTTGTTCATAAAGATAATAGTGCAACAACAACTACTACTACAAGTAATACAAGTGGTAATAATTCGGGTAATAGTGGTGGTAATACGAATAATAATAATAATAATAATAATGAACCGAAACCGTTATTATCAGCCCAATATGAACCTTTATCAGATGAGGATTAA
Protein Sequence
MANICPNHSQPVADIYKPSRSPLPLQASVAATPPNAPSSRYPYPASPQLQQQQQQQQQLPPTTSQQQQQQQSNLNQVQVSMATQQQQRYPPNATPNSVTTVFTGGGGGPGGGGGTTVGNSTTSYRDYRPNRISLLHSEYGTNSRRVVDLQQQQTGGGGLPPPSGIVHIDAISPQQQQQQGGGQQPIKKIRLQEHKDNLQPLRIDTRPGMYNPQVEAISPTLPDHLQQQQEDQQFRTTKDELIQQIGKVDREIAKAESQIAILKKKQQELEEIANKQPLIKSEIQNNEQQHLLKKHQSLAQKIYAENRMKAAQAHSKLDNLGPRIDWPLYNQPSDTQIYHENKRKHLAFKKRLLEYFKRRHIEKETRNTYLTETYSKLMQEWLRKVDKIEASSKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARVKSEADMEEIMDNLQEQALEDKKMRSYAVIPPILLDSKERKLVYQNDNGYIGDMEEVYKSRQFLNIWTPSEKEIFKEKYLQHPKNFGIIASFIERKSVADCVQYYYLSKKTENYKQLLRKSRQRTRSSRNNTQKVNSSANTSVVDILTTGVTTRLQREQQQKTVGQQNREQQTIETTSVPSTTITTTTITTTTATSTAITPSISGITTQTVTILTSTSNSVINNNNNNNNNNPVASITTTNNSGGVNNQPPSPKPGDNALEHNSNNNNNNNRNFNDYNNLIIDGGNNEQKTTLNLTTTTTIATTTTGNLVVTTTGPIATSTITTTTTTTTLMNQKFFGDDAKGDGSVMTAADSAHDGVVNLHNLQIKNEIEPSVVLSDNISNNETNTTIVETKKKKERRKDNQLESSDDETIDIHDKSIQGTCIVCNAQLGPHLHSRPLIPNQAQQYGLREDQIPINGGGRVCNTCHCKLVRNRYTHCPLQTCPNSRGRIKRLRTLPQRLYELTSEIREQIFQEFHITKTITKCCSACFNRIQRRLQPLDEWLDDDIQQFKQLLNEYGGNWQVISERLKKSKQQVRNFYCLNRKRYNFDLCLRXXXXXXXXXXXXXXXXXXXXXXXXXXXTISGGGGGGGIERKPTLTDEEESGSTTSSCDETTTKTTTTPTITTTTTTTTTNNNNNSNVVVVGSNSNSSSNSGDRHSSDTASAAESPPVIINQNQAIIKKEDYDSSATETADEAQTPDHYQNNHNNSGGNISGGATITPIINTNTDNLLQQQQQLRQNSSPLSVKDLVLNVIEFSLMKNPNQIQQQPQPQPPSTSGINMAPTISSILNNDSNEVTIVSEYNLNTPPPPPPPTTTQRLLPPQQQQRNSDLSLAKLVTPLIGATITPVPPQIHHHHHHHQHHPQQQQHHHLENPVRNDDLVVLSVQSEPETLDLSIKKPREPPPAHCGKSLQYLNYHQPQQQQQQQQQQHERKSPAYSSIRHHQQQQGKLPSPKLANPKSGSITLGTPIINQPRYDGGLLRQIPNSNSGLTVIPQLTQQQQQQQQQQQQETKMGSITQGTPIHISHLQPDKRLYEYFNKRNSPNIVNNNYQTTQQQQQQYRQPYGVEQQLTSRQIIMNDYITSQQMISRRNDKGGYYPANSPHRTPPPQQQQQQVQQQRQGVIQRHTPRPQYLQPGHEALSSLVDVAVQQPSLPVPNQTPHEGLGKTMVDNIMEQPQRLHIIQQQQQQLRQQQQRIEEQQRRVYHHQQQQHHQQQQQQQRSRNSGGDSSTLTAASLIDAIITHQINQTADGGRGGEIVANSREPPRAGDLLFQSFHRDPPPPPPPPPQQHQEEQRPPSVISIDLDSDNKSLTVKELTDSVISHDFSTRPHYSYHLQQQQHQQQQQEALDWKRRLVAQQQQQQKDEVNKRASTPLQQQQQQQQQDERQIIRIAQTAKYHVEPVSPPDNHWTNEPNYRRYPPITQQQQQPVTTTITTTTTQQQPQSHISALDYVKNRIVEVMRTEDDKKDVPDNTTTTTTTIITNSPPITTNTTPITTASTTTTSTTPTTTTTTTPPPPQTTTTTTTTEKDRNSDSPGEMVIDEDKTTETTPPIATTITTTTITATTTTETTTTATQDESQQPYSYSFVHKDNSATTTTTTSNTSGNNSGNSGGNTNNNNNNNNEPKPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-