Hpha009892.1
Basic Information
- Insect
- Hycleus phaleratus
- Gene Symbol
- -
- Assembly
- GCA_013841185.1
- Location
- JACDRP010001831.1:786-2367[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-09 5.2e-06 25.6 0.0 2 39 11 48 10 52 0.87 2 2 6.4 6.6e+03 -3.6 0.1 31 41 265 276 265 278 0.77
Sequence Information
- Coding Sequence
- ATGGGGAAGGTTGACCATAGGAAGTGGAGTCCGTCTAAAATGGCTAAAACTATTGACACAGTCCGAACAAAGAAGATGGGCTGGAAGAAGGCTTCCAAGCAATTTAATGTACCAAAAACAACCCTTATGAGGCTGTCTAACATGAAATACGGTACTCCTGAGGAGGCAGCAAAAGCAAACAAAGGTAGGCCCACAGATCTGGGGAAAGATCTTGAAAAAAACATTAACGTCTATGACAAAGAAAAATTCACACCAGACCGAATCTATAAGGTTGATGAGACTGGAATTACTATGGTACAATCTAAAGTACCAAAAGTAATTGAACTTAAAGGCAAAAAACAGATAGCTGCACTAACATCAGGAGAACGTGGTGCCCTTATAACTGTTGTTGCCTGTATGAATGCTAGTGGATCATTTGTTCCACCTTTAGTAATTTTCCCAAGGAAAAACATGAATGAGCGGTTAAAAAAGGGAGCCCCACCTAGAACACAATTTGCAGTACACCCATTGGGATGGATCCAAATAAACTCATTCACACAGAACATTGACGTTATTGATTTGGCAAAAGCCAATTTCGTAACCATTGTGTCCCTGCCTCCTCATTGNTGCTTGCGGCTTAATGAACGTGCTCTCAGTGCTTTTGATGTAATGGGCCTGCTTGGCAAAGCCTACATTAAATGCCAAACAGCTGAAAGAGCCATTAATGGATTTAGAGTGACCGGAATATATCCTCTAAATAAGACGTTATTCTCGGATGCCGAATTCATTGAAGAGGCAAACAAGAAACAAGATTCAACTTTCTATGAATCAGTGCTAAAGAAAAAAACTACAGAAAATCAGCAGTTTGACCCGAATCAACCAACAACATCATCAGCAGGACAGTGTGTTATTATGTCACCAGCTAACCTTGATAACTCCAAGGTGAAGAAGACAGCGTCTCGAGTGGGTCATCTGTAA
- Protein Sequence
- MGKVDHRKWSPSKMAKTIDTVRTKKMGWKKASKQFNVPKTTLMRLSNMKYGTPEEAAKANKGRPTDLGKDLEKNINVYDKEKFTPDRIYKVDETGITMVQSKVPKVIELKGKKQIAALTSGERGALITVVACMNASGSFVPPLVIFPRKNMNERLKKGAPPRTQFAVHPLGWIQINSFTQNIDVIDLAKANFVTIVSLPPHXCLRLNERALSAFDVMGLLGKAYIKCQTAERAINGFRVTGIYPLNKTLFSDAEFIEEANKKQDSTFYESVLKKKTTENQQFDPNQPTTSSAGQCVIMSPANLDNSKVKKTASRVGHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -