Basic Information

Gene Symbol
ct
Assembly
GCA_013841185.1
Location
JACDRP010000031.1:72196-85971[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7e-28 4.4e-24 83.8 0.0 2 72 438 509 437 514 0.95
2 3 1.3e-32 8.1e-29 98.9 0.0 2 77 835 911 834 913 0.96
3 3 1.4e-30 8.9e-27 92.4 0.0 3 75 1079 1152 1077 1156 0.95

Sequence Information

Coding Sequence
ATGGCTGATAATCAACGTATCAATCAACTATTGGAAGAAGTACAAAGACTCCAGACGACCGTATCGAAATTAAGAGAATCGTCAGTAACGCAAATATCACGTTTAGAAGATCAATTAGAACAAAAACGACAACATATTGTTAGATTAGAAGCTAAATTAGATTCACAAAGGGATTATGATGATCTTAAACGGGAATTAAGTCTTCTTCGGCCGGATCTTTCAGCAAATCCCGATGTTAAATCAATCGAATTATTATTAGAAAAAGCGAAAAGTTTACAACATCAACAACATCAACATCAACAACAAGATAGAGTTAGAACGCCAACATCGTCATCTTCATCGTTATCTTCATTATCAACATCACAGACGTCAATAGGTACAGTAACAACGTTATCAACAACAACAGCAACAACAACGACGACGGTGACGAGGCCGACGACGCCGTTAACAACAACAACGACGGCGATTACAACAACAACATCAACAACGACGCAAGAACTTGAAGGGGTTGTAAATCTACCGTCTTCACAATCGGACGCATCCCCATCTATCCCACCACCACCTACACCACCATCCACATTACCACATCCATTTCATAACGTCGAAACATTCGGTAGTATGTTAGGTGAAGAGATTGTTGCAAATTGGCGTCGTAGTATAGAACAAATCTCCTTAAATAACCGAATAATATCCCGATCACCATGTACAGATGCATCGGCGATGGCGGCAGCAGCAGCAGCGGCAGCGGCGGCGGCAGCAGCAGCATCGGTAGCAGTACAAGCATCAGGTGGCAATGGGGCAATAGGAACAAATGCAACAACAGCAACAACAACATCATCATTAACAACACAAATAATCCCAACAAAATCATCAACACCAATGACTGAATCAACCGAGAAATCATCGAGTGATCCAACAACACCTATTAGTGATGTTTTACAACCACAACAACAAAGACATTCACCAATTGAACCATTAATTAATGGCAATCCGCGAAGTCCAGACGATAGTAATCATCACCAACATCATCATTTAAACAATAACAACAACAACAATAGTAATAATAACAATAATAATATACCAATATCAGCAATGTGTGCAGTGAATAGTTTCTTACGTAATGATGATACATTAAAAAGTCCATATCGGTTCGATGATCATCATCGATCACCATTTCGTTTCGCTGATGATTTAGGTATTGGACCACCGGGTGCAATGGTTGGACGTTTAGGTGAAAGTTTAATACCAAAAGGTGATCCAATGGAAGCCAAATTACAAGAAATGTTACGTTATAATATGGATAAATATGCATCGCAAAATTTAGATACATTACATATAGCTAGACGTGTTAGAGAATTATTATCAATACATAATATTGGACAAAGATTATTTGCTAAATATATATTAGGTTTATCACAAGGTACAGTTTCGGAATTATTATCGAAACCAAAACCATGGGATAAATTAACGGAAAAAGGACGTGATAGTTATAGAAAGATGCATGCATGGGCGTGCGATGAACAAGCTATCTTATTACTTAAATCACTTATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGATACTAGTATGCCTCCAACATATGGACGTCCTGATAATGATCTAACAGAAGAACGTATTGCACATATATTAAATGAAGCTAGCCAATTTCAACAATTGAAAACCAAAGATAGTCATAGTAATGATGATTCAAATTCACCACATGGTCAATGTTTAAGTCCATTTTCAAAAGATTCATCACAGAATCGTCGACTGAAGAAATATGAAAATGATGATATACCACAAGAGAAAGTTGTACGAATTTATCAAGAGGAATTAGCAAAATTAATGGGTAGACGTATGGATGATATACGAAATCCACGTGATACATTTCCTGGTATGTTCTTTCCACAATTATTTAGTGGTGGACAAATGGATCGTACACAAGAAGAAATACGTATGGCATTAGATGCATATCATCGTGAAATTGTTAAATTAAATCAAAGCCAAAATCCTGGACAAATACCAAATTTAGGTTTATTAGCATTACAACAACAAGCATTAGTACAACATCAAAATCCATCGAATGGTAATAATCAAGGTGGTGTACAAGATTTATCATTACCAAAAGATAAAACGAAAACATTAAATGGTAATGATGATAAAGATACCAAAGATACATCAATTACAACAACAAATGATGAGAATTTAAGACATTCCGGTAGTGCATTCAGTTTAGTACGACCAAAAATTGAACCGGGTACAACACCACAACAATCTAGTGGTTCAACAGCATCAAGTCCATTGAGTAATACAATTTTACCACCGGCAATGACACCAAATGATGATTTTAGTGGATCAACAGTTGCTAGTCCATTACAAAGGATGGCATCGATAACAAATTCGTTAATATCACAACCACCAACACAACCCCATCATACATCATCACAACGTCCATTAAAAGCCGTATTACCACCGATAACACAACAACAATTCGATCAATACAACAATTTAAATACTGAAGATATTGTTAAGAAAGTTAAAGAACAATTAAGTCAATATTCGATAAGTCAACGGTTATTTGGTGAATCTGTATTGGGATTATCGCAGGGTTCAGTTAGTGATTTATTAGCACGACCGAAACCATGGCATATGTTAACACAAAAAGGCCGTGAACCATTCATACGTATGAAAATGTTTCTAGAAGATGATAATGCTGTCCATAAATTAGTTGCTAGTCAATATAAAATTGCACCGGAGAAATTAATGCGAACTGGTGGTTATGGAGGTGGCAGTTCAATTGGTAAACCAATACCACCAACACCGAAAATGTTGAGCGAAGCGGCTGCTGCTGGATTGATAACAAAAATGCAAGAAAATCCAAATTTATTACCACCATCATTACAATTAGGACCACCGCCACCAAGTCAAAATCCACAAAATCAACAACAAAGTGGCGGTGGTGGTGGTAGTGGTAGTGTTGGGAGTGGTAATGGACCACCACCACCACCACCAATGTTATTAACACCACCTGGTGTACCACCACATCATGCTATCAATCTACAAAATCCGGAACATTTGAAAAAATCCAATCCAAGTCCGCATAGTACTGGTAGTAGTAGTGGTACTACAACTGGATTACCACCACATTCACCAATGTCACAACATCAAGTATCATTGAGGAATATGCATCAGCATATGTCGCCGAGTGTTTATGAAATGGCCGCATTAACGCAAGATTTAGACACACAAGTGATAACAACAAAGATCAAAGAAGCATTATTGGCTAATAATATAGGACAAAAGATTTTCGGTGAAGCTGTCTTAGGTCTATCACAAGGTTCAGTTAGTGAATTATTATCAAAACCAAAACCATGGCATATGTTGAGTATAAAAGGACGTGAACCATTTATACGTATGCAATTATGGTTGAATGATGCACATAATATTGATCGTTTACAAGCATTAAAAAATGAACGTCGTGAAGCTAATAAACGTCGACGTAGTAGCGGTCCTGGTGCACATGATAATAGTTCTGATACATCATCGAATGATACATCCGAATTTTATCATTCAAATTCACCAGGACCTGGACCAACATCAGCTAAAAAACAACGTGTATTATTTAGTGAAGAACAAAAAGAAGCATTACGTTTAGCATTTGCATTAGATCCATATCCGAATGTTCAAACAATTGAATTTTTAGCAAATGAATTAGGTTTAAGTAGTCGTACAATAACGAATTGGTTCCATAATCATCGGATGAGATTGAAACAACAAGTACCACATAATAATAACAATAATAATAGTAGTAGTAATAATAATAATAGTGATTTATCTCCAACAACAACAACAACAACGACGACGACAACTACAAATACAACAAGAGATCAACAACAACAACAACAAGGACCATTTGATCCTGTACAATTCCGACTGTTATTAAACCAAAGATTATTAGAACTATCAAAAGAACGTATGGGATTGACTGGTGTACCATTACCATATCCACCATATTTAACAACAACAAATACAAATTTAGCAGCATTAATTAGTCGTGGTTCATTACCGGCAGCAGCAGCAGCCGCTGCTGCTGCTGATGTTGATCTATCAGCATTAAATAGTGTTGTTAAAGAACAAATGAGTGGTTTAGATTTATCAATGACAACATTAAAACGTGAACCACATGATTTTGATGATGTTGTTGATGATGATGATGTTGGTAGTAATGTTGGTTCAGAAGATTCAAATATTAGTAGTAATCATAGTTTAATTAAAAGTGAACATAAAGAACAATCAACAACTGTACATTTACCACCACCACCACAACAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATAATAAATGGTGTATGTGTGATGCAAACAAGTGATGATTATGGGCGTACGAATCGAACAAATGAAGAAACAATAAGGATTGAACCGACACCTGTTTTAGATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGTGGGATTATTGA
Protein Sequence
MADNQRINQLLEEVQRLQTTVSKLRESSVTQISRLEDQLEQKRQHIVRLEAKLDSQRDYDDLKRELSLLRPDLSANPDVKSIELLLEKAKSLQHQQHQHQQQDRVRTPTSSSSSLSSLSTSQTSIGTVTTLSTTTATTTTTVTRPTTPLTTTTTAITTTTSTTTQELEGVVNLPSSQSDASPSIPPPPTPPSTLPHPFHNVETFGSMLGEEIVANWRRSIEQISLNNRIISRSPCTDASAMAAAAAAAAAAAAAASVAVQASGGNGAIGTNATTATTTSSLTTQIIPTKSSTPMTESTEKSSSDPTTPISDVLQPQQQRHSPIEPLINGNPRSPDDSNHHQHHHLNNNNNNNSNNNNNNIPISAMCAVNSFLRNDDTLKSPYRFDDHHRSPFRFADDLGIGPPGAMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEQAILLLKSLIPKKDNFSSGKDTSMPPTYGRPDNDLTEERIAHILNEASQFQQLKTKDSHSNDDSNSPHGQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMDDIRNPRDTFPGMFFPQLFSGGQMDRTQEEIRMALDAYHREIVKLNQSQNPGQIPNLGLLALQQQALVQHQNPSNGNNQGGVQDLSLPKDKTKTLNGNDDKDTKDTSITTTNDENLRHSGSAFSLVRPKIEPGTTPQQSSGSTASSPLSNTILPPAMTPNDDFSGSTVASPLQRMASITNSLISQPPTQPHHTSSQRPLKAVLPPITQQQFDQYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGGSSIGKPIPPTPKMLSEAAAAGLITKMQENPNLLPPSLQLGPPPPSQNPQNQQQSGGGGGSGSVGSGNGPPPPPPMLLTPPGVPPHHAINLQNPEHLKKSNPSPHSTGSSSGTTTGLPPHSPMSQHQVSLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLANELGLSSRTITNWFHNHRMRLKQQVPHNNNNNNSSSNNNNSDLSPTTTTTTTTTTTNTTRDQQQQQQGPFDPVQFRLLLNQRLLELSKERMGLTGVPLPYPPYLTTTNTNLAALISRGSLPAAAAAAAAADVDLSALNSVVKEQMSGLDLSMTTLKREPHDFDDVVDDDDVGSNVGSEDSNISSNHSLIKSEHKEQSTTVHLPPPPQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINGVCVMQTSDDYGRTNRTNEETIRIEPTPVLDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00813505;
90% Identity
iTF_00813610;
80% Identity
iTF_00814296;