Basic Information

Insect: Hycleus cichorii
Gene Symbol: zfy1
Assembly: GCA_013841215.1
Location: JACDRQ010000060.1:172546-173901[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0075 0.51 10.4 0.6 1 23 93 115 93 115 0.96

2 8 5.3e-05 0.0036 17.2 1.0 1 23 121 143 121 143 0.97

3 8 0.0001 0.0071 16.3 0.2 1 23 170 193 170 193 0.92

4 8 6.7e-08 4.6e-06 26.3 0.3 1 23 199 221 199 221 0.98

5 8 0.00048 0.033 14.2 0.1 1 23 227 249 227 249 0.97

6 8 1.7e-05 0.0012 18.8 0.8 3 23 256 277 255 277 0.97

7 8 0.15 10 6.4 0.4 12 23 322 333 320 333 0.93

8 8 0.0011 0.073 13.1 4.8 1 20 338 357 338 359 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0075	0.51	10.4	0.6	1	23	93	115	93	115	0.96
2	8	5.3e-05	0.0036	17.2	1.0	1	23	121	143	121	143	0.97
3	8	0.0001	0.0071	16.3	0.2	1	23	170	193	170	193	0.92
4	8	6.7e-08	4.6e-06	26.3	0.3	1	23	199	221	199	221	0.98
5	8	0.00048	0.033	14.2	0.1	1	23	227	249	227	249	0.97
6	8	1.7e-05	0.0012	18.8	0.8	3	23	256	277	255	277	0.97
7	8	0.15	10	6.4	0.4	12	23	322	333	320	333	0.93
8	8	0.0011	0.073	13.1	4.8	1	20	338	357	338	359	0.92

Sequence Information

Coding Sequence: ATGGAATCTTGTTGTAGGTTATGTCTGAATAAAAATCTCGATGAGTTAGAATCGACAGTATTTCTAAATAATTTGCAAAACAAAATTAAAGTTTGCGTCAACATTACAATAACAGAATATGACGGATTACCAACACTTCTATGCAGAAATTGCATCAATAAAATAGAAGATTGGTATTCATTTCGACTAGATTGCCAGGGATACGACGAAATTTTGAAACGAAAATTGTATAAAATACAAAATAATCTACCAGAAATTGAAGAAACTGGCAATGTCTACGATTGTACCATATGTACCCAACAATTCGATACTTTATTCGGATATTTGGACCATCAAAACGACCACAACGGCCAGCCTGAATTCCAATGCGACTATTGTCCTGAAATTTTCGACCATCGGGACAAATTAGTTCAACATGAAAACAACCACACCGAATTGTGTCCTTTATGTCCGCTGAAAATCCTGAAAACTAGCATGAAACTACATTTAAATCAACACACCGATCGCTACAGGTGTGATGAGTGTAACAAAAGCTTCAATTCCAACGCGATTTTATCACAACACATAACGGCAGTTCATACGAACCGTAAAGATTACATTTGTGACACTTGCGGTAAAGGTTTCTCGTCGAAAACATCACTAATTGTACACATACGTTCGCATAGTGATCAGCGTTTGTATAAGTGTAACTTATGTGATTATGCCGGACGTACGGCTTCAGCTTTATATATCCATAAAGCGATACATTCGAAAGAAACCCGTATTTGTGAGATTTGTTCGAAATTATTTAAAAGTTTGCGCAATTTAAATGATCACCAAAGACGGGTTCATTGTAAAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGTTCGGATAGTTTAAAACAACATATGTTAACGCATATCGAACAACAATTCGAGTGTTCTAAATGTGGAAAGAAATTTGCATCTAAAAAGACGAGGAAACGTCACAATTGTACCAAAAATTGTTGA
Protein Sequence: MESCCRLCLNKNLDELESTVFLNNLQNKIKVCVNITITEYDGLPTLLCRNCINKIEDWYSFRLDCQGYDEILKRKLYKIQNNLPEIEETGNVYDCTICTQQFDTLFGYLDHQNDHNGQPEFQCDYCPEIFDHRDKLVQHENNHTELCPLCPLKILKTSMKLHLNQHTDRYRCDECNKSFNSNAILSQHITAVHTNRKDYICDTCGKGFSSKTSLIVHIRSHSDQRLYKCNLCDYAGRTASALYIHKAIHSKETRICEICSKLFKSLRNLNDHQRRVHCKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSDSLKQHMLTHIEQQFECSKCGKKFASKKTRKRHNCTKNC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00814627;
90% Identity: iTF_00814627;
80% Identity: -