Hcic009402.1
Basic Information
- Insect
- Hycleus cichorii
- Gene Symbol
- RCOR3
- Assembly
- GCA_013841215.1
- Location
- JACDRQ010000038.1:270688-274721[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-09 1.5e-06 27.7 0.0 3 46 130 173 128 173 0.97 2 3 2 1.6e+03 -1.2 0.8 36 44 271 279 271 280 0.88 3 3 2.5e-14 2e-11 43.4 0.0 3 46 378 421 377 421 0.98
Sequence Information
- Coding Sequence
- ATGGTCTTGGCTGAGAAAAATACAGAAAGTACGAGAAACGGTCGGCGAAGCCGCGGTCCAAGTCCGAACGGTCACGTCCAGGATTCGACCAGTGAAGATGAAGGCTCAGCCCCAGCTGACAAAATCCGCGTTGGACGTGACTACCAAGCCGTTTGTCCTGAACTGCAACCGGAATCCCAACGGAAACCGGAGCTGTTGGCCGATAGAGCCCTACTAGTTTGGTCACCGACTGAATCAATACCAGAATCGAAACTGGAAGATTATATAATCCTGGCCAAAGACAAGTACGGTTATAACGGCGAACAAGCCCTCGGTATGCTGTTCTGGCACAAACACGACTTAGATAGGGCCGTATTGGATTTAGCGAATTTCACACCATTCCCCGATGAGTGGTCAGTGGAAGATAAAGTTCTGTTCGAGCAGGCATTTCAGTTTCATGGTAAAAGCTTCCATAGAATTAGACAAATGTTGCCCGATAAAAGTATCGCTAGTTTAGTCAAATATTATTATAGTTGGAAAAAGACCCGATCTAGGACTAGTCTAATGGATAAACAAGCGAAGAAATTGAATACACCAAAAGAGGAGGGCGGTGGGGCGTCTGAGGGCGGCTCGGAAGGTGGATCTAATGAAGATTCCGATCATGATGAGAAGAAATGGACAATACATCGTGGCATTCGACGTAAAAGCGGTTCACCAAGTCGTACGGGTCAGCCTTCCGACGACAACGCTACTCAGGGTGAGGGTGGCGCGTGTTCTAACTGCGGAGTCGTCTGTACCGTCACACATGTGACATCAAAAGGAGCCCTTTGTAATTCCTGCTATCAACATTGGAGACGAACCGGATCATTGCGGCCCACGTCCGGGCCAACGGGTGGTAAGCGTGGTTCACCACTTGGTGTACGGCATAAACGCAAACCGCCACGCGGCATGTACATCAACCATGATGATTTGGCTGCGATGGCGTCAGGCACTGCCGGTGTTCTCATGTTAAAAGCAATGGATCGAGAATTAGATTCACTACAAAGACAAATTCAACAAAATAAACAAAATATCAGTTCGTTGAAACGTAAACACTCAGATTCTATAGAAGATCTCCGTCCAAATAATGATAATTCGTCACGTATAAACGCCCGTTGGACAAATGAGGAATTACTATTGGCTGTACAAGGTGTACGTAAATATGGTAAAGATTTTAAAAGTATTGCAGAAGTATTGGGCAATAAAACTGAACATCATGTACGTACATTTTTTGTAAATTATCGTAAACGTTATAATTTGGATAGTGTGTTAAAAGACTGGGAGAAAGATAACGGTCCATTACCATCCGACGATAATAATTCCTCATCGGATGTTAAAATCGAAATAGATGATTCAAATAATACAGATAATGATGTTATTTGTATATCACCAACACCAACTACTAAAAAGGATATGAAAAATGGGAAAGTTACACAAATTAGTAAATGA
- Protein Sequence
- MVLAEKNTESTRNGRRSRGPSPNGHVQDSTSEDEGSAPADKIRVGRDYQAVCPELQPESQRKPELLADRALLVWSPTESIPESKLEDYIILAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQAKKLNTPKEEGGGASEGGSEGGSNEDSDHDEKKWTIHRGIRRKSGSPSRTGQPSDDNATQGEGGACSNCGVVCTVTHVTSKGALCNSCYQHWRRTGSLRPTSGPTGGKRGSPLGVRHKRKPPRGMYINHDDLAAMASGTAGVLMLKAMDRELDSLQRQIQQNKQNISSLKRKHSDSIEDLRPNNDNSSRINARWTNEELLLAVQGVRKYGKDFKSIAEVLGNKTEHHVRTFFVNYRKRYNLDSVLKDWEKDNGPLPSDDNNSSSDVKIEIDDSNNTDNDVICISPTPTTKKDMKNGKVTQISK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566170;
- 90% Identity
- iTF_01366259;
- 80% Identity
- -