Hcul021695.1
Basic Information
- Insect
- Hybos culiciformis
- Gene Symbol
- nfxl1
- Assembly
- GCA_964007475.1
- Location
- OZ023274.1:105798542-105805143[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.5 2.1e+04 -3.7 1.5 15 19 190 194 189 194 0.81 2 18 0.72 9.7e+03 -2.7 0.9 4 10 225 231 225 231 0.91 3 18 3.1e-08 0.00043 20.8 17.0 1 19 239 256 239 256 0.99 4 18 8.3e-05 1.1 9.9 12.3 1 19 292 309 292 309 0.95 5 18 3.4e-07 0.0047 17.5 11.8 1 19 344 362 344 362 0.99 6 18 7.8e-07 0.011 16.4 14.7 1 19 397 415 397 415 0.97 7 18 0.68 9.2e+03 -2.6 0.4 1 5 424 428 424 433 0.73 8 18 1.7e-06 0.023 15.3 18.8 1 18 449 466 449 467 0.98 9 18 5.5e-08 0.00074 20.1 12.9 3 18 478 493 470 494 0.85 10 18 0.65 8.8e+03 -2.6 1.2 5 10 522 527 522 527 0.92 11 18 2 2.7e+04 -5.2 9.3 9 19 540 550 531 550 0.87 12 18 0.0015 21 5.8 6.0 3 12 563 572 553 572 0.83 13 18 0.47 6.3e+03 -2.1 0.8 6 10 630 634 629 634 0.89 14 18 3.6e-06 0.048 14.3 5.8 1 12 640 651 640 651 0.96 15 18 1.3 1.8e+04 -3.5 1.3 6 10 667 671 666 671 0.84 16 18 0.02 2.6e+02 2.3 12.6 3 18 680 695 679 696 0.94 17 18 2 2.7e+04 -6.0 2.8 10 13 703 706 702 711 0.67 18 18 3.8e-07 0.0051 17.4 11.5 1 17 747 765 747 767 0.86
Sequence Information
- Coding Sequence
- atgtccGAAAGCAATAACAAATCGACCCATCATTGGAcacggaaaaataaaaaacagactCAAAAGAATGCAGCAATAATTGGAGACACAAAAATTGAAGAGAACTTATTACAAACATCGTCGGTGACGGCAACTGGAAGTTTAACAACTCAAAAGAAATTCGAAAAGATTCAATTGGAAAATgctaaaaaagcaaaaaaattcacagataattattattctagTTCCGAAGAAGATGAAGAGGatttaaatgaaacagaaaTTTTAGataaaatattcCAAAACTATTCTGGTGATATTAAACAATTGACTAAAACTCAAATATTTTTGGAGAATTTCTTTCAATCTGGTTCCGCAATATGCCTGATTTGTATTGGGAATATAAAGCGCACAGATTCAATTTGGTCTTGTATGTcgtgttattgtttttttcactTGAATTGTTTAAAAAGATGGGCGAATGATTCAATTGCACAACAAAAGCTGCGTATTACAGACGAACCATCCGGATACTATAATAATCAAGGCGAATTCATAactaaaaaacagaaaaatattcgTTGGTCTTGTCCAAAATGCAGAATTGATTATAATCCTGATGCTATACCCCGAAATTATGAATGTTTTTGTGGAAAAGAACTAAATCCAGTTTTTCATCCGTGGCAAATTCCGCATTCATGTGGAGAGCGTTGTGAAAAACTATTACAACCCGAATGTGGACATAAATGTTTACTTCTGTGTCATCCAGGCCCTTGTCCGCCTTGTCCACAAAACATTTCTAAAAGTTGTTGCTGtaaaaaatcatcggaaaaaacCATACGCTGTTTTCAAAAGGAATGGTTTTGTCAGAAAAGGTGCGGAAAGTTTTTATCTTGCGGTCTTCATCAATGTGAAAGTTTATGTCATTCAAAATGCTCGCCTTGTTCAAAAAAGAGGCAGCAAAAATGTTTATGTGGTCAGGATTCACGTGAACGAAATTGTGCTGAAATATTTTGGCAGTGTAACAAAATATGtgaaaaagaattgaattgTGGTTTGCACAAATGTAAGAAACTTTGTCACGCAGAAGATTGTGGTGAATGTCCATTAAGTTTGCCTCGAACTTGTCCATGtggaaaaaataaaattgtggCCCCTTGTAGTGAATTAATTGAGCCTTGTGGAGATACATGCCTTAAAACTTTAACTTGTGGAAAACATTATTGCCAACATCGATGTCACAAGGGTGAATGTAGTGcttGCACcgaaataattgttaaaaattgtcgCTGTGGTTTACACAGCAAAGAATTGccttgttcaaaaaattttagttgtGAAACTAAATGCAAATTAACAAAAGAATGTGGAAAACACCCATGTAATAAAAAGtgttgtGATGGTCAGTGTCCACCTTGTGATAAAATATGCGGCAAACTTTTGTCTTGTAAAAAACACAAATgtaaATCTATATGTCATGATGGACCATGCTATCCTTGCGAATTGAAATCTCTTGTAAAATGTCGTTGTGGTAATACGTCTATGGAAGTACCTTGCGGCAGAGAAAAAAGAGTAAAGCCTCCAAAATGTAATAAGCCCTGCAGAGTTTCTAGTAAATGTCATCATGAAAATCCGCATAAATGTCATTTCAATGATTGTCTTCCATGCTCTCAAAAATGTGGCTTAAAAAATGATGTAACGAATTGCAATCATCCATGTCAAGAGAAATGTCATAGCGCTGTTAAAATTTACTCAAAAAAGCAACAACCAGCAAATATTTGGGATGTCATTCCagaatttgaatttgtaaaattacCGCATCCTAAATGTGAGATCAAAGTTGaggCTACATGTATCGGAGGTCATGAAACATGTttaataccttgttggaactcCAAGCCAACAAGTTGTCAGAGAATTTGTGGCCGGATTTTAAAATGTGGCAATcattattgtgaaaaaatttgtCATACAGTAAAGGTTCTTCAAGACAAAAACGCACAAGAAACTTGCAATTCATGCCAGGAatcatgtcaaaaaaaaaggtccAACGgatgcatacaTCAGTGTAGGAAATCCTGCCATTTGCCGCCTTGTGAATCATGCAACATTTTCTTGAGAATGTCTTGTCATTGTGGCCTTACGCAAGTTTGTGTTAAATGTAGCGAATTCAATGCTCCAAATTTGGATGACAAGGAATTAAGAGCAATAAAAGAGAAATTACAAAGTTGTAAGGATCgatgtattaaaaatTATGCATGTGGACATCGCTGTAATTCAATTTGTCATTCGGGATCTTGTCCAAATccagaaaattgcaaaaaaaagataaaaattttttgtgattgcaaaaatttaaaaatggaaGTTTCTTGTGAGAAATATCGAAATGGTTTGACAAAATTACAATGTGATGACAAatgcgaaaataaaaaatcaatagagGCTCAGTCAAAATTCGAGCAAGAATCTAAACTACGTGCAGAGGAAAATGAACGTAATCGCACGGAAATTGAACAattcgaaaagaaaattttaggaaaaagaAAACACCGTGAGAGAAAAATTTGCACTTCAAAAACTGATAACAACAATAGAACTAAAGTATGCATGAAATTATTGGATTTGTTTCCATTACAATATCTAATTCAACAAACATATGGTAATTAA
- Protein Sequence
- MSESNNKSTHHWTRKNKKQTQKNAAIIGDTKIEENLLQTSSVTATGSLTTQKKFEKIQLENAKKAKKFTDNYYSSSEEDEEDLNETEILDKIFQNYSGDIKQLTKTQIFLENFFQSGSAICLICIGNIKRTDSIWSCMSCYCFFHLNCLKRWANDSIAQQKLRITDEPSGYYNNQGEFITKKQKNIRWSCPKCRIDYNPDAIPRNYECFCGKELNPVFHPWQIPHSCGERCEKLLQPECGHKCLLLCHPGPCPPCPQNISKSCCCKKSSEKTIRCFQKEWFCQKRCGKFLSCGLHQCESLCHSKCSPCSKKRQQKCLCGQDSRERNCAEIFWQCNKICEKELNCGLHKCKKLCHAEDCGECPLSLPRTCPCGKNKIVAPCSELIEPCGDTCLKTLTCGKHYCQHRCHKGECSACTEIIVKNCRCGLHSKELPCSKNFSCETKCKLTKECGKHPCNKKCCDGQCPPCDKICGKLLSCKKHKCKSICHDGPCYPCELKSLVKCRCGNTSMEVPCGREKRVKPPKCNKPCRVSSKCHHENPHKCHFNDCLPCSQKCGLKNDVTNCNHPCQEKCHSAVKIYSKKQQPANIWDVIPEFEFVKLPHPKCEIKVEATCIGGHETCLIPCWNSKPTSCQRICGRILKCGNHYCEKICHTVKVLQDKNAQETCNSCQESCQKKRSNGCIHQCRKSCHLPPCESCNIFLRMSCHCGLTQVCVKCSEFNAPNLDDKELRAIKEKLQSCKDRCIKNYACGHRCNSICHSGSCPNPENCKKKIKIFCDCKNLKMEVSCEKYRNGLTKLQCDDKCENKKSIEAQSKFEQESKLRAEENERNRTEIEQFEKKILGKRKHRERKICTSKTDNNNRTKVCMKLLDLFPLQYLIQQTYGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -