Hcul015591.1
Basic Information
- Insect
- Hybos culiciformis
- Gene Symbol
- Inpp5k
- Assembly
- GCA_964007475.1
- Location
- OZ023274.1:14293087-14319292[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.00046 0.033 15.2 2.3 1 23 9 31 9 31 0.98 2 20 0.002 0.14 13.2 1.6 1 23 37 59 37 59 0.95 3 20 0.0033 0.24 12.5 3.5 1 23 63 85 63 85 0.94 4 20 7.2e-07 5.2e-05 24.0 3.0 1 23 91 113 91 113 0.98 5 20 0.00011 0.0078 17.2 5.5 1 23 119 141 119 142 0.96 6 20 0.0064 0.46 11.6 2.3 1 19 151 169 151 173 0.94 7 20 0.0011 0.077 14.1 0.7 3 21 181 199 180 200 0.94 8 20 0.0027 0.19 12.8 5.4 1 23 219 241 219 241 0.98 9 20 0.0018 0.13 13.4 2.2 1 23 247 270 247 270 0.96 10 20 0.0059 0.43 11.7 2.9 1 23 292 314 292 314 0.97 11 20 0.00014 0.01 16.8 2.9 1 23 327 349 327 349 0.98 12 20 0.0028 0.2 12.7 2.2 1 23 355 378 355 378 0.92 13 20 9.7e-05 0.007 17.3 3.0 1 23 403 425 403 425 0.98 14 20 1e-07 7.5e-06 26.7 3.3 1 23 588 610 588 610 0.99 15 20 9e-05 0.0065 17.4 3.1 1 23 616 638 616 638 0.97 16 20 0.00017 0.012 16.6 0.6 1 23 644 667 644 667 0.97 17 20 0.055 4 8.7 4.7 1 23 673 696 673 696 0.96 18 20 6.7e-05 0.0048 17.8 2.0 1 23 702 724 702 724 0.97 19 20 1.7e-05 0.0012 19.8 2.9 1 23 728 750 728 750 0.98 20 20 0.19 14 7.0 3.3 1 23 756 779 756 779 0.96
Sequence Information
- Coding Sequence
- ATGATTCATATGGATCAAAAACGTTATAAATGTGAGTTTTGCCAGGAATCGTTTGTAcaaaaaaacagttttaataTTCATTACGAAAAacatgttgaaaataaaatttataattgtacATATTGTGATGAGAAATTTGCAATCGAAAGTAATTACAACAGGCATAAGCTTTTTCATTTGAAACCTTACAAATGTCAATATTGTGAAGCATCATTTAGTAAGAAATGTAATCTTAATGATCACGATCGTATTCATACTGGATATAAGCCGCATAAGTGCAATATTTGTGGTAAAAGATTCTCGCAACGGACAGCTCTAACAGGTCATCAACGTACTCATACTGGTGAAAAGCCTTACAAGTGTAAATATTGTAATCAATCGTTTGCTATTAAAAGGAATTTGAACAGACATACTTATACGCATCATGCGGACACCCTTGGAGAGGCACCATTTAAATGTTCGCACTgtgataagaaattttttgaacgTAATGCTCTTTTGAAACATGAACCAATCCATGTTGGTCTCAAGCGATGGTTATGCTCTAAATGCGGCaaaggatttaaaaattcaaataagttaaaaattcaCGAGAAACTTCCTTGTGctattgaaaggaaaattgaaaataaaactaaactgGAAACTATTTTACATTCATGTCCGTattgttgtaaaatatttaatcgtTCAAATCAACTTAAGGTTCATGAACGGACGCATACTAATGAAAGGCCATATTCCTGTCAGTATTGCTTGAAACGTTTCactcaaaaaattgttttacaaaaGCATGTTGAAAAAAAGCATCCCAATGGTCAAATTAGTCTAATGCAGAAATCCATGTCAAAGCAAACTTCCATGCAAAAACCATATCAATGTAgctgttgtgaaaaaaaatatgctaaaagCGAAAATCTGCAACGGCATGAACAAATACATTCAAATTTAAAGCCGGATTTAATGCAAACagaatattataattgtttatattgtgaaaaaaaatttaatcatgaAAGCCAACTAATTATACATGAACGAAAACATACAGGCGATAGACCTTTCTTATGCCGATTTTGTCCCAAAAAATTCACGCAGAAGACTGCTATGAAGAGACATGAGTACACCATCCATTCAGACAGAGAATATTCTGTAACTAATAAATTAGAGatacaaaaaattaagtatttgaaTGAATCAAAACCTTTTCAATGTCAATTTTGTAGCAGAAAATTTGGAAAGAAGGGAAATCTTCAAAAGCATCTAAACTCACACTCAGAGAGGAAAACTGAAAATCAATTTTCGTATTCGACCCAATTACCTCTAAAGATTGAAcctaatggaattaaaaaatcttatacaACTTTAGGAGACGCGAATAAAGAAAATTCAGAATTTCTTAATCAGTtagaaataaattctaataacgTTATCAAATCAACAGAATTCGATACGGTCTTAttaatttgtaatgaaaataacaatgatacgaaaaatgaaaaacagaGAACACCTCGTGAAGAAGAAAACCGCGAATCAAAGTATTCATTTGATGGTAATGAATTAATCTCATCCAACAACGAAATAAATACATTTGAACCTGTTCAAATGTACGACCACGATAATTTTTCTTCCAAAAGTCAAACAAATGTCATTGTAACAAAATCTGAAGTCTCAAACAAAGGAACAATAATGCTTagtactaaacaaaaaaaaaatcaagaggAAGTAAGACCGAGGTTTGCAAAAGGCGAAAAACCTTATAAATGCACGTACTGCCCAAAATGCTTTCGGCAAAGACCAAATCTGATCAAACATATCCGAGTTCATACAGGTGAGACTCCATTTCATTGCACTTATTGTGGCAAAGGTTTTAAGGAAAGTGGTACTTTGAAAACTCATGAGCGTCAACACACTGGAGAGAAACCATTCACATGTTCTGTTTGCCCAAAAGCATTTGCTCAACTTACATCTTTAAATTATCACGAAAAGCGTTCTCATTCACtggaaaaatcttatttttgtaAGTTCTGTAAAGAATTATTTTGCAATAAGAATGATTTGGAATTGCATATTACGAAAAAACACAGTGATGATAAACCTTATAAATGCGAAATATGCTCTAAATCATATTCACTGAAGCATAATTTAAGGCAACATGAGGCAGTTCATAGAAGAACTCATAAATGCACTTATTGTGGAAGAACTTTCAATAAGGAGGCGTTTTTAATCAAACACCTACGAATTCATACagAGCCAAGAAAATATCAGTGTAGTTATTGTGGTCAAGGATGTGCTTGTCTTTCCAGTTTAAAAGATCATGAAATGCGACAACACATTGGGAAAGcaatttttaaatgtcaattttgTTCAAATGCATACACGAATAGTTGCATTGCTCTCCTTAATGCAATTCCAACAGGGAATGAtccaaaaacaatttataatacaGTCGAGGGTTCTGATGATGCTGAAATAGTGCCAGAATTGATTGGAAAAAATACAGGATTAGCTTCAGAAGATGGTCCTGTAACCGTTGCCAGTCATAATTCGCATACATCAGCGACGTTTTTTGGAACTGGAATTAGTTTtagaaatggaaaaatattcttaaatggAAAAGaagttgatattgaaaaaaaaactgACTACATTCAATGTGATACTCTCAAATGTCCACCGGAAGCAATCAAGTGCGCCATTCGTCAAACAAAAAATCCTGAAAATTCGAATGAAACATTAACAACTCTTCGTTGTGGtgataaagataataaaattgttaaagaaGATAAACAAATCGATCCATTGCTTGAAGATCAAAAATGTCCAATGAATTCTTACATTGAAATGAGTTTCGGTGATCAATTTTTAACGACTAGCATTTTGGATCCGGAAATTGCAAAAGAAATAGAAGAAGCACAAGcgcatttcaataatttattcaaaggCATAAATGAGAGTTTCCGTAAGCTTTGGGATGATCCTATTTACGTCATTACTTGGAATGTTGGCTCCGAATATCCAACTAATTTGTCGCTTACAAATTTATTGGGGCTAGATAAAACTCCAAGTGCCGAAGAGTCTACGCCAGATATTTATGTAATTGGATTACAGGAAGTTAATTCTCAGCCCCAAAATCAAGTCTTGGGATTATTTTTAGCAGATCCATGGACGGGAGCTTTGAAGGACACGTTAAGATCAAGAGATTTTGTTGCTATTAAAACTGAACAAATGCAAGgtgcattaataattttatttgtaaaaaggaAACACTTACTGCATTTGAAAGAAATCGAATCGGAATTCACTAGAACTGGATTAGGCGGTATATGGGGTAACAAAGGTGCTGTCAGCATTCGAATGTCGTTATATGGCACAGGTATATCTTTTGTTAACTCACATTTGGCTGCGCATGATCACGAATTAGAAGAAAGAGTAAatgatttcaatcaaattttgagaAATCATCATTACCATGTAAAGAGATATCGAGAAATTTTTGATCACGActaCGTTTTTTGGTTCGGTGATTTGAATTTTCGACTACAATATGATGATGACACAACACCAGAAGAAGTACGAGATTTAATTAAGAAGGATCAATTGCCGGAATTAATTGAGCGTGATCAGTTAAGTTTAGTCAGACGTGAAGGAAAAGCATTTTTCCAAATGGAAGAGCGATTACCAGCCTTCCCTCCAACATTCAAATTCCACAAGGGTACTTCAAAATATGATATGAAgcGAAGACCAGCATGGACCGATAGAATCTTGTGGCGTGTTGACAAAGACAGTTATGTTAATGTTGAACTAGGGATTGAACAATTAGCTTACAAAAGTCATCCTGGCTATAATATAAGTGACCATAAGCCTGTAAcaagtgaatttaaaattaagGTATTTACAAGTCCTTTCGAAACAAATGTTGAATTTTCACACATTCCTATCTGGAATATTGGAGATGAAAATCTTATTGAATTCATCTTGCCTGATGGGTTTGAAGAAGAAACTGGTGATTGGATAGGAATTTATCATTATGATTATGCCTCACTATCAGATTATGTCGCCTATGAGTATACTAATCAAGCCGGTACCAAACGCACTGTTGTTGATCAAAATGAAAATCGGAAACAAATACGTATGGAATTTTCAGATTCAATAGATCTACAAGAGGATGTtgaatatttgttaatttatgtATCTAGTACTGGGATAAGAGGTGTTACAAGTATTTCTGGTATAAGTAATACATTTAAGGCAGAACGACGTCCACCGTCACCACGTTTTGAGGCTGTTGATTAA
- Protein Sequence
- MIHMDQKRYKCEFCQESFVQKNSFNIHYEKHVENKIYNCTYCDEKFAIESNYNRHKLFHLKPYKCQYCEASFSKKCNLNDHDRIHTGYKPHKCNICGKRFSQRTALTGHQRTHTGEKPYKCKYCNQSFAIKRNLNRHTYTHHADTLGEAPFKCSHCDKKFFERNALLKHEPIHVGLKRWLCSKCGKGFKNSNKLKIHEKLPCAIERKIENKTKLETILHSCPYCCKIFNRSNQLKVHERTHTNERPYSCQYCLKRFTQKIVLQKHVEKKHPNGQISLMQKSMSKQTSMQKPYQCSCCEKKYAKSENLQRHEQIHSNLKPDLMQTEYYNCLYCEKKFNHESQLIIHERKHTGDRPFLCRFCPKKFTQKTAMKRHEYTIHSDREYSVTNKLEIQKIKYLNESKPFQCQFCSRKFGKKGNLQKHLNSHSERKTENQFSYSTQLPLKIEPNGIKKSYTTLGDANKENSEFLNQLEINSNNVIKSTEFDTVLLICNENNNDTKNEKQRTPREEENRESKYSFDGNELISSNNEINTFEPVQMYDHDNFSSKSQTNVIVTKSEVSNKGTIMLSTKQKKNQEEVRPRFAKGEKPYKCTYCPKCFRQRPNLIKHIRVHTGETPFHCTYCGKGFKESGTLKTHERQHTGEKPFTCSVCPKAFAQLTSLNYHEKRSHSLEKSYFCKFCKELFCNKNDLELHITKKHSDDKPYKCEICSKSYSLKHNLRQHEAVHRRTHKCTYCGRTFNKEAFLIKHLRIHTEPRKYQCSYCGQGCACLSSLKDHEMRQHIGKAIFKCQFCSNAYTNSCIALLNAIPTGNDPKTIYNTVEGSDDAEIVPELIGKNTGLASEDGPVTVASHNSHTSATFFGTGISFRNGKIFLNGKEVDIEKKTDYIQCDTLKCPPEAIKCAIRQTKNPENSNETLTTLRCGDKDNKIVKEDKQIDPLLEDQKCPMNSYIEMSFGDQFLTTSILDPEIAKEIEEAQAHFNNLFKGINESFRKLWDDPIYVITWNVGSEYPTNLSLTNLLGLDKTPSAEESTPDIYVIGLQEVNSQPQNQVLGLFLADPWTGALKDTLRSRDFVAIKTEQMQGALIILFVKRKHLLHLKEIESEFTRTGLGGIWGNKGAVSIRMSLYGTGISFVNSHLAAHDHELEERVNDFNQILRNHHYHVKRYREIFDHDYVFWFGDLNFRLQYDDDTTPEEVRDLIKKDQLPELIERDQLSLVRREGKAFFQMEERLPAFPPTFKFHKGTSKYDMKRRPAWTDRILWRVDKDSYVNVELGIEQLAYKSHPGYNISDHKPVTSEFKIKVFTSPFETNVEFSHIPIWNIGDENLIEFILPDGFEEETGDWIGIYHYDYASLSDYVAYEYTNQAGTKRTVVDQNENRKQIRMEFSDSIDLQEDVEYLLIYVSSTGIRGVTSISGISNTFKAERRPPSPRFEAVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -