Hcul017436.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hybos culiciformis
Gene Symbol
-
Assembly
GCA_964007475.1
Location
OZ023274.1:44718128-44723023[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 2e-05 0.0015 19.5 1.6 1 23 221 243 221 243 0.98
2 37 0.0015 0.11 13.6 2.7 1 23 249 271 249 271 0.97
3 37 0.0003 0.022 15.8 5.3 1 23 277 299 277 299 0.98
4 37 3.3e-07 2.4e-05 25.1 1.6 1 23 305 327 305 327 0.98
5 37 7.2e-07 5.2e-05 24.0 2.1 1 23 333 355 333 355 0.98
6 37 1.3e-05 0.00095 20.1 3.4 1 23 361 383 361 383 0.99
7 37 7.2e-07 5.2e-05 24.0 0.6 1 23 389 411 389 411 0.99
8 37 2.6e-05 0.0019 19.1 0.6 1 23 417 441 417 441 0.98
9 37 3.8e-05 0.0027 18.6 5.9 1 23 447 469 447 469 0.97
10 37 7.2e-06 0.00052 20.9 1.3 1 23 475 497 475 497 0.99
11 37 6.8e-06 0.00049 21.0 5.0 1 23 503 525 503 525 0.97
12 37 1.8e-05 0.0013 19.6 1.4 1 23 531 553 531 553 0.98
13 37 0.0033 0.24 12.5 1.3 2 23 560 581 559 581 0.97
14 37 1.8e-05 0.0013 19.6 1.0 1 23 587 609 587 609 0.99
15 37 0.0021 0.15 13.2 1.4 1 23 615 638 615 638 0.94
16 37 2e-07 1.5e-05 25.8 3.6 1 23 644 666 644 666 0.98
17 37 0.00051 0.037 15.1 0.3 1 23 679 701 679 701 0.98
18 37 3e-06 0.00021 22.1 5.5 1 23 707 730 707 730 0.98
19 37 0.76 55 5.1 0.5 1 23 736 758 736 758 0.85
20 37 0.00049 0.036 15.1 0.5 2 23 765 786 764 786 0.97
21 37 0.0033 0.24 12.5 2.6 1 23 792 814 792 814 0.98
22 37 7.3e-07 5.3e-05 24.0 2.1 1 23 820 842 820 842 0.99
23 37 8.9e-06 0.00065 20.6 1.6 1 23 848 870 848 870 0.99
24 37 2.2e-05 0.0016 19.3 1.4 1 23 876 898 876 898 0.99
25 37 1.8e-06 0.00013 22.8 0.9 1 23 904 926 904 926 0.98
26 37 0.31 23 6.3 0.7 1 23 934 956 934 956 0.95
27 37 6.5e-06 0.00047 21.0 0.3 1 23 962 984 962 984 0.98
28 37 2e-05 0.0014 19.5 1.7 1 23 990 1012 990 1012 0.98
29 37 4.1e-07 3e-05 24.8 2.4 1 23 1018 1040 1018 1040 0.99
30 37 0.014 1 10.5 4.4 1 23 1046 1068 1046 1068 0.98
31 37 4.5e-06 0.00033 21.5 1.6 1 23 1074 1096 1074 1096 0.98
32 37 9.3e-06 0.00067 20.5 0.2 1 23 1102 1124 1102 1124 0.98
33 37 0.0097 0.7 11.0 4.6 1 23 1130 1152 1130 1152 0.98
34 37 3.9e-06 0.00028 21.7 0.3 1 23 1158 1180 1158 1180 0.98
35 37 1.4e-06 0.0001 23.1 2.5 1 23 1186 1208 1186 1208 0.97
36 37 0.005 0.36 11.9 1.0 1 23 1214 1236 1214 1236 0.96
37 37 1.4e-05 0.001 20.0 1.8 1 19 1242 1260 1242 1263 0.94

Sequence Information

Coding Sequence
ATGGAACAAGAATCTAGAAGTGCATCAGATGCTGGCGATTATGATATTTGCGAAACAGATCTTATTGTTGACGCATCCGATTTGATGTTTGAAAACGAAACTGAAAATATTGATATGAATTCTTTAAACCATCATGAAAATATATCAACTGTAAAAACTGAAAGAGAAAGTCTGACACAACAATTAAtacctaataataattatttaaatgaaccAGAATTACTTAgtcaattaaatataattaaagttatGGAAGTAATTCCTGAAAGTACGGAAATATCatcaaatttaaagaaatcttTACCAAATCtaaatgtacaaataaaaatggaaaaaattgtcgaacaaaagaaaacaaatatttctgaagaagaaataagtaaaatattaaataatttatcaacaGAAGATGATGAATTTATTCGACAAATTCTTTTTAATCAGCCAATTGTCAAAATTAGGAAACTTCGCtcaaatgttataaaaatggtGGTAGCCAAAAAATCTGCATCAAAGTTTTCAGCTAAACAACgaatcaaaaaaaagtttttcgatAAGAGCTTAGCTCATTCTATTTTCGATGATCTCCTTTCGGATGAGGACTCACAGGATGCAACCTACACCGGAAAAGGTCATTTCGATAATAATACTAGAAAACGTTTCAAATGTAAATACtgtaataaactttttaaacaaaaagcTACTTTGGTTGTTCATGAAAGAATTCATACGGGAGAAAATCCATACAAATGTGACATATGCTTTATGAAATTTCGTTCGAAATATTCATTAGATCAGCACACATTCATTCATTCCGAGGAAAAACcacataaatgtaaatattgcgAAAAAACATTCACCCAAAAATACTCAAGAATAAATCACGAAAGAATACATACGGGAGAAATGCCTTACACATGTGATATCTGTGATAAGAGCTTTAGAACGAAACAGAATTTGTATCAGCATCAATTAATACATTCCAGTGATAAGCCTTTTCGTTGCTTATACTGTAATAAAGCATTcaagcaaaaatataatttaattatacatcAACGTCTACATACTGGAGAACATCCATTCAAGTGTGTTTACTGTGACAAATCATTTCGGGCAAAAGTGAATTTACAGCATCATACTCTAACCCATACTGGTGAAAAACCATATCAGTGTGGTTATTGTAATAAAGCATTCAAACAACGTGTTAATTTAAACATACATGAGCGTATCCACACTGGCGAAAAGCCATACGAATGTGAATTTAATGATTGTGATAAGTCTTTTGTATCGAAAACCAGCTTGGATCAGCATTTACTGACCCACAGTGGATTGAAACCTCATAGATGTGAATTGTGCCATAAATCTTTCAAGCAAAGGTATAATTTAACAATTCACGAACGTCTTCACACTGGTGAGAAACCGTATAAATGTTTAATGTGTGATAAATCATTTCGTGCGAAACAGAATTTACAACAACATGTATTAACTCATACAGATGTAAAACCACATCATTGCGAAGTGTGCGGTAAATCATTTAAACAACGTTTCAATTTAACAATTCATGAGCGCACACATACTGGGGAAAAACCTTATAGTTGTGATGTTTGTAAAAAAGcgtttatttcaaaatctttattATATCAACATAAAAATACACATCAGGATAAAAAACCGATTAAATGCAGATTTTGCTTCAAAGTTTTCAAACAACGTGTCAGTGTAAAAGTTCATGAACGTATACACACAGGAGAAAAAccatataaatgtaaatattgtgACAAAGCATTCACCCAAGGAAATTATTTGTCAGTTCATGAACGTATTCATACTGGTGAAAAACCATTTAGTTGcgaattatgtgaaaaaaaattcatttcaaaaacaAGTTTGTACATTCACAGTAGGTTTGTTCATTCAGATGAGAAATTACATCAATGTGATGAATGCTTTAAGTCATTTAAACAAAAGGGCAATCTGATACAGCATATGCGAACTCATTCCAAGGAAAATCCAAGGAAAAAAggaggAAATCCATTTAAATGTGATATTTGTGGTAAAAGAATTAATTCAAAAGCGAGTTTAGATCAGCATAAGCTCATCCACTCAGGAGAAAGACCATTCAAATGCGACAATTGTGATAAATGTTTTAGAACGAAAACGAATCTTAATCAGCACAAAAATACTGTTCATCAAAATAGAACGTCATTTGATTGCGAAATTTGTGGAAAAGTTTTGCTTTCAAGAGGAAGTTATTACCAGCATAAGTACCTTCACTCAGATAGAAAGCCTTTGAAGTGCAAATTTTGTTACAaagtctTCAATATAAAAGCCAATTTAATTATTCATGAACGCATTCACACTGGAGAAAAACCATACAAATGTGAATTATGCCATAAAGCGTTTCGTATTAAAATTGGTTTGGCTCATCATTCATTAACCCATACTGGAGAAAAACCATATAAATGTCACTATTGTGATAAAGGTTTCAAACAAAAAGTCAATTTGGTAGTTCATGAACGAATTCACACTGGAGTTAAACCGTATAAATGTGATACATgcgaaaaaaatttcgtatccAAAACAAGTTTAAATCAACATTTACTTACTCATACGCGAACAAAGCCGTTTAAGTgcgaaatatgtaaaaaatcatttaataaaaaactttcattaATTGGTCATCAAAGAATTCACACTGGTGAAAAACCATTTAAATGCAATGAATGTGAAAAAACATTCGGGTCTAATGCAAATCTGAAGCAACATCTGCTTAGCCACAATCCGAATCTACCACAACCATTTGAATGTGATGTTTgtggtaaaattttattgtcaCGAGGTAGTTTTTATCAGCACAAATATACACATTCTGAGCATAAACCTTATAAATGTAATGGCTGTGAtaaggttttcaaaataaaagcaAACTTACTTGTTCACGAAAAAATACATACTGGCGAAAAACCTTTTATGTGTGATATTTGTCATAAAACTTTCAGAGTAAAAAATGGTTTAATTCAGCATTTATTGACTCATACAGATGAAAGGCCTTACAAATGTCAACACTGTGATAAATCGTTCAAACAAAAGGTGAATTTAGCAGTACACGAACGCATTCATACTGGAGTTAAGCCTTACAAATGTGAAtgttgtgaaaaattatttacatcgAAATCTAGTCTAAATCAGCATAATTTGACACATTCTAGAGAAAAACCACATAAATGTGAAACCTGTGGAAAAACTTTCAATAATAGAGTTTCCTTAATAGGTCATCAGAGGATACATACTGGTGAAAAACCATTCAAATGTGAACTATGTGAAAAGGCATTCGGGTCTAATGCAAATCTGAAGCAACATCAAATTATTCATTCTGATGACAGACCATTTGTTTGCAAATTTTGTAGCAGatcttttaaacataaattgcCGTTTGAAAGTCATGAGCGTACACATACTGGCGAAAAACCTTATAAATGTGATTTGTGTGATAAAGCGTTTAATCAACGGTCTTCATTAGCTGCCCATGAAAAACTTCATACTGGTGAGAAGCCTCATAAATGCGAAGACTGTGGTAAAGCTTTTCGCACTAAAGCCAATTTAAATCAACATTCGTATACACATTCAGGCTTGAAACCTTTTTCTTGTGATATTTGTCAGAAAAAATTTGTGGCCAAAGCAACAATGGAACATCATAAAGCTGTCCATTCTGATGAAAAACCTTTTAAATGTTCCTATTGCAATAAagcatttaaacaaaaaagtaatttatcaATGCACAATAAAGAGTGTGTAGTTATGactaatgtttaa
Protein Sequence
MEQESRSASDAGDYDICETDLIVDASDLMFENETENIDMNSLNHHENISTVKTERESLTQQLIPNNNYLNEPELLSQLNIIKVMEVIPESTEISSNLKKSLPNLNVQIKMEKIVEQKKTNISEEEISKILNNLSTEDDEFIRQILFNQPIVKIRKLRSNVIKMVVAKKSASKFSAKQRIKKKFFDKSLAHSIFDDLLSDEDSQDATYTGKGHFDNNTRKRFKCKYCNKLFKQKATLVVHERIHTGENPYKCDICFMKFRSKYSLDQHTFIHSEEKPHKCKYCEKTFTQKYSRINHERIHTGEMPYTCDICDKSFRTKQNLYQHQLIHSSDKPFRCLYCNKAFKQKYNLIIHQRLHTGEHPFKCVYCDKSFRAKVNLQHHTLTHTGEKPYQCGYCNKAFKQRVNLNIHERIHTGEKPYECEFNDCDKSFVSKTSLDQHLLTHSGLKPHRCELCHKSFKQRYNLTIHERLHTGEKPYKCLMCDKSFRAKQNLQQHVLTHTDVKPHHCEVCGKSFKQRFNLTIHERTHTGEKPYSCDVCKKAFISKSLLYQHKNTHQDKKPIKCRFCFKVFKQRVSVKVHERIHTGEKPYKCKYCDKAFTQGNYLSVHERIHTGEKPFSCELCEKKFISKTSLYIHSRFVHSDEKLHQCDECFKSFKQKGNLIQHMRTHSKENPRKKGGNPFKCDICGKRINSKASLDQHKLIHSGERPFKCDNCDKCFRTKTNLNQHKNTVHQNRTSFDCEICGKVLLSRGSYYQHKYLHSDRKPLKCKFCYKVFNIKANLIIHERIHTGEKPYKCELCHKAFRIKIGLAHHSLTHTGEKPYKCHYCDKGFKQKVNLVVHERIHTGVKPYKCDTCEKNFVSKTSLNQHLLTHTRTKPFKCEICKKSFNKKLSLIGHQRIHTGEKPFKCNECEKTFGSNANLKQHLLSHNPNLPQPFECDVCGKILLSRGSFYQHKYTHSEHKPYKCNGCDKVFKIKANLLVHEKIHTGEKPFMCDICHKTFRVKNGLIQHLLTHTDERPYKCQHCDKSFKQKVNLAVHERIHTGVKPYKCECCEKLFTSKSSLNQHNLTHSREKPHKCETCGKTFNNRVSLIGHQRIHTGEKPFKCELCEKAFGSNANLKQHQIIHSDDRPFVCKFCSRSFKHKLPFESHERTHTGEKPYKCDLCDKAFNQRSSLAAHEKLHTGEKPHKCEDCGKAFRTKANLNQHSYTHSGLKPFSCDICQKKFVAKATMEHHKAVHSDEKPFKCSYCNKAFKQKSNLSMHNKECVVMTNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-