Hcul014480.2
Basic Information
- Insect
- Hybos culiciformis
- Gene Symbol
- -
- Assembly
- GCA_964007475.1
- Location
- OZ023273.1:149618877-149622330[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 2.3 1.1e+03 0.2 0.0 23 44 116 141 116 141 0.76 2 8 0.0057 2.9 8.6 2.5 4 38 133 162 130 166 0.79 3 8 0.00083 0.42 11.3 1.4 12 44 170 199 157 199 0.79 4 8 0.076 38 5.0 3.3 6 36 193 220 193 227 0.80 5 8 0.084 42 4.8 2.1 10 38 224 249 219 254 0.81 6 8 0.0065 3.3 8.4 1.2 9 39 252 277 245 280 0.77 7 8 4.5e-05 0.022 15.3 2.4 13 40 282 306 275 311 0.85 8 8 0.79 3.9e+02 1.7 4.4 18 43 316 338 307 339 0.78
Sequence Information
- Coding Sequence
- ATGCCTTCACTTGAGTGGACAAATTGGTGCCGATTATGTGGTGTTGATGGAGGCAcaacaaatgaaattaaattaaatttattgaaaattatggaAACATTTTTCAAAGTTGAGCTATCCATCCTAGActataaaatttgtgaaaattgcCTTGATTTCATGGATTCAATTTTTAAGTATTCAAAAAAAGTTGAAAggatacaaaaaatgttttcagaaTTAGAAACGAATGCAAACtacaatgttaaaattaatttggagGAAGTTCAAGAAAAATacaacatttttgaaaataaagttgaaTCGAGAATGAAACCAATTTTCGATTCACAACATAataatacacataaaaattataaaagaatagACGaaaaattttccagtTACGAAGAATTAAAAGCTCACATGGAATTAAATCATTCGCGCAATGCAGCCTGTAAATTATGCgGAAAAGTGCTTAAATCGATAAGTCATTTGAAAGCTCATGAACAAACACACATTCCATTGAAAGATAGAGAACTATATGGTTGTAATCTCTGTGGAAAAAAATTCACTACACCTTCAACATTGAGATATCATATTAGAGATATTCATCAAGATGAAAAGGAATTTATATGTGAAAATTGTGGAAAAGGATATTCAAACAAAaCAAATTTTGATTTGCACATTGCAACTCACAAAGAAGATTCTTACAAATGTGAAGTTTGTCAAAAAGGATTCAAATATAAACATGCATTGAaaagACACAGGAACGTTCATTCTGAGGAAAAATATCCTTGTAAAATATGTAATGCTGTTCTCAAGAATTCTCTAACACTTCAAAGGCATATGgtagtacattcaagtgaaaaaaaatttgaatgtaatTTTTGTGGTAAATTATTTTACCGGAGTAAAAATCTGAAGTCACATATGATGATAATTCATACTAGTTTAAAACCATATCAATGTACATTTTGCTCGGAGTCTTATTCAAGTAAATCGAATTGTACGAAACATGAAAGAACATCTCATCCAATTGAATTTGCTGAATTACAAGCTAAAGGCTTACCACAACAAGTAATATCTATACCCACTTTGAAACAATTGGAGGCAATGATTcagaaaaatgaaaacttaaaagTTTCACATATAACAACGAAAACGTAA
- Protein Sequence
- MPSLEWTNWCRLCGVDGGTTNEIKLNLLKIMETFFKVELSILDYKICENCLDFMDSIFKYSKKVERIQKMFSELETNANYNVKINLEEVQEKYNIFENKVESRMKPIFDSQHNNTHKNYKRIDEKFSSYEELKAHMELNHSRNAACKLCGKVLKSISHLKAHEQTHIPLKDRELYGCNLCGKKFTTPSTLRYHIRDIHQDEKEFICENCGKGYSNKTNFDLHIATHKEDSYKCEVCQKGFKYKHALKRHRNVHSEEKYPCKICNAVLKNSLTLQRHMVVHSSEKKFECNFCGKLFYRSKNLKSHMMIIHTSLKPYQCTFCSESYSSKSNCTKHERTSHPIEFAELQAKGLPQQVISIPTLKQLEAMIQKNENLKVSHITTKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00813086;
- 90% Identity
- iTF_00813086;
- 80% Identity
- iTF_00813086;