Hcul015600.1
Basic Information
- Insect
- Hybos culiciformis
- Gene Symbol
- bab1
- Assembly
- GCA_964007475.1
- Location
- OZ023274.1:14385660-14392894[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-17 1.9e-14 53.6 0.0 1 43 51 94 51 96 0.95 2 2 0.4 2.8e+02 1.9 0.3 2 15 188 201 187 214 0.86
Sequence Information
- Coding Sequence
- ATGGAAAACTCTCACGCATGGTTAGGAACATCAGCAATTGCAGATACCTATCAATATCAATTGCAATCAATGTGGCAAAAATGTtggaatcaaaatcaaaatttaatgcaTCATCTCAGATTTCGTGAAAGAGGTCCATTGAAGTCATGGCGACCCGAAACAATGGCTGAGGCAATATTTAGTGTCCTCAAAGAAGGATTATCATTATCACAAGCGGCACGTAAATATGATATTCCATATCCAACATTTGTTTTATACGCAAATAGGGTTCATAATATGTTGGGTCCGTCCATTGATGGTGGTTCCGATTTAAGACCAAAAGGCCGTGGTCGACCACAACGCATACTTTTGGGAATTTGGCCTGATGAGCATATTAAAGGTGTTATCAAAACTGTGGTATTTCGAGATATGAAAGAATTAAAAGATGACGCTGGACTACTCCATATGCAATATGGTCGAaattcgCCAGTTTTTCCATTTCAAGACAGCCCATTAGGATATCCATGTACAAACGGATTAACAAGTTCTCAACCAGGAAGTAGTGGCAGTGATTCTATGAGTCCGGAGGCGACCGCAGCAGCAGTTGCAGCTGTTGCACACGGATTACGTCAACAAATGCAAATGGCTGCGGCTGGACATCATTCAGATCCAACAAATATATTTCTACCAAGTCATATTCAGGGCCTAAATAATGTACCTAAACAAACACCATTGAgtgtaacaaatttaaataataacaatgaaaGGTCAGCAAATGCAAATTCAATTACGCAAAGACTACCACATCAGTTGCTTCCAAATTCAACGACTCTAAATTTATCCGGATTGCAAATAATTCCAGGTTTAGGTAGTTCAACTAGCTGCTCAAAAAATTCTATTCAGGGTCATTCAATATCACCCTTGCCTCATGATTTGCGTATTCAAAGTCCAGATGTTAGTCCATTGAATTCACCACTGGAAATGACATTAGAATCAACAAGCAATTTGACAGCATTTAAACCAACGGAAAATGTTTTCCATGATGATCTGTCGGAGTTAGTTGCCAGTGAGATTGTTCAACGTAACAATTGTAATACTACCGGTTGTAAAACACCATCaccaaataatattaaaattgaaccaATGACTGAATGTCGAAATGAATAG
- Protein Sequence
- MENSHAWLGTSAIADTYQYQLQSMWQKCWNQNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGSDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDMKELKDDAGLLHMQYGRNSPVFPFQDSPLGYPCTNGLTSSQPGSSGSDSMSPEATAAAVAAVAHGLRQQMQMAAAGHHSDPTNIFLPSHIQGLNNVPKQTPLSVTNLNNNNERSANANSITQRLPHQLLPNSTTLNLSGLQIIPGLGSSTSCSKNSIQGHSISPLPHDLRIQSPDVSPLNSPLEMTLESTSNLTAFKPTENVFHDDLSELVASEIVQRNNCNTTGCKTPSPNNIKIEPMTECRNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -