Hcul005959.2
Basic Information
- Insect
- Hybos culiciformis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_964007475.1
- Location
- OZ023273.1:30321360-30336016[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-15 4.1e-12 46.2 0.1 1 44 327 371 327 372 0.92 2 2 3.8e-18 2.6e-15 56.4 0.0 1 43 768 811 768 813 0.95
Sequence Information
- Coding Sequence
- ATGGTactaaaaaatgaaagaaacgCTTCATGTGgtCTAGAAAGGGTTGCTGAAGAGTTGATGGGACGCaggaaatggaaaattttacaaGAAGTTTTCTCCAGATCGCAAATAAACATAAGTCAAGAACAgacaaatatagaaaaattagagCCATCAATTGTGGAAAATTATTCGAAAtcaataaaagaagaaaatcaatCAATAAATTGTTCAACAAAGGACAataatcaaattgaaaataaagaagaattcaaagaaagaaaattaactaAAGAAGaATATTCAAGCGCAGATAATCATATTGAAAATCCAAAAACCACCACCAAAGAAGAAATACAAAACTCAACTTTGACAAATAATCCAGTTGATTGGAAACCAGCTGATCGGTGTTACTTTTGTGTTGACGGAAAGCTTCTCACGGTGAACGAAAAAGGAGAAATTGTGGCTGAGTCCGGCCCGGCATTGTCCGAGGCAGAGCTCGCCAATAAGTCAGCGAATGATTCTGATAGCGATTCCAGAAACAGTACACCTGATATAATACCTTCTAATCAATCATTCTTAAATGTTAAGAAATTAGTGACATCACATCAAATAGATTCACAAATTCCACCGAATATGACATCTTTTGAATCAGTGGCTGTACGATTAGCAGCAATTCAAGGATTACAATCACCTTTAGGTCAACTTTAtccaaATTTATGGTATCAACAAATAGCTCAACAATTACCTACACTCCCACCTACCTCAGAGCAGTTAGCTGCTGCATCAAGTCCTTCAAATAAAGATTCCCCAAGCCCAAATGAAACTGGTAATGTTGTTTCAAATTTAGTTGTTGGCAGTGTTACTGGTACCGGTGAACAGCCGTTAGACTTAAGTTCGAAACCGTCGCCCAGTTCATCAGTTAGTGGGGATTCGAAGCAGGCATTTaaaGTTAAACCTCGAATCAATACAACGATTCCTGGTAGACGAACTTATACCGAGGAAGAGCTTCAAAGCGCTCTTCATGATATTATGAGCGGTAAGTTGGGTACACGCCGTGCTGCAGTACAATATGGTATACCACGATCAACACttcgtaataaaatatataaaattgcttTGGAACAAAAGCGTGACACATCTACATCATTAAATCCAGCTGCATTGGATGCCCTAGACGCAGATGATGATGACAAAGATATATCTGATGAGGATGAACGAGACCTAAAGTTGGCAGACAATAGTGCTTTAATTACTACTCAACCAGAGGACATTTCTACATCGCATCTATTACAAACATTGCGTAAACCTAAAACTGCTGATTTGAAGCCATCAGCAGCAGAAAAtcaaacaaaacataaaacattacCAACAACTCCGACCCAACAACCACAATCACAGACGCCACCAATTGCACCAAATCGTTGGCTTGATTCCAATGTCCTTTTGCaaagtttattatttcaaaGCAGTTTAGGCGCTTTAGTGCAGCCGCACGTTCAGCAACAACCACAGCAATCTCCGTTGATGGATGATCCTGTTGTCCTTAGAGAAATTCTCTCACGTTTATTAATTCAGCAAGAGGAAATTATAAAAGAACAACAGCTTAAAAGCTCAAGTTCTGCTAGCACAGCAACAACAAGTGACTCTAATCGGGGAGATCATTTGAACAATggcaaacaaaatatattaactGACACCACCTCGTCAGTACAACAAACACATGCACATCAACAGCAATTACTTCAGCATCTTCAAAGCGGACAACGCTTATCAAAATCCGAAACTCCCGAAACTGCCTCATCGGCTGATTACAGTGAAAATAATGAAGAAGTAATACTTCGAATTCCGTCCTTTAAACCGGTAACTCCAACTAATAAAAACGGTGACGGTTCTCTATCCCCTACGCCTTCTACTAGTGGTCCAGTTTTACCAAAAAGTCCACAAAACAGTATGATGCCAGGTGGAATAACGTCACCTCCACCTTTACGACAAAGCAGTGAGTCGCAATCACCTCCCTTGTTTTCTTTGAGAGATGTAATTGCAAATAGTATAAGCAGAACATTTGGCCAACAAAAGGATCAAAATTTGCCAGGTAAACATCATTACGATGCAATGAATAACTCAAGCAGTAAGCGGGGCAATATATCAGTTATTAAAAGCATAGGTGGAACTGATCTTTCACACTTTGCTGCACaaccaaatttattaaatagttttcatcatcatcaccacCATTCCAGTGCAGCTGCTGCTGCCGCTGCTGCTGCTGCAGCGGGGAAAGGTACACGACCAAAACGAGGTAAATATCGCAACTATGATCGCGATAGTTTAGTAGAAGCCGTTAAGGCCGTGCAACGTGGTGAAATGTCAGTTCACAGAGCTGGTAGCTATTATGGCGTTCCACATTCCACTTTAGAGTATAAGGTTAAAGAGAGGCATTTAATGAGACCCAGAAAAAGAGAACCGAAACCCCAACCAATAGAGGGTGGCGGTAGTAATACAACTAATAGTACATCACTTAATCAGAAGCATTCCAATTTGTCAAATATATCGGCTGTAAATAGTTTAgataaacttaaaattcaaCAGCAACAACACAAGGCTGGAACATCGTCCTTGAAAAATAGTCCGCCCTTTCCCAGTACATCACCAAATGGTATGAAGATGCCCGGAATATTCGATCCTGCAATGACTGCTGCCCAACTGCAATATGCACCTCATCTTTTTTGGCCACATGGTTTTAATACATTACCACTTGACTTTCAAAGACAAGCTCTGGCGGCTGCTACTGGAAGTAGTTCCGCTACTACAAATTCTGGAAGTGGTACACCTGCCGAAAACTTTATTACATCACAAATGATACAAAGATTTCAAGAAGAATCGAATCGTTTTAATTCTTCTGCAAATCAACAAACTAAATCAAATACTACTGAGCTTTCACCTTCAAACATCACCACTAATGTAATTAATAAGACCAGTGTTGTACCTAATAAAAGTGCTCGTGAATTAGCTGAAAGTTTATACGATGGCGGCGAAGCAAATGGTTCGTCGTTTTTGGATGGAATTATTAGGCAAACATTAGATCGAAAAAACTCAAGTGACTTGCAACCGCCTCCGCCACACGGAACTTTATTAGATCATTTGGTTAAAAATCAACCAGTAAGCAAATTAACTAACAGTAATTCAAATGactcaattaattttaacaaaagatCAGCTAGCCCAACTAACAATTATCCAGTAATAAAACGAGAACGATCTAGTTCACCAGCAACATTAGTACCATCATCACCAAAAAAGAGCAATAGCAGCGaattaacaacaacaatttATCATAACTCAATTGATAGTAATATCGGATGCGGCAGTAGTAATGTAGATCAGCATTCTGAAGTAGAACAaatagaattaagaaaaaataaaatttcaataaaactagaaaatgaacAAGAACAACACCATTCTACATTACATCAAAGATTAGTATCTCCAACAAATCAATCATCTCAAAAAATTGGTGATATAATAAACTGCAATAACGCTGCTGCTGGGGGTAGTAATAATAGTAGTAACATTAATAGTAATAGTATTCTTCatgaaaaattaggaaaaataaaatctgaaaatcATGAagataatttatag
- Protein Sequence
- MVLKNERNASCGLERVAEELMGRRKWKILQEVFSRSQINISQEQTNIEKLEPSIVENYSKSIKEENQSINCSTKDNNQIENKEEFKERKLTKEEYSSADNHIENPKTTTKEEIQNSTLTNNPVDWKPADRCYFCVDGKLLTVNEKGEIVAESGPALSEAELANKSANDSDSDSRNSTPDIIPSNQSFLNVKKLVTSHQIDSQIPPNMTSFESVAVRLAAIQGLQSPLGQLYPNLWYQQIAQQLPTLPPTSEQLAAASSPSNKDSPSPNETGNVVSNLVVGSVTGTGEQPLDLSSKPSPSSSVSGDSKQAFKVKPRINTTIPGRRTYTEEELQSALHDIMSGKLGTRRAAVQYGIPRSTLRNKIYKIALEQKRDTSTSLNPAALDALDADDDDKDISDEDERDLKLADNSALITTQPEDISTSHLLQTLRKPKTADLKPSAAENQTKHKTLPTTPTQQPQSQTPPIAPNRWLDSNVLLQSLLFQSSLGALVQPHVQQQPQQSPLMDDPVVLREILSRLLIQQEEIIKEQQLKSSSSASTATTSDSNRGDHLNNGKQNILTDTTSSVQQTHAHQQQLLQHLQSGQRLSKSETPETASSADYSENNEEVILRIPSFKPVTPTNKNGDGSLSPTPSTSGPVLPKSPQNSMMPGGITSPPPLRQSSESQSPPLFSLRDVIANSISRTFGQQKDQNLPGKHHYDAMNNSSSKRGNISVIKSIGGTDLSHFAAQPNLLNSFHHHHHHSSAAAAAAAAAAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPIEGGGSNTTNSTSLNQKHSNLSNISAVNSLDKLKIQQQQHKAGTSSLKNSPPFPSTSPNGMKMPGIFDPAMTAAQLQYAPHLFWPHGFNTLPLDFQRQALAAATGSSSATTNSGSGTPAENFITSQMIQRFQEESNRFNSSANQQTKSNTTELSPSNITTNVINKTSVVPNKSARELAESLYDGGEANGSSFLDGIIRQTLDRKNSSDLQPPPPHGTLLDHLVKNQPVSKLTNSNSNDSINFNKRSASPTNNYPVIKRERSSSPATLVPSSPKKSNSSELTTTIYHNSIDSNIGCGSSNVDQHSEVEQIELRKNKISIKLENEQEQHHSTLHQRLVSPTNQSSQKIGDIINCNNAAAGGSNNSSNINSNSILHEKLGKIKSENHEDNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -