Basic Information

Insect: Hybos culiciformis
Gene Symbol: -
Assembly: GCA_964007475.1
Location: OZ023274.1:80035689-80044260[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.6e-10 1.1e-07 32.0 0.0 1 38 525 563 525 568 0.90

2 4 1.7e-13 1.2e-10 41.5 0.1 2 39 580 617 579 620 0.94

3 4 7.6e-17 5.3e-14 52.2 0.0 1 45 634 679 634 679 0.98

4 4 1.6e-16 1.1e-13 51.2 0.0 1 41 686 727 686 729 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.6e-10	1.1e-07	32.0	0.0	1	38	525	563	525	568	0.90
2	4	1.7e-13	1.2e-10	41.5	0.1	2	39	580	617	579	620	0.94
3	4	7.6e-17	5.3e-14	52.2	0.0	1	45	634	679	634	679	0.98
4	4	1.6e-16	1.1e-13	51.2	0.0	1	41	686	727	686	729	0.96

Sequence Information

Coding Sequence: ATGTTCAAATGCTGTGAATTGCAAGTTCAACAAAGATCCAGTGAAGGACGAGCAAAAAATTCAGGATTATTACGAACAGctgaacaattaaaaattaagggaTTATGTGATACAGCTGAAACAACAGATGAAATTTTAGCTACTGCAGATGCAACAATAACTGTATCTCCGGATTCTCTTATTTCAACACAACAAATAATTACAAATCAATTAACTAATCAAATATCAAATCAATTGTCGAATCAACAAATCAACAATACTATAATTTCAACGTGCGGGACAACAAATACAACAACTTCAACAACTACACCTCATCAAAGAAAATCTCGCGTTAGAAAACGATCAAAATCACCAGCTCCAGAtaattcacaacaacaacaacaatccATTGCGGCTGCTTTAGTTGCAGCTTCCAGTCACTCATTTACAACAGCAAATAGTGATTCAATAGTGAACATAAATCCAGCTACAGGTGCTATAACATCTGTTTCGAATGGTGCTAATATTATTGCAGTAAGTTCTCAGGCAACCGGTTCTACTGAAACGAATACCGTTACAGTTGCACATGGTTCTGGAAATATTCAATCACAACAACAAACTAAGCATTTAATAGTTGTCAGTGATTCCTCGTCATCATCACATCAAGGCAATATTGTTGGACACAAACCAGCGAAATTAGCAAAAACTGAATCACAAACACAGAATGGAAATACAACTGTTAGTCAATCAGGGCCAACAGCAATTGTAACACAAATTGTAGTAGCACGTGAACGCAGTGCAACAGCGGTTGCAAGTAATCAAACAACTGAAAATAAAGAAGGAAAAATGGCTCTAGGAATGGGAATGaATGGTGGACTATTAGGAATGCCAATGGGGTATTTAGACTTTGCACCTGAACCACCGGCACCGTCAGCAACACCTGTCACCGAACACGTGGACATAAATTGTACTAATGACACAAGAGATATATCAAATCCCTCCGAAACTCTTGATATAGACAATCATTTAGCCCAACAAATACATATACAACGTATAGATCAAACACCTATACAACATCAAATTCATCATGCGCAACAACATCAGCACCAACATCAACACCAACAACaccaccaacaacaacaacaacaacatcaacagCAACACCAACAATCTCAAAACAATTCTTCGAGTTCTTCTGTTGatacaacaaatttaattcaaaatataaaaattGAGGCATCATGTCATTCTAGTGACATTCAGCAACATCAAATTTCTCAAAATCATCCCCACCAAATACAACAACAGCAAGGACAATCAAATCAACATCAAATCATAACAAATGCTACGGTTATGGAAATAGACCCAGAAAATATTAAACATGAGCCTGGAATGATAATAACACCAGAAATAGTTACAATGATGACAACTGGACACATGGacatATATAATTCGGATACCAGTGAGGATTCCCTGATGATAGCCAATGGATCTCCCAATGACAACCAGCAGCAACACTTGAGCCAGGAGCCACATTATACGAATTTGGATTCACAGCACGATAATAGTAAGTTAAATGGACCGAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCACAATATGAGCTTGACGAAGGCATCAGTCCAATATGGGATACCATCAACAACTCTGTGGCAACGGGCACATCGCATGGGCATTGAAACACCGAAAAAAGAGGGTTCCACAAAATCTTGGAATGAAGACGCTCTTAACAATGCTCTTGAAGCTTTACGAACTGGTCAAATATCAGCGAATAAAGCTTCAAAAGCATACGGTATACCATCATCAACGCTTTACAAGATAGCAAGACGTGAAGGAATTCGACTAGCAGCACCATTCAACGCAGCTCCTACAACGTGGACACCGGAAGATCTAGAAAGAGCATTAGAAGCGATTCGTGCAGGACATACGTCTGTTCAAAAAGCTAGTATGGAATTTGGTATACCCACagGAACACTTTATGGTCGTTGTAAAAGAGAAGGTATAGAGTTATCACGATCAAATCCAACTCCATGGTCAGAAGATGCCATGAATGAAGCATTAGTAGCCGTTAGAGTTGGTCATATGTCTATAAATCAGGCGGCTATTCACTATAATTTACCATATAGTTCACTATACGGCCGTTTTAAACGGGCCAAATATGATCCGAATGCGGCTACAACTAGTAACACTAGTGGTAATACTAGCGGAAGCATTGAAATAATTGAACATAGTCCAGAGAATTCGttgCAACAATTTAAATATAGCCCGGGTCCTTCGACACCAATACCACAACAACATCATCAACAATCAACCCCACAGCATCATATTCAAATTCAACACCAACCAATACATCATCAAGATATTGTAACATCAACAAACCAAATAATAATACATCAATCACCTCAATCACAGCCGgggcaacaacagcaacaaattcaacaaatttatcATCCACATAGTACACCAGAAAGAAGTTGA
Protein Sequence: MFKCCELQVQQRSSEGRAKNSGLLRTAEQLKIKGLCDTAETTDEILATADATITVSPDSLISTQQIITNQLTNQISNQLSNQQINNTIISTCGTTNTTTSTTTPHQRKSRVRKRSKSPAPDNSQQQQQSIAAALVAASSHSFTTANSDSIVNINPATGAITSVSNGANIIAVSSQATGSTETNTVTVAHGSGNIQSQQQTKHLIVVSDSSSSSHQGNIVGHKPAKLAKTESQTQNGNTTVSQSGPTAIVTQIVVARERSATAVASNQTTENKEGKMALGMGMNGGLLGMPMGYLDFAPEPPAPSATPVTEHVDINCTNDTRDISNPSETLDIDNHLAQQIHIQRIDQTPIQHQIHHAQQHQHQHQHQQHHQQQQQQHQQQHQQSQNNSSSSSVDTTNLIQNIKIEASCHSSDIQQHQISQNHPHQIQQQQGQSNQHQIITNATVMEIDPENIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMIANGSPNDNQQQHLSQEPHYTNLDSQHDNSKLNGPKTWTQDDMNSALDALKNHNMSLTKASVQYGIPSTTLWQRAHRMGIETPKKEGSTKSWNEDALNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASMEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRAKYDPNAATTSNTSGNTSGSIEIIEHSPENSLQQFKYSPGPSTPIPQQHHQQSTPQHHIQIQHQPIHHQDIVTSTNQIIIHQSPQSQPGQQQQQIQQIYHPHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -