Hcul021774.1
Basic Information
- Insect
- Hybos culiciformis
- Gene Symbol
- Runx1
- Assembly
- GCA_964007475.1
- Location
- OZ023275.1:1218730-1219740[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 2.7e+04 -5.2 2.0 59 62 28 31 11 43 0.53 2 2 1.6e-53 6.4e-50 168.6 0.0 4 94 62 152 59 152 0.98
Sequence Information
- Coding Sequence
- atgcatattgcCAATGACGTAACTTCTACAACTAACCAATCATTAAATGATGATtcgaaaaatgtaaataataatgaaaataataataacaacaacagtactaataataataaaaataataaaaaaattgatgacaGTCCTTATTTAACACCAGAAAATTTACAAGAGCGTACAATCGATGGATTATTAGCAGATCATCCAGGAGAGTTAGTTAAAACTGGATCACCACATGTTgttTGTACAGTTTTACCAACCCATTGGCGCTCAAATAAAACATTACCTGTTGCGTTTAAGGTTGTTGCTCTAGGTGAAGTGCTGGATGGTACAATTGTTACAATTATGGCTGGTAATGATGAAAACTATTGCGGAGAATTGCGTAACTGTACAGCAGTTATGAAAAATCAGGTTGCCAAATTTAATGATTTACGTTTTGTTGGGCGTAGTGGTCGAGGTAAGTAA
- Protein Sequence
- MHIANDVTSTTNQSLNDDSKNVNNNENNNNNNSTNNNKNNKKIDDSPYLTPENLQERTIDGLLADHPGELVKTGSPHVVCTVLPTHWRSNKTLPVAFKVVALGEVLDGTIVTIMAGNDENYCGELRNCTAVMKNQVAKFNDLRFVGRSGRGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -