Hcor016697.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hormaphis cornu
Gene Symbol
Mblk-1
Assembly
GCA_017140985.1
Location
CM029362.1:1399554-1430988[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-15 7.4e-13 48.1 0.0 1 42 321 363 321 365 0.95
2 2 1.3e-17 7.3e-15 54.6 0.0 1 41 877 918 877 922 0.95

Sequence Information

Coding Sequence
ATGGGAAGAAGAAAATGGCACCAGTATCAAGACATTTTGGCGAAAAATTATCTTCTGGAAGAAGAGTTGATGGACAGGAGAGAATGGGTTCCCGTCAAAACGTTTAACTCGTGTGATGTGAACACTGAACTGAACGTAACTGATCACTCACCTGCAGAGCTGGAGCCATCGTCTGAAACGGGCAGCTTGAGCGGCGGCAGTCGCAGCGCAGAGAGTCCGGAACCACCGGGCAGGCGGCCGTCGTCGTCCACCCCGTCGCCGGCGGCCCTAAAGCCGTGTCGCCCCCATGACCGGTCGCCGACACCCCCGCCTCCGCTGCCGCCGTCCACGTCGTCGCTGCTGCAGGAGCTGTCCAAAAATCCGGCCGCCGCAGCCGCCGCCGCTATGGCCGCGGTCGCGTCGCTGAACAACGTCGCTTCGTCGTCGTCGGCAACAAAGTCGTCTTCGGCCGGTGCGCCGGGTCCGCCGTCGCCCACAGCCCTGGACGCCGCGGCGGTGGCCTCGGGCCTGCCCCAATGGCTGCTGTTCGAGGCCACGCGGAGGCTGCAGGAGACCACGGTCGCCGCGGCCGCCGCGGCAGCGGCCGCAGCGGCCACCAGAAGCCGGTCGCCGCCGCCGCCGCAGCCCGAACGCCGCCTGCACCACCAGCACCAGCACCACCACCGACAGCTCACAGCACCACAGTCGCTGGACCAACCACTCGATCTCAGTGCCAAGAGCGGCGGCGGCAACAACGGCTCGTCGTCGCCGCCCGACGCGAAAAACGAGCCGGGGCCAGCCATCATCCCGTTCCCGTCAGATCTCATAGCCGCGGACATGGTGAACAGTCTGTCCAGCCTGATACCGAGCGCGTCTCTACTGCAATCGCTCAAGGTCCCTTCGCTCATCGCCAACAACCGGAATGTGTTCAAGTTGAAAACGGCCAAACAACCGAGCCACGTGCCGGGCCGGAAGACGTACACGGAGGAAAAGCTGCGAAACGCGCTGCGAGACATCCAGAGCGGTAAGTTGGGCACGCGCAGGGCGGCCGTCATTTACGGGATACCGAGATCGACGTTGAGGAACAAGGTGTACAAGATGGCCATGGAGCGGGACGGCGGCGGCGGCGTCGGTGGAGCCGGGGCCTGCAGCAGGGACGACGCGAGCAGGGAAACGGCCGTCGAGATGCTTCTGACGCCCGAAGACGAGGACGACGACGACAGGGACACGGCGTCCGCCGGCGAGGAAGACTGCAGTCCCGGGGCGGCGGCGACGGCGGAAACGGCGCAGTCGGCCGGGGACGAGGACAAGGACGGCAGGCCGTGTCCGCCCGCGCACCGGCAACAGCCCAAAACGCCGTCGTTCGTCACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTATCGTGCGGGCGCGCCCAACTCCGGAACGGACTACCGCTCGCCGTCGCCGCCGCCGACGCCTTCCGCGGCCAGGTTGCATCCGCCGCCGCCCATGGCACCGGACTTGTGGCCGGTCCTGGACCCGACCAAGTATCTAACGCAGTTTCTGTCCACGTCGGTGGCGGCCACCGCGGCCGCGCCTTCGCCGCGTTTGTCGTCTAGTCCGCCGCCGCTGCCGCCGCCTCCGCCGCCGCCTTCGCAACTGCAGCCGCCGCGGCCTTGCAGAAACCCGCAAGAGTTCTTCAAAGACGTCTCCGTGATGGAAATGATGACCAAACTGTTGGACGACGAACAAAAACAGTACTACGGGAAATCGGTGGACTGGAGACGGAGACTGTCGTCGTCCAACGGTTGCAGCTCGTCCGAACCGACCGCGGACGCCGCCGGCCGGTGCAACGACGACGACGACGACGACGACGACAACTCCAACTCTCCAAACTTCGTACTGAGAATACCCGCGTACAAGACGGCGCCCGGCAGGGGGCCGAGCGAATCGTCGACGAGTGGCGTCAGGGAACCCCGATCGCCCCCCGAACGGGCCAACAGCGTCCGCAGCGACACGTCCTCGCCGCCGTCGTCCGGTGGCGGCAAACATCCGGTCAGTTTGAGGGACGTGATCGCCAACAGCATCGCGCACAAGTTCCCGACCGGCGCCGATCCGCCGGTACTTCATCACATGCCGGCCGTCGATTCCCTAGCGCTGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAAACCGTCGTCGGGTCATCATCAACACGCGTCCGCCAGTTCCTCGGGCTCCGGCGGCGGCGGCGGCGGTTTCCACCATCATCATCACCACCACGCGGGCGTCTCGTCCAACTCGTCCGCCGCGGTGGCCGCTGCGGCGGCGGCGGCGGCGGCGATCGGCGGCGGAAAGGGCACCAGGCCGAAGCGGGGAAAGTACCGGAACTACGACCGGGACAGTCTGGTGGAGGCCGTGAGGGCGGTGCAGCGGGGCGAGATGAGCGTGCACCGGGCCGGGTCGTACTACGGCGTGCCTCACTCGACGCTCGAGTACAAGGTGAAGGAGAGGCACCTGCTGCGCACCAGGAAGCGCGAGCCCAAGAACAGGCCCGCCGCGGACTCCGCGGCCGAACACGAACGGAAAATCGATCCGCTATCGCCGCAGTCCTCGTCCTCGTCGTCGTTGTCCGTCCGGCCGGCGGACAAGTGCGTGGCGGCCGCGGCGGCCGGGACGCCGCCGTCTGTCAAGCTGCCCGCGCACGTGCAGTTCCCGTCGCCGCAACCGGCTGCGCACGGCAACAACAACGGGCTGAAGATGTTCGACGCCGCGGCTACCGGCGGCGGCGTGGTGCCGGTGGTGGCCGCGTACCAGCCGTCGTTCCCGTTCTGGGCCCCGAACCCGTTCCACATGCCCGTCGACTTCCAGCGGAATCAGGCGGTGCAGGCGTACACGTCCATGTCGATGATCCAGCGCATCCAAGCGGAATCGCGGATGCACCATCAGCAGCAGCAGCAGCAGCAGGCCGCGGCGTCCATCACCAGTCTGGGGAAAAACGCCCGGGAAGTGGCCGAGAGCCTGTACGACGGCACGGACAACGGCAGCTTCCTGGACGGCATCATCCGGTCCAGCCTGGAGACGGGGCTGAAGTCGGCGGCCGTTCACGCGGCCGAGAGGAGCGGCGGCGGCGGCAGTCCCGAACGAGCGGCGGTCGGCCCGAACGACCGCCGCCGCCGTTCGCCGTCGCCGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCTCGGTGGACGGGCTGGCCGCCGCCGCCGCCGCCCCGCGCGCCAAGTCCGAGGTCCGCTCGGCCGGCGGCGGCGGCAGCAGCACGGACGGCGAAGACGAGGAGAAGCCGCCGCCGGCGGAGGACGGTCCCGGACGTCGTCGGGGGTCCTCCCGTTCGCCGGAACGCGCCGTCGACGACGCACAGGACGACGCACAGGACGACGACGACGGGTCCGCGCCGCCGCCTTCCAAGGTGGTGAAACGATCGTGA
Protein Sequence
MGRRKWHQYQDILAKNYLLEEELMDRREWVPVKTFNSCDVNTELNVTDHSPAELEPSSETGSLSGGSRSAESPEPPGRRPSSSTPSPAALKPCRPHDRSPTPPPPLPPSTSSLLQELSKNPAAAAAAAMAAVASLNNVASSSSATKSSSAGAPGPPSPTALDAAAVASGLPQWLLFEATRRLQETTVAAAAAAAAAAATRSRSPPPPQPERRLHHQHQHHHRQLTAPQSLDQPLDLSAKSGGGNNGSSSPPDAKNEPGPAIIPFPSDLIAADMVNSLSSLIPSASLLQSLKVPSLIANNRNVFKLKTAKQPSHVPGRKTYTEEKLRNALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKMAMERDGGGGVGGAGACSRDDASRETAVEMLLTPEDEDDDDRDTASAGEEDCSPGAAATAETAQSAGDEDKDGRPCPPAHRQQPKTPSFVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRAGAPNSGTDYRSPSPPPTPSAARLHPPPPMAPDLWPVLDPTKYLTQFLSTSVAATAAAPSPRLSSSPPPLPPPPPPPSQLQPPRPCRNPQEFFKDVSVMEMMTKLLDDEQKQYYGKSVDWRRRLSSSNGCSSSEPTADAAGRCNDDDDDDDDNSNSPNFVLRIPAYKTAPGRGPSESSTSGVREPRSPPERANSVRSDTSSPPSSGGGKHPVSLRDVIANSIAHKFPTGADPPVLHHMPAVDSLALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKPSSGHHQHASASSSGSGGGGGGFHHHHHHHAGVSSNSSAAVAAAAAAAAAIGGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLLRTRKREPKNRPAADSAAEHERKIDPLSPQSSSSSSLSVRPADKCVAAAAAGTPPSVKLPAHVQFPSPQPAAHGNNNGLKMFDAAATGGGVVPVVAAYQPSFPFWAPNPFHMPVDFQRNQAVQAYTSMSMIQRIQAESRMHHQQQQQQQAAASITSLGKNAREVAESLYDGTDNGSFLDGIIRSSLETGLKSAAVHAAERSGGGGSPERAAVGPNDRRRRSPSPRXXXXXXXXXXXXXXXXXXXRSVDGLAAAAAAPRAKSEVRSAGGGGSSTDGEDEEKPPPAEDGPGRRRGSSRSPERAVDDAQDDAQDDDDGSAPPPSKVVKRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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