Hcor017257.1
Basic Information
- Insect
- Hormaphis cornu
- Gene Symbol
- JARID2_1
- Assembly
- GCA_017140985.1
- Location
- CM029362.1:19919240-19936099[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 3.7e-16 59.5 0.0 6 89 1492 1571 1488 1571 0.91 2 2 9 2e+04 -3.9 0.0 49 61 1585 1595 1582 1604 0.77
Sequence Information
- Coding Sequence
- ATGTCCGCCGCAGACGCCGACGCTGCCGCCGACGCCGCCATGTCTTCGAACGGAGGATCGGACGCGAAGAAACGAAAGCCGCCCAACGACGACGCGTTTCTCGAGACGAGTACGAAAAAAATCAAGGTACAGGCCCAGCGTAAATTTGCGCAAAATGCTGTGACTCCTACGAATACTCAAAAACTGATTCAGAGTCCAGTTGTACCTAGTAACACTGTAAAACCACCAATAAAACGTCCAAATACTGAAGACTTTCTTACTTTTCTTTGTTTTAGAGGTACAAGTTTATTACCACCTCGGTTAGATTTTTTTAATAAGCCTCAACGTTCAGCTCAAGAAATTGCTGCTGAAAAGAAAAGGAGAAAAAGCACTCCAGTTTTGTCTGTGAGTAATAATACTGAAAATTCAACCAATGTGAACGACAAACCAAGTGAAAAAAAAGATACAAAACAGTTACTTTCAAATACTGGTAGAATAACTAAACTAGGAAAAAAAGTTATTGGACGAAACCTAGTAAGGTCCAGTGCAAGGTATACTGTTAGGCAAGAACCTCTTACCTTGCGCCAGCGATCTCTTCATCATGGTTCTAAAATTAAAAAGTCGAAATTAAAAGTTAAAAAACCTTCTCCAGTGGCTAAGAAGGCTATTATAAAAGAAATAAAGGAAAATGGAAAACAAAAGTCATTAGATGGGAAAAATGTGCCAACGTTAAAATTCCGTAGTACTCGGTCAAATTCTTTGCCAAGTATTTTTTGTCCTGGAGTAAATCAACTTCGAGATCACAAAGGTAAATGGTGTAAAAGAGATGGCAGTAAAACTCCTTCGAGTGCGTCTAATGATTCTAAAGGTGTTGAAGAAAGGCCTTCGAGAAAAAAGACTACATCGAAAATTACAGATCATAGAAGTAACAGTCTTGGTAGCCTTAAACAAAAGTGTACTGACATTAAATGTAAAATTGCCAGTTCAAATGATAGAAAGACTAGGAGTTTAGCTGGTAAACATAAGAAGAGTGATCAAGATAATTATGTCATTCCTGAAAAAAAAAGTGTTAAAAGTATAAAAACTTCATACAAACATAGCAAAGCAAACAGTTTAAATGAAACAAAATTGTTAACAGTTGATGTTAAAAGAAAAACATCATCAGTCAACAATATGAAAACAAGTTGTGACAGTAACGATACATTTAGTTTGGTCCGTTCAAGGCCTCCTAGAAGAACTAAAGAAGCTGCCACTTTATACATGGAAATGTTAAGAAAAGATCTGAGGTGCCCTGACGAGCAAGAAGATGAGACATCATCCGTTGAAAGTTTTCCTGACCTTCCTAATACGCGGATAAATGAACAACGAGAACGAGAGTTAAAGGTTTTTTCCAAACAAAATATGGTAGAAAAAGAAAAATGTATAAAAAAATTATCTGAAAATAAGAATAAATCAAACGATAAATGTATTTCATCATCAGTAAACAATAAAAAGTCTGTAGTAGATAATAATGTTAAAGAGAAGAAAAAAAGTGAAGAAAGTATACTAAAAAAGAAAAGTTTGAAAGAAACAGTGAAAATTATTGCCACTTCTGAAAATGATGGAACATCGTCATTCAAAAGGAATCTAAGACCTCGTCGTTCTTCAACTATGCTAGATGATTATATTATGACTGATTCAGAAGAGGACGATTCTGAATCTGAACCCATAACTGCAGAAACAAAGAAAAGTGAAATCCCTGAATCATTTACCACTGCAGTGGAAAAATTAAAAAAATGCAAAAGTGTTGAAGAACTTGATAAAAAAATTCTTAAAACTAATAAGACTGACCCAAAACCGAAACAAGATTTAAAAAAAATAGATTCTGGTATAAAGAAGAATCTGTCTAAATCTAAGTCAAAAGATAGCTTATTAAAACACGCTAAAGAGCCTGAAATCAAGAATATCAGAAACACTACTGTCGAGAAGAAAACCGAGAAATTTTCAAAACATAAGACTGAAACTGTAGTAATTACAAAAAAATCATCTAAAACTACTGGCGAGATTACAAACAATTTTGTTAAAAAAGTGCCACTTTCCAATAAGTTTAAAAAGCAACTCATGAAAAAAGTAAATGTTTCGAACAAAAAAAATTTGGATCTGTTCAACAATAATGGAAATAAAGAAAAGTCTACGTTGTTATCTGTGATATCTTCATCATCATCTTCAATATTTAGTGGTGATACTAGTCAAACAAAAGAAGATGTTTTGGAGCACATGGCCACAAGTTTTGATGCCAAAGTGGATGCCGAGAAGCCTATTGTTAATAGCGCGGAAGAAGGACCTAAAGTTGAGGACGAAAAAAAAGAACATATTGTCACTGCTACTGACTTCAAAACAAAAATGGTTGCTAACAAAGGCAATGAAGTTGATAAATTCGATAGTAATGCAAAGTCAGTTGTTCAGTGCAATAAACAAAAATTGAAGAAAATCACAAAAATGGAAAACATGGGTTTGACTGCTAAGGAAGAACATGTGGGTGTGGTGGAAAAATTAGAAAATGTTATTGCTGTGCGGACTGTGGACAAAGTGGAGAAAACTGAATCTCTACAATTGGTGATGCCATTCAATAAAGTAGAAAGTGCTGTGCTTCACACTATGGCTAAGGATCTTTTCTTACAGGCACAAAAAAATGAGTTCAAGGTCACTGTACCCAAATACTTGGTTGGCAAAGATTTCCAACTGTCCAAACAATTCAAACATGATGACGGACTATCTGTGCTATCCGAGATCTGCAGTACTTTGCCTCGGTTTGATAAGCCAACCTTGCAGTGCAATACAGTGGTTGAAAAAAATGACAATAAATCATGTGTCGTAGCACAGCCGGCTCTTCTGCCACCATTGGTGCCACTACCGTCGTCATTTGAAAGCCGCACTGTTAAAATTGTCAATCTTGCTCGGGGCAATAATGCCATCACCACTGCTGCCATGAATGACCAAAAGGATTTGACTATGTCATGGAAACAAGTGTTGAAAAATCCCAAAGTGCTGAAAAATGGTTTTACTTCAACTGTCATTCCAGTTGAAGAAAACAACCTTATGCAGTTGTGTACTGAGAATAAATTGCAGTCTAATGATATTAAGCAGACAATATCAAATATGACCAGCAGTGAGAAGTCTTCTTCACAGAACGTTAGTGGCAATTGCGCTGTGGAGGAAAAGAAATTGGAACCATCTGCTTCCTATTTATGTCAAAAGACTAGCTCTTGTGATTTAAAATCTGATGTCTTTGATGCAAAGAGGGGTGTGCAGAACTCATCTTATTTGGCTAAAACTACCATACTGAATAGTACCAAGTACGACTTAAAGTTTGAAAAACGTCACTCTGCGGCTGTTGTCACTAACTGTGAGAAACCATTACACCAACAGCAGCGTAGAGACGCCGAAGTATCTTCATCTGATGATCTGCAGAGCCCTGAAAAGAAAATTTTTGGACATCAGCGACGGCTGTCTGCGACTCAGTCATTTAATGGCAACAGTTCTGATGCGTTTTCACCCGATAATGAGACTAGTGTTTATGCCTTCCAACCTGACTTGCCGGTTGCCAGCACTCCATTCCGTCGTAATAAGCCCCTGTCACCTGCCAAATCTAGGACGGTTTCACCTAATACGTCTATTTCAGTAAGTATTGAAAACGATTCAATGGAGGAAAAATCTCTTCAATCCACCGTATCTTCATCTACTGATGCTGACAGTGAAGAAGGAGGGCGTCTTTTCTACATTCCTTTGCCAGCTGGCGTTCAAGCTCAACCTTTGATCCAGGGTGTTACCGTAAAACTTGGCACGGAGGGACCTCAAAACAAATTAGTCATGAGCGCTAAGCTGGTTACCAAACCCCCAGCTTTGACAATACCAGTTAGTTCTATATCACCAAAACCAGAGCGAAAAATCAAGCCTCTATGTTCAACTAAAATCAACAACAGTTCTACTCCTGTTGGTACAGTACAACCAACCACTCGAACTGTTCAACCGGCAAAGTGTGTTCCCTCAACTTCTAAACAATTGTTACCATTATTGCCCCAACCACAAAACACGGAAAAAAAAGACGAAAAGAAACGATTACAACAAATTACTACTGCCATTACCAATAAGGAGTTGAAAAAATCGTCATCGTCGTTTTCCGTGTCTGTTGTTGACAAAAGAAAACGAAAAAAGACTGAAAAACAAGTAAACAAAAGAAAGTCCAGTGAAAAAGTGGCTTCCAAAAAGAAATTTTTAAAAGAATGTGCTGAAATTATGGAAGCACCAACGTTTTACCCATCTGAAGAAGATTTCAAGGATCCGTTAGAATATTTTGACATTGTAAGGCCTGTTGCTCAAAAGTACGGGATATGCAGAGTCGTGCCACCTCCTAGTTTCAAGCCGGAATGTAAAGTTAGTGATGGCATGCGGTTCACGGCCTATAACCAGTATGTGCACAAGATGATGGATCGGTGGGGTCCGAATGTCCGCGAGTTGATGGCCATGAAAAAATACCTTAAAACGCAGTCCATAGTACTGTCCAATCCACCACTTATTAGTGGGGTAGAATTGGACTTGCCAAGACTGTACCATACGGTTCAGAAACTGGGTGGCCTCAAAGAAGTAATAGAGTTAGACAAGTGGTGTCGTGTCGCTGACTTGATGAAAATACCAAAGAATGCACAAGTTTCCAAGCTCGATGACATATATTGCAAGTATCTTTTGCCTTATGATACTCTCTCGCATGAGGAACGACAGAAATTAATTGCTGAAGTTGATAAGGAATGGAAACAGATCTGCAAGAAAGATGATTCTGAAAACGAATTGTATGAAGATGTCAATGATTGCATAAAAAAGGGTCGTAGCATTGCATTAAGTGTCTATTACCGGGTGGCTCGCAATACTGCTGCCATGTGGTATAAAGAAGAGCAGAATCAAGGTGGCAGTAGCAATTTATCTTCATCCGCATCAGTGTCTAGTAAACAAAGTACGGAGGTTATTCGTGCAGAAGAAGTTGAATCGTTATACTGGAAACAAGTACACGAGAAAAAGAACCATATTTGCGTGTTGTCAGGATCTATAGATTCTGGTGCTGAGGGTTATGGATTCCCCACTGCCAAGACAGCCACGTTCACCCAACACCCTTGGAACCTGAAGGTATTGACAAACAACTCGGCATCGGTACTTAAATCACTCGGCCCAGTTATGGGCATGACTGTGCCCACCATACATATGGGCATGATGTTCTCGGCCTGCTGTTGGTATAAGGACCCTCACGGGTTACCTTGGATTGAATACTTGCATACAGGCGCTGACAAAGTGTGGTATGGCGTACCGTCTGGTCGGAGTGACAAGTTTCAGGCAGCTATGAAGCGATTATTGCCTCAAGCTGTAGCTGAGGGGCAAAACCATCATAGTTGGCTGGCTGCCGACAGCGGTATGGTGCCTCCTAACATGCTAATTGAAAACGGAGTTAGCCTCACCAGAACCATCCAAAAACCAGGACAGTTTTTGTTAGTTATGCCACGCGCATATACTTGTAACGTGTCTACTGGTTATGTTATTTCCGAAAGTGTTTACTTCACCCAGTCCAACTGGCTAAATGGTGCCGAGAAAATTTTTCAGGACTTGCAAAGAAATTGTGAACCTGCTGCATTTTCATTGGAAAAATTACTGATAAACATGTCCAGCGATTCACGTACGCCTCAACATATTCTGAAGCAGCTGCTTGGCATATTAAGTAATATGAGAGACTGTGAAATAGCACTAAGGAGTCAGTTGGTTGAGGATCTGGGCTTGAAGTCATCTGAACGAATTCGGCCCGTCACATCTAAGTCAAATGAACAAGATGATGACTATGAGTGTGATGTGTGCCATTCTATACTTTACATATCAATGGTAAACAACTCACACGAAGACTGCGACTATTGTTTAAGGCACGGTATTGAGATCCTAACAAAAAAACACAATCAGCTCAAGTATTGCAAGTTTATGTACACGTTTAATGAGGATGAGTTAGATTCAATTCTGGTTAAACTGCGGGAAAGAATTGTTTAA
- Protein Sequence
- MSAADADAAADAAMSSNGGSDAKKRKPPNDDAFLETSTKKIKVQAQRKFAQNAVTPTNTQKLIQSPVVPSNTVKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSAQEIAAEKKRRKSTPVLSVSNNTENSTNVNDKPSEKKDTKQLLSNTGRITKLGKKVIGRNLVRSSARYTVRQEPLTLRQRSLHHGSKIKKSKLKVKKPSPVAKKAIIKEIKENGKQKSLDGKNVPTLKFRSTRSNSLPSIFCPGVNQLRDHKGKWCKRDGSKTPSSASNDSKGVEERPSRKKTTSKITDHRSNSLGSLKQKCTDIKCKIASSNDRKTRSLAGKHKKSDQDNYVIPEKKSVKSIKTSYKHSKANSLNETKLLTVDVKRKTSSVNNMKTSCDSNDTFSLVRSRPPRRTKEAATLYMEMLRKDLRCPDEQEDETSSVESFPDLPNTRINEQRERELKVFSKQNMVEKEKCIKKLSENKNKSNDKCISSSVNNKKSVVDNNVKEKKKSEESILKKKSLKETVKIIATSENDGTSSFKRNLRPRRSSTMLDDYIMTDSEEDDSESEPITAETKKSEIPESFTTAVEKLKKCKSVEELDKKILKTNKTDPKPKQDLKKIDSGIKKNLSKSKSKDSLLKHAKEPEIKNIRNTTVEKKTEKFSKHKTETVVITKKSSKTTGEITNNFVKKVPLSNKFKKQLMKKVNVSNKKNLDLFNNNGNKEKSTLLSVISSSSSSIFSGDTSQTKEDVLEHMATSFDAKVDAEKPIVNSAEEGPKVEDEKKEHIVTATDFKTKMVANKGNEVDKFDSNAKSVVQCNKQKLKKITKMENMGLTAKEEHVGVVEKLENVIAVRTVDKVEKTESLQLVMPFNKVESAVLHTMAKDLFLQAQKNEFKVTVPKYLVGKDFQLSKQFKHDDGLSVLSEICSTLPRFDKPTLQCNTVVEKNDNKSCVVAQPALLPPLVPLPSSFESRTVKIVNLARGNNAITTAAMNDQKDLTMSWKQVLKNPKVLKNGFTSTVIPVEENNLMQLCTENKLQSNDIKQTISNMTSSEKSSSQNVSGNCAVEEKKLEPSASYLCQKTSSCDLKSDVFDAKRGVQNSSYLAKTTILNSTKYDLKFEKRHSAAVVTNCEKPLHQQQRRDAEVSSSDDLQSPEKKIFGHQRRLSATQSFNGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPLSPAKSRTVSPNTSISVSIENDSMEEKSLQSTVSSSTDADSEEGGRLFYIPLPAGVQAQPLIQGVTVKLGTEGPQNKLVMSAKLVTKPPALTIPVSSISPKPERKIKPLCSTKINNSSTPVGTVQPTTRTVQPAKCVPSTSKQLLPLLPQPQNTEKKDEKKRLQQITTAITNKELKKSSSSFSVSVVDKRKRKKTEKQVNKRKSSEKVASKKKFLKECAEIMEAPTFYPSEEDFKDPLEYFDIVRPVAQKYGICRVVPPPSFKPECKVSDGMRFTAYNQYVHKMMDRWGPNVRELMAMKKYLKTQSIVLSNPPLISGVELDLPRLYHTVQKLGGLKEVIELDKWCRVADLMKIPKNAQVSKLDDIYCKYLLPYDTLSHEERQKLIAEVDKEWKQICKKDDSENELYEDVNDCIKKGRSIALSVYYRVARNTAAMWYKEEQNQGGSSNLSSSASVSSKQSTEVIRAEEVESLYWKQVHEKKNHICVLSGSIDSGAEGYGFPTAKTATFTQHPWNLKVLTNNSASVLKSLGPVMGMTVPTIHMGMMFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSGRSDKFQAAMKRLLPQAVAEGQNHHSWLAADSGMVPPNMLIENGVSLTRTIQKPGQFLLVMPRAYTCNVSTGYVISESVYFTQSNWLNGAEKIFQDLQRNCEPAAFSLEKLLINMSSDSRTPQHILKQLLGILSNMRDCEIALRSQLVEDLGLKSSERIRPVTSKSNEQDDDYECDVCHSILYISMVNNSHEDCDYCLRHGIEILTKKHNQLKYCKFMYTFNEDELDSILVKLRERIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -