Hvit010525.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_951804965.1
- Location
- OX638092.1:20823829-20826300[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.014 2.4e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 19 3.1e-07 0.0052 17.7 15.9 3 19 186 202 185 202 0.95 4 19 2.3e-07 0.0039 18.1 11.8 3 19 239 255 237 255 0.91 5 19 2 3.3e+04 -4.7 1.3 6 10 280 284 280 284 0.91 6 19 1.5e-09 2.5e-05 25.0 13.7 1 19 290 308 290 308 0.99 7 19 8e-06 0.13 13.1 18.8 3 19 345 361 337 361 0.86 8 19 2 3.3e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 19 5.9e-06 0.099 13.6 18.3 1 18 395 412 395 413 0.97 10 19 2.3e-08 0.00039 21.2 16.9 1 19 422 440 422 440 0.99 11 19 0.00014 2.3 9.2 5.5 10 19 489 498 486 498 0.90 12 19 0.0021 34 5.4 8.6 1 12 508 518 508 518 0.96 13 19 0.35 5.8e+03 -1.7 3.3 14 18 547 551 547 552 0.85 14 19 0.22 3.6e+03 -1.0 0.1 8 12 568 572 567 573 0.82 15 19 1.1e-05 0.19 12.7 4.6 1 11 588 598 588 599 0.97 16 19 0.63 1.1e+04 -2.5 0.9 15 18 613 616 612 617 0.85 17 19 0.012 2e+02 3.0 12.4 1 18 628 645 628 646 0.88 18 19 2 3.3e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 19 4.7e-05 0.79 10.7 14.0 1 16 687 701 687 706 0.91
Sequence Information
- Coding Sequence
- ATGGCGCGACGGTACAAGGACGCAGCCGCAAAACTCCAGCAAAACGTGCAAAAACATCTCAAAGATATGAAGGATCTATCTTCCTCCGAAGATGAGGAGCCTTACGAGGCCAGCGTCATCGAGGGAATGTTCCAGAGCTACTGGCGAGGAGGCGGAGACACTCAGATGCTGAACCGAACCAAGAATCTTCTGGAAGAGGCCATCAGCGGCCGCTCGGTAGCTTGCCTCATCTGCATCAGTTCGATCAAACGGAACCACGCCGTCTGGACTTGCGATCACTGCTACTCCTACTTCCATCTCTCCTGCATTCAGAAATGGGGCAACGACAGCATTAGTCTGCGCAGTATGGAACCTCAAGCCACAATAAGCGTCTACAAAGCCCAGAAAATTGAATGGTGCTGTCCCAAATGCCGTAACTCTTACAGCAAGGATGAAATACCTCGGAAATATAGATGTTTCTGTAGCAAAACTGATAATCCACCTGTCCACCCATGGTTGATCCCTCATACTTGTGGGGAAGTGTGTGAAAAGAGGTTGTCTACTGGGGACAACTGTAAACATAAATGTCTCCTGCTGTGCCACCCTGGCCCATGCCCCCCGTGCCCTCAAATGGTAAATGGTATATGCTACTGCCAAAAAGAGCGGAAAAAAGTCAGATGCAGTGCAGCAAAGTGGTCCTGTGGACAACAGTGCAGGAAAACACTGCTATGCCAGACACACAAGTGTGAACTACTCTGTCATGATGGAGAATGCTCACCCTGCACCTACACCAGTCTCCAACCCTGTCAATGTGGAGCTGAGAAGACCAAAAGACCTTGTGATGACCCATTCTGGCACTGCAAAAAGACTTGCAACAAACCATTCTCTTGTGGATATCATAAATGTGAGAAGGTATGCCATTCAGGCAGCTGTGGGGAGTGTCCTAACTCCGGCAGAAGGTCCTGTCCCTGTGGTGCCAATCAGCGCTACGTCCAATGCCCTGATACCATGGAAACCTGTCTGGGAACTTGTGGAAAGAAGCATGAAGATTGTGAACACAGCTGTCCCGAGAAATGCCACAAAGGTGCCTGCCCTCCTTGCCAAGTTTTAATACAAAAGAAGTGCCAGTGCAACACTCATGAAAGGTCCCTACCATGCAGTAAGGAGTTCAAATGTGAAACGAAATGCAGGGGCATCAGACCTTGTGGAAAACATGGATGTGCCAGGAAATGCTGTAATGGCAACTGTCCTCCATGTGAGAAAGCCTGTGACAAGCCTTTACAATGTGGCCGCCATAAGTGTACCACGATTTGCCACCATGGTCCTTGCTACCCCTGCCCATTAGAGTCGAAAATAACCTGCAGATGTAAGGAAACTTATTTGACAGTTCCATGTGGCAGAGAAAGATTCACAAAACCACCTAAATGCAGCCTCCCATGCAAACTGAAGTACAAGTGTGGACACTCTGAAGAAAATAAGCATTACTGCCATTTCGGAGACTGTCCTCCATGTAAAGCAATCTGCTACAAAACTTACCCGAAATGTGGACATGAATGCAAGGCCACATGCCATGAATACAAAGCTGTGGTCTTCAAACAGATTGAAAAGCCAGCCACTCCTTGGGAAGTGCAACCACCAAAGACCAAAATCATGACATTAGAATGCCCTCCATGTAACATGCCGGTCTCTGTCATATGCTTCGGAGAACATGAGACAGACAGCCAACCATGCCATTCTGCAACCAGGAGACCATGTGGCAGAGAATGTGGTAAACCCTTGGCCTGTGGAAATCACAACTGTTCATTACTATGCCACTTGTATAGCCCTGATGCTGACTACCCTAAAATTCCTTATTTGTGTAAGCCTTGTAACAGGGAGTGTGTGAAACCCCGTCCAGAAAAATGCTCCCATAAGTGTTCCATCAGAGCTTGCCATCCTGAACCATGTCGTCCATGCGAGGTTTTGGAACGTATACCCTGCCACTGTGGCATCACCGAGCTGTACCTTAAATGTCGAGAATACAGCACAGCGACTGAAGAAATGCTCTCATGCAAACAGCAATGCCCAAAGAACCTAGAATGCGGTCATCGCTGCAAAAACACATGCCATTCAGGTACCTGCCACAACCAAATTTGCACCAAGAAAACCAAGATACACTGCCCCTGTGGCAACATCAAGAAAGAAGCCCCCTGTAACTCAGTGAAAAGTGGAGAAGCCAAGGTTCTTTGTGATGAAACATGCGAAGTAAAAAAAGCTGCAGCTAGATTAGAGGCAGAGAAAGAACAACAACGACTGAAGCAGttagagaaagaaagaaataaaaaagagCTGGCTGAATACGAGTGGAAACTCAGTGGGAAAAAGAAGAAATACAAAGAGAAGAAGGTTGTGATGAATACGGATGATAGGAGCTGGATACATCGGTACTGGATGCCTATCCTTGCGTTTTTAGTTGTTATACTGGCAGCTATCTACTATGCTTTAAATTTGTAA
- Protein Sequence
- MARRYKDAAAKLQQNVQKHLKDMKDLSSSEDEEPYEASVIEGMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVACLICISSIKRNHAVWTCDHCYSYFHLSCIQKWGNDSISLRSMEPQATISVYKAQKIEWCCPKCRNSYSKDEIPRKYRCFCSKTDNPPVHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQMVNGICYCQKERKKVRCSAAKWSCGQQCRKTLLCQTHKCELLCHDGECSPCTYTSLQPCQCGAEKTKRPCDDPFWHCKKTCNKPFSCGYHKCEKVCHSGSCGECPNSGRRSCPCGANQRYVQCPDTMETCLGTCGKKHEDCEHSCPEKCHKGACPPCQVLIQKKCQCNTHERSLPCSKEFKCETKCRGIRPCGKHGCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHHGPCYPCPLESKITCRCKETYLTVPCGRERFTKPPKCSLPCKLKYKCGHSEENKHYCHFGDCPPCKAICYKTYPKCGHECKATCHEYKAVVFKQIEKPATPWEVQPPKTKIMTLECPPCNMPVSVICFGEHETDSQPCHSATRRPCGRECGKPLACGNHNCSLLCHLYSPDADYPKIPYLCKPCNRECVKPRPEKCSHKCSIRACHPEPCRPCEVLERIPCHCGITELYLKCREYSTATEEMLSCKQQCPKNLECGHRCKNTCHSGTCHNQICTKKTKIHCPCGNIKKEAPCNSVKSGEAKVLCDETCEVKKAAARLEAEKEQQRLKQLEKERNKKELAEYEWKLSGKKKKYKEKKVVMNTDDRSWIHRYWMPILAFLVVILAAIYYALNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- -
- 80% Identity
- -