Hvit028644.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- ZFX
- Assembly
- GCA_951804965.1
- Location
- OX638108.1:2396015-2430224[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.017 1.3 10.5 0.1 3 23 190 210 188 210 0.96 2 14 0.0013 0.1 14.0 1.6 1 23 328 350 328 350 0.99 3 14 0.00038 0.03 15.6 1.0 1 23 356 379 356 379 0.95 4 14 0.077 6 8.4 5.4 1 23 384 407 384 407 0.90 5 14 1.9e-06 0.00015 22.9 1.1 3 23 757 777 756 777 0.98 6 14 0.0022 0.17 13.2 2.3 1 23 783 805 783 805 0.98 7 14 0.038 3 9.3 7.6 1 23 869 891 869 891 0.96 8 14 0.0071 0.56 11.6 1.1 1 23 926 948 926 948 0.95 9 14 0.00022 0.017 16.4 0.2 1 23 956 978 956 978 0.92 10 14 0.0059 0.46 11.9 0.8 1 23 987 1009 987 1009 0.98 11 14 0.00016 0.012 16.9 0.9 3 23 1059 1079 1058 1079 0.98 12 14 0.016 1.2 10.5 5.6 1 23 1096 1118 1096 1118 0.97 13 14 2.6e-06 0.00021 22.4 0.7 1 23 1124 1146 1124 1146 0.98 14 14 6.8e-06 0.00053 21.1 3.3 1 23 1152 1175 1152 1175 0.98
Sequence Information
- Coding Sequence
- ATGGATGTTGATCCCCTAAGTTCGTATCAGCAATATTCATACCATCTTTTTCATCCCCCATCTATCCCCCAATCCAACCACACACTACCCCCCAACCCAACACCACTAGCCACCAACCTAACACCACTACCCATCAATCCAACACCCCTACCCAACAACACGCCACCCCTACCCGTAAACCCGACACCCCTACCCAACAACACGCCACCTCTACCCATCAACCCGACACCCCTACCCGTCAACCCAACCCCTTTACCCATCACACCCAACATTCAAACACTACCCAACCCCCATCATCCAACCTACCCCTACACAAACAACTACCCCCCTATACCCTACCCAATGCCTAGCCTTAACTATCAAACCATGGATCAAATAGTTAACAGACCAATGGAACAAGATTACCCAACCGAAGAAACCAACGATCAAACACATGACatacaagaagaagaagacatcaAGCCGgatattacaaaaattaaaattaaaagaaacagaaaAGTGAAAGGTAAAACCAGTAGTTACTGGAATAAAAAGATAACAGATAAGGATTTTAAGTTCTACGGCTGTTCGGTCTGTAATATATCGTTCCGGGAACTCTCCGAGTTAGACTCTCATGTGACTATACATTCTAACCGGGTGACCACCTACGATGTTAGAATAcaaaacaagaagaagaaaaagaagcttAAGAAAgagatgaaaaagaaaaaaaagattgcTAAAGTGAAGACGGAGCCGGAATTAGAAATTAAACCAGAGGATGGTTATATTGGTACGGAGAAGGCTGGTGTTGAAAACAGTCAGAAAGGTGAAAAATGTGATGGCAGCCTGAAAGGTGACAGCCAAAAAGATGGTACCAGCCAAAAGAGTGATGACAGCCAAAAAGgTGCTGGCCAGAAAGGTGACAGTGGTATAAACGGAATGAAGAATGGTTACAAGAAACCAGGGAAGGTGGTTGTCAATAACAAAGATGCTGTGTACAAATGTTTTGCTTGTAACAAGCAATTCGCATTaagttattatttgaaaatacatgTCCGGTCACATACAGaTGAAAAACCATATCTTTGTAATTATTGCGGGCAGACATTTATAACAGCGAGTAAAAGAAGCAGACATGTAAAAAGGATTCATCTTACGCTCCGACATCAATGCAGGATATGCTTCAAGTtctttaatagATTTGAGCTACTCACGAAGCATTTTGACCAGAAACATGAAGACCAAAAGTTAGAAGGGGAACCGTACGatTACAACGCAATACTTCCGTACCTAACTGATTTGGATGACCAATTCAAACTGGAAGGGGATAAAAAACCTAAGACAGAAGAGCTATGGGGGGACGTGGGGGCCACGGAGGCCACGCAGGCCACGGCACCCACGGAACCCACGGAATCCACAGTGACCACAGATACGTTTGTTTTAGAAGGAAAGGTTGAGATTGAAGAAGACACGAAACCGCCAAAGTTCGAGATTGAGCAAGTGGAGGTGAAATGCGAGGCATCTTCCTCGGAGGAATCTGATGAGGAGGTCATAGACGAACCTTTCGAGCATCAAGACTCCGACGACGAGCCGCTAGCGAAGgaaagACAGAGATCGAACCCCCTTAATGCCCATATCTCAGAGATAGAACAAGTGAAGGTGAAATGCGAGGCATTTGATATCGAGCTCGCAGATGAAATATTCGAACAATATTTTAACTCCGACGACGAGAGACAGGGATCAAATCCCCCTAATACCCATATCTTAGAGATAGAAAAAGTGAAGGTGAAATGCGAGGAATTTGATATCGAGCTCGCAGACGAAATATTCGAACAATATTTGAACTCCGACGACGAGAGCTATATCTTTGAGGTAGATCAAGTGAAGGTGAAATGCGAGGCATGTGATGCCGAGGTCAAAGACGAAATATTCGAACAAGACTTCGACGACGAGAGACAGGGATCAAACCTTCCTAATACCCTTATCTCAGAGATAGATCAAGTGAAGGTTAAATGTGAGGCATGTGATGTCGAGCTCACAGACGAAATATACAAACAACAAGATTTCGAAGACGAGAGGGCGAAATTCGTTGTGACTCTAGAGGCCCCGGAGGCCTCCAATGATGCTATGGAGCATGACTCCTCCGACGAGGTCAAACAAGAAAGGTTACCCCCCACAGATGATGAAGAGGAATATTTCCCCCCGGGGGGTTGCGCGCGATCCCCCCCGGAAGATATCCCCGCCCCCCTCACCCCCGTCAGACGGAAAGGGGGGGTGGGGGCTTGCGAGCTTTGTAACAGAACATTTAGTAGTACCTCGTACTTAAAAGTCCATATGAGAACACATACTgGTGAGAAGCCATTTTCTTGTTACGTTTGCAAACGCGGTTTCATAACGGCCAGCAAGATGCACAGACATGTTTTAACACATGACGAGACTTGGGTCGgtgaaaataaaataaaacctgaaGGAGCTGAGATTAAATCTGAAAACGAGGACGACGATGCTGATAAGAGAATTAAAAAGGAAAATTCCAAAATAGAAAATGCAAAAGATAAACTTCTCCGGAAACCGAACAAGAGAATGGATCCAAAGCTCAAGAAGAACCGCCGACGGCCGCACTGCTGTGAATACTGTGATAAGAAATTCATGCACATAGAAACATTACAAGTTCACAAGAAGTCTCATGACGGCGAAATACTTATATACAAATGTACTTACTGTCTGGAGCCTCAACTAGACCAGgtAGCGAAGGCAGAACACGAAGTTACACATACGGGACCGAAACCATATCTATGTACACTTTGTGGACGGCAGTATAACAAGAAGGGAGCTTTGTTGTACCACAGAAAGAATCATAAGGCTCAAGATGAAAAACAATTCATATGTGATATTTGCTCAAAGAGATTTGACTCGCAAGCGAAGCTGGCCAGGCATATACCGACTCACTCTACTGAGAAATTCGTGCTTCGTTACGAATGTCCTGTTTGTGCGAATATGTTTAACACGCGCTGGCACATACAAATGCACCTTAAATCACATCAGAAAGAAGGATTAATACTGGAAGAGAACAGGAATGCGGTACTAGCGATGGTGATGCAGAACGCTCGCAAGATCCCCAAAGGCCCCCACGACCCCTCGCACCGCCCCCCGGCCCCCGCGCCCGAGGGGGACGAGCGCTCAAGGATATGCAACATATGCGGACAGGTTTTCCAACATTTCTACTATTTAGAAGAACATCTCAAGACGCACGGGAACAAAATAGCTGTCAACGATTTAGAAGAAGAGGAAGAGAAAAAATATACCTGTCAGGTTTGCTCAAAATCATTCAAACTGCATTACTATCTAAAGCTACACAGTTTCACGCACACAAAAGAGAAACCTTTCATATGTCAACAGTGTGGCAAAGGTTTTATAACTAAAGGGAAGCTTAAACGACATTTGGAAACGCATCAAGGGCTAAAAAAATACCAGTGTcatatttgttataaatttttcaCTAGACCAAGTTATATGAGAATTCATGTGAGGACTATTCATGGTACTCAAGATTACAATTTTAGAGATTATGGCGCTGAACCGGTACCTTTAGTGATGCCTATGTCTGATATATGtagcttaacacgttga
- Protein Sequence
- MDVDPLSSYQQYSYHLFHPPSIPQSNHTLPPNPTPLATNLTPLPINPTPLPNNTPPLPVNPTPLPNNTPPLPINPTPLPVNPTPLPITPNIQTLPNPHHPTYPYTNNYPPIPYPMPSLNYQTMDQIVNRPMEQDYPTEETNDQTHDIQEEEDIKPDITKIKIKRNRKVKGKTSSYWNKKITDKDFKFYGCSVCNISFRELSELDSHVTIHSNRVTTYDVRIQNKKKKKKLKKEMKKKKKIAKVKTEPELEIKPEDGYIGTEKAGVENSQKGEKCDGSLKGDSQKDGTSQKSDDSQKGAGQKGDSGINGMKNGYKKPGKVVVNNKDAVYKCFACNKQFALSYYLKIHVRSHTDEKPYLCNYCGQTFITASKRSRHVKRIHLTLRHQCRICFKFFNRFELLTKHFDQKHEDQKLEGEPYDYNAILPYLTDLDDQFKLEGDKKPKTEELWGDVGATEATQATAPTEPTESTVTTDTFVLEGKVEIEEDTKPPKFEIEQVEVKCEASSSEESDEEVIDEPFEHQDSDDEPLAKERQRSNPLNAHISEIEQVKVKCEAFDIELADEIFEQYFNSDDERQGSNPPNTHILEIEKVKVKCEEFDIELADEIFEQYLNSDDESYIFEVDQVKVKCEACDAEVKDEIFEQDFDDERQGSNLPNTLISEIDQVKVKCEACDVELTDEIYKQQDFEDERAKFVVTLEAPEASNDAMEHDSSDEVKQERLPPTDDEEEYFPPGGCARSPPEDIPAPLTPVRRKGGVGACELCNRTFSSTSYLKVHMRTHTGEKPFSCYVCKRGFITASKMHRHVLTHDETWVGENKIKPEGAEIKSENEDDDADKRIKKENSKIENAKDKLLRKPNKRMDPKLKKNRRRPHCCEYCDKKFMHIETLQVHKKSHDGEILIYKCTYCLEPQLDQVAKAEHEVTHTGPKPYLCTLCGRQYNKKGALLYHRKNHKAQDEKQFICDICSKRFDSQAKLARHIPTHSTEKFVLRYECPVCANMFNTRWHIQMHLKSHQKEGLILEENRNAVLAMVMQNARKIPKGPHDPSHRPPAPAPEGDERSRICNICGQVFQHFYYLEEHLKTHGNKIAVNDLEEEEEKKYTCQVCSKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHQGLKKYQCHICYKFFTRPSYMRIHVRTIHGTQDYNFRDYGAEPVPLVMPMSDICSLTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -