Hvit029167.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- -
- Assembly
- GCA_951804965.1
- Location
- OX638108.1:6719761-6727538[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.063 4.9 8.7 0.1 2 23 9 31 8 31 0.93 2 33 0.0058 0.45 11.9 0.6 1 23 53 76 53 76 0.96 3 33 0.0044 0.34 12.3 0.4 2 23 82 104 81 104 0.91 4 33 0.0018 0.14 13.5 0.9 1 23 108 131 108 131 0.96 5 33 0.00023 0.018 16.3 0.8 1 23 136 159 136 159 0.97 6 33 0.051 4 8.9 0.4 2 23 196 217 196 217 0.97 7 33 1.4 1.1e+02 4.4 1.7 1 23 267 289 267 289 0.97 8 33 0.064 5 8.6 1.1 2 23 314 336 313 336 0.96 9 33 1 82 4.8 0.2 2 23 357 379 356 379 0.92 10 33 0.00011 0.0085 17.3 1.4 1 23 384 407 384 407 0.98 11 33 0.0016 0.13 13.7 0.6 1 23 411 433 411 433 0.95 12 33 0.16 12 7.4 5.9 2 23 465 487 464 487 0.95 13 33 0.11 8.9 7.8 3.0 1 23 548 571 548 571 0.96 14 33 2.7 2.1e+02 3.5 0.1 2 23 600 622 599 622 0.92 15 33 0.4 31 6.1 0.6 1 23 643 666 643 666 0.92 16 33 5.8e-05 0.0045 18.2 0.1 1 23 671 694 671 694 0.97 17 33 0.0075 0.58 11.6 0.1 1 23 699 722 699 722 0.92 18 33 0.027 2.1 9.8 0.2 2 23 728 750 727 750 0.91 19 33 0.0054 0.43 12.0 3.2 1 23 754 777 754 777 0.97 20 33 2.1 1.6e+02 3.9 1.9 1 23 823 845 823 845 0.95 21 33 3 2.4e+02 3.4 0.1 2 20 873 891 872 895 0.79 22 33 1.1 83 4.8 6.7 1 23 915 937 915 938 0.96 23 33 0.019 1.5 10.3 4.5 1 23 943 966 943 966 0.95 24 33 0.0055 0.43 12.0 2.4 1 23 971 994 971 994 0.91 25 33 0.00021 0.017 16.4 1.7 2 23 997 1019 996 1019 0.95 26 33 0.021 1.6 10.2 1.2 1 23 1102 1125 1102 1125 0.96 27 33 0.018 1.4 10.4 0.2 2 23 1200 1222 1199 1222 0.92 28 33 7.7e-05 0.006 17.8 0.5 3 23 1229 1250 1227 1250 0.95 29 33 0.0013 0.1 14.0 3.7 2 23 1255 1277 1254 1277 0.95 30 33 0.0029 0.23 12.8 0.6 1 23 1282 1305 1282 1305 0.97 31 33 0.015 1.2 10.6 5.7 1 23 1309 1332 1309 1332 0.97 32 33 0.12 9.1 7.8 1.7 3 23 1340 1360 1339 1360 0.96 33 33 6.6e-06 0.00052 21.2 1.3 1 23 1366 1388 1366 1388 0.99
Sequence Information
- Coding Sequence
- ATGAGGCTGAACATAGTAAATTTAACTTGCAAAATATGTCAACTAACATTCACCGATCTCGATCCTGCGATAGATCATCTAACAACCACACATCAACTCGCATATGACAAATCATTTCCTGACGTTATCGAAACGTTTAAACTTCACAATGATAGTTACACTTGTCACATATGCGGAGAAGAATTCGTGTTCTTTAAAATTCTCGTCAGgcatattcgagatattcacaCAGAGAGCGAGATAACATGCGATTTATGTGGCAAGAGGTTTGTAAGGCACGCAGCGTACTTAGTACATAAAGAATATGCCCACGGGCCTGGTTTTACGTGCAAAGCGTGCGGTAAAGACTTTTTCAGTAGCTTCAAGCTAAAAGCGCACGTAGCTAAAGAACACGAAGGGTTCAAATTCAAGTGCTCTGAGTGTACTGAGGAGTTTACCACTCCGTACCAAAGAAAGAAACATGTCATAACTGCCCATAAAACAAACGCAGCTTCGTTCTCTTGTCCGCACTGCGAGAAACTCTTTACTTGCGCATCGCACCGACATTACCACGTGAGAAAAGTGCATTTAAAGGAGAGGAACGCAAAATGCCCCGTCTGTCAGGAGGAGGTATTCGATAGCAACCGTCTAAAGGTGCATATGACTAAACACTTAAGAGAAAGGAATCATGTCTGTGATATATATGCGAAACCGAAACCTGAAAGAACAAAACAGAGTTTCAAAGAATGCAAACTAAGGAACCTGCAAACTTTGATCAACAACACCTCAGTGATGCCATTTAAATAtcgaaacaaatattatatttgctACTTTTGTGGCGAAAACAAAGATACATACTTCGGTTTAAAAAAACACACTCAAACTCACATTCCTTGCTCGAAGACCGAGCTGAATCTTCCCGAGTATAGAACCGAAATGAAAATAGACGTTTCAGTTATCAGTTGTAACATATGTTCAGAACACTATCCGACAATCAAAAAGTTGCTAACACATTTGCAAATGAAACACAAGCTTTGGTATCGCGAAGACTTGTCTGTGAAGCTGGCGACATACCGACTAGCTGATTTGAAATGCATAGACTGCGATGAGATTTCAAACGATTTTCCTAGTCTGTTACGgcatattaaaaacaaacacacgGATTATTGCTTCCAATGTGATAACTGTAATAAAATGTACAGCAATAAGCGAATATTAGCGAAACACATCAGAACTTCGCACAAGATTGTTTATAACTGTCCAAAATGCTCTCTGGCCTTTAACTCCTCCCGAAATCTTGCTATGCACAAAACGGAGCATCTCCCGCGTTGCAACGTCTGCTTTATAACATTTAAATGTGACCTGCAGCTACTGAGGCACATAAATAACAAACACGAATTAGAAAACGATTTGCAGTGTAGTCTCTGTCATAAACTGTTCAAAACTTCGGCTGGCTTCTTGAAACATACAACGAAATGCCACGCACTGCAGCTGAAAGACGAAGAACCAAAAACTACGGAATGCAATGCGCTACAGCTAAAAGAACCAGCTGAAGAAGTTAAAGACGGAAATGTCTACGGAACCATCAAAAAACTCAGAACTAGCATcgccaatattataaatatgacaaATGCAATTCCTTTTAATTACCATCGCAGCAAATTTGCATGTTTTTACTGCACAAAAGATTTCATTTCATGCAATGATATGAGACTGCATACAACAACTGTACACCCTATCTGTGAGACGTCGATTCGCGGTTTGAAAATGCGCGGTAGAGCCTTGGGTGTTAAAATCAAAGTGGATATATCTTCACTTAGCTGCAAGGTGTGTTTCGTAAACTTCGATGATCTCACCACCGCGGTAGCTCACATCGAATCTGAACACGAAACAATCGTCAAAGAAGCCTATGATATGTTAAGGCCGTTTAAGCTTATACATGACAAATTCCCTTGCTTGTTTTGCGATAGCGTGTTTAGATATTTCGGTTTGCTGTTGCAGCATTTTAACGCCAATCActctgtaaatagatatatttGCAATATCTGTGGTAAAGGTTTTCCTGCTTATGCGAACTTGAATGGGCATATAAGGAAGACTCACGCCACTGGTGCATTCAATTGTAGTATTTGCGGTGTGATATACTCCTCCAAAGAAAGCATTACAATGCACATGGGTAATGTTCACGGCAGCAAGGTGGTTCCTTGTCGGTACTGCTCTGAAAAGTTCGTCTCGCGGTATACTATGATGAAGCATGTAGTGATTGATCATAACGGGGGACATAAATGCTCTTACTGCGGCCAATCGTTTATAAAGTACTCGATTATGCAGAAGCATGTTAGGAGACTGCATCTGCATGAAAAGAATGTTAATTatGAAACGCCCGCCCCCCTGGTCGACCGAATAACGTCAGAACGGAGAAGGAAAAACATGAAAACTATATTCGATAACACGACTATCATACCGTTCAAATGGCGAGGAGGATCTCATATCTGTTTTTACTGTAGCACTCGTATAGGAGATTACGCAGAGTTCAGAAAGCATACAAAAGCTCACGGACCGTGTAACACTAAGAACCTCGCCATGAAAAGGTTAAAAGGCAATGGCCTTACGATTAGCCTAGATGTTTCCGAAATCACTTGCGAACTATGCGAGCAACGATTCAAAAGCTTAGAAGTTATCGTAGAGCATTTGGTAAATGAACATAAACTGTTTTATGATAAGGATATTTACAGCGAAATTTTGGAGTACAGATTGGTGGACTTTCGTTGCACGCATTGTGACAGTCAGTTTGATGCGTTCAGACATCTCGCTTCTCACGTCAATAAGCATCATTTGCTTAACAGATTCGATTGCCATCATTGTGGGCGGAAGTTTAATAAGAAAAGGGATATAGCGGGTCATTTGACTACATACCACCGGTTGGGAGGTTTCGTTTGCAAACAATGTGGTTTGGAGTGTAAAACGCGCTTTGAGTTGCGAAAGCATGCAGCATACTCTCATATAACACGGTGTCATGTTTGCGGAAAGAACTTCATTTATCTGGATAAGCTGTTGAAGCATCTTAAGCTTGAACATCCGGAAGATGATACTAAAACGTGTGGCTATTGCATGAAGGAGCTTAATTCCACTTTGGGTTTGAAACAGCACTTGTACAGATGCAAAGTGAGATTGCTTGCGCAACCGGATATAGATACCGCATCTGTATCGGACAATCATGTTGTTAGCACGTCGAGGACCCATGAACAGATTGTAAGAATTCGGCAGAACATTCAATGCGTCCTTAACATGTCAACGGCTGTTCCTTTCAAATTTAGAGTGAAATTTACTTGCTTCTACTGCTCCCTAAAGTTTGACGACTACGAAGTTCTGAAACAGCACACTCGTGCGGAGCACACAGTATGTGAAATCACAAGCAAGTCAATGAAAACGTGTAAGGGTAAACGCACGTTCGTCAGAGTCGATATAGCAGAGCTTGCTTGCAAATTATGCTCTGCTCCGATGCCCGATTTGGAGCAGTTTATCGACCACGCGATCTCCGAACACAATGCGGACTACGACAAAACCATCAGCCTCAAAACTTGTTTTGAGCCGTACCGTTTACTCAAAGGCAATATTCCTTGTTTGGAATGCCCGAAAGTCTTCCGTTATTTGAACACCATGCTGAGGCATTTCAACTTGGAGCACAGTAACAACAATGTGATTTGTGATTACTGCGGCCGCGGTTTCCGCAGTACTACCAACCTGAAAATGCATCTACAGAACAACCATACAGGTTCGTGTGAATGCAAGATTTGCAACGCCAAATTTAGAAATCACTCTGTACTGATCCGTCATATGGCAAAGACCCACAACGTGAAGACATTCAAGTGTCCAAAATGTACTGAGATGTTCGAATCTGCGTATCAGAAACAGTTGCACTTGATCAAAGTTCACGGGATTGGGCATAAATGTGAATTCTGTGGGAAAATGTTTACGAAACACTCGTTTATGGATATTCACGTAAGACGGACGCATTTGAAGGAGAAGAACGTTGCTTGCTCCGTTTGTAATGATAAGTTCTTTGATAATCACTTGCTGAGAATGCATATGGTGAAGCATGATGGTGAACGGAAGTTTAAATGTGAGCTGTGTGGGAAAGCCTTTCTGAGGCAGAAGAATTTGCGAACTCACATGGACACGCATAAGAAATATGGTTTTGTTCAGTAA
- Protein Sequence
- MRLNIVNLTCKICQLTFTDLDPAIDHLTTTHQLAYDKSFPDVIETFKLHNDSYTCHICGEEFVFFKILVRHIRDIHTESEITCDLCGKRFVRHAAYLVHKEYAHGPGFTCKACGKDFFSSFKLKAHVAKEHEGFKFKCSECTEEFTTPYQRKKHVITAHKTNAASFSCPHCEKLFTCASHRHYHVRKVHLKERNAKCPVCQEEVFDSNRLKVHMTKHLRERNHVCDIYAKPKPERTKQSFKECKLRNLQTLINNTSVMPFKYRNKYYICYFCGENKDTYFGLKKHTQTHIPCSKTELNLPEYRTEMKIDVSVISCNICSEHYPTIKKLLTHLQMKHKLWYREDLSVKLATYRLADLKCIDCDEISNDFPSLLRHIKNKHTDYCFQCDNCNKMYSNKRILAKHIRTSHKIVYNCPKCSLAFNSSRNLAMHKTEHLPRCNVCFITFKCDLQLLRHINNKHELENDLQCSLCHKLFKTSAGFLKHTTKCHALQLKDEEPKTTECNALQLKEPAEEVKDGNVYGTIKKLRTSIANIINMTNAIPFNYHRSKFACFYCTKDFISCNDMRLHTTTVHPICETSIRGLKMRGRALGVKIKVDISSLSCKVCFVNFDDLTTAVAHIESEHETIVKEAYDMLRPFKLIHDKFPCLFCDSVFRYFGLLLQHFNANHSVNRYICNICGKGFPAYANLNGHIRKTHATGAFNCSICGVIYSSKESITMHMGNVHGSKVVPCRYCSEKFVSRYTMMKHVVIDHNGGHKCSYCGQSFIKYSIMQKHVRRLHLHEKNVNYETPAPLVDRITSERRRKNMKTIFDNTTIIPFKWRGGSHICFYCSTRIGDYAEFRKHTKAHGPCNTKNLAMKRLKGNGLTISLDVSEITCELCEQRFKSLEVIVEHLVNEHKLFYDKDIYSEILEYRLVDFRCTHCDSQFDAFRHLASHVNKHHLLNRFDCHHCGRKFNKKRDIAGHLTTYHRLGGFVCKQCGLECKTRFELRKHAAYSHITRCHVCGKNFIYLDKLLKHLKLEHPEDDTKTCGYCMKELNSTLGLKQHLYRCKVRLLAQPDIDTASVSDNHVVSTSRTHEQIVRIRQNIQCVLNMSTAVPFKFRVKFTCFYCSLKFDDYEVLKQHTRAEHTVCEITSKSMKTCKGKRTFVRVDIAELACKLCSAPMPDLEQFIDHAISEHNADYDKTISLKTCFEPYRLLKGNIPCLECPKVFRYLNTMLRHFNLEHSNNNVICDYCGRGFRSTTNLKMHLQNNHTGSCECKICNAKFRNHSVLIRHMAKTHNVKTFKCPKCTEMFESAYQKQLHLIKVHGIGHKCEFCGKMFTKHSFMDIHVRRTHLKEKNVACSVCNDKFFDNHLLRMHMVKHDGERKFKCELCGKAFLRQKNLRTHMDTHKKYGFVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -