Basic Information

Insect: Horisme vitalbata
Gene Symbol: SGF29
Assembly: GCA_951804965.1
Location: OX638104.1:11833420-11843667[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.3e-07 3.3e-05 24.9 3.7 1 23 422 444 422 444 0.98

2 11 8.8e-07 6.9e-05 23.9 0.6 1 23 450 472 450 472 0.98

3 11 4e-06 0.00031 21.9 0.1 3 23 480 500 478 500 0.97

4 11 1.1e-05 0.00086 20.5 2.8 1 23 506 528 506 528 0.98

5 11 5.2e-09 4.1e-07 30.9 2.8 1 23 534 556 534 556 0.98

6 11 2.2e-06 0.00017 22.7 0.4 1 23 562 584 562 584 0.98

7 11 0.0001 0.0081 17.4 1.0 1 23 590 612 590 612 0.98

8 11 1.2e-07 9.6e-06 26.6 2.0 1 23 618 640 618 640 0.99

9 11 4.3e-09 3.4e-07 31.2 1.9 1 23 646 668 646 668 0.99

10 11 2.5e-07 1.9e-05 25.7 0.5 1 23 674 696 674 696 0.99

11 11 1.1e-05 0.00085 20.5 4.3 1 23 702 724 702 724 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.3e-07	3.3e-05	24.9	3.7	1	23	422	444	422	444	0.98
2	11	8.8e-07	6.9e-05	23.9	0.6	1	23	450	472	450	472	0.98
3	11	4e-06	0.00031	21.9	0.1	3	23	480	500	478	500	0.97
4	11	1.1e-05	0.00086	20.5	2.8	1	23	506	528	506	528	0.98
5	11	5.2e-09	4.1e-07	30.9	2.8	1	23	534	556	534	556	0.98
6	11	2.2e-06	0.00017	22.7	0.4	1	23	562	584	562	584	0.98
7	11	0.0001	0.0081	17.4	1.0	1	23	590	612	590	612	0.98
8	11	1.2e-07	9.6e-06	26.6	2.0	1	23	618	640	618	640	0.99
9	11	4.3e-09	3.4e-07	31.2	1.9	1	23	646	668	646	668	0.99
10	11	2.5e-07	1.9e-05	25.7	0.5	1	23	674	696	674	696	0.99
11	11	1.1e-05	0.00085	20.5	4.3	1	23	702	724	702	724	0.99

Sequence Information

Coding Sequence: ATGCCTCTCACGGCTGATGTCGCCGCACAGCAAGTACAGGAGCGCTTGAGATCTCTTCATCGATTGGTGTATGATATTGAAGGAGAGAGGGCTCGCAATGAGCAATGCATTGACTCTATACTCCGAGTTGAAAAAGCTGGAGACTCGCCTCAGAGTGCAGAAGATTCCTCCAGCTCTTCACAACAGCAGGCACAATTGAAGAATTTATACAAAGCAGGACTGACTGCGGCAGAACAGGAAGAAAGATTATTACGTGCAGCACTCTCGCGAATTTACGAGATTCGCACCATCAAGAATGAGAGGAGGATCCAGGCCCGCCACGCTGGCAACAAGGAGACGATCGGCTGCGGTGCGCTTATGAAGATGCTGTTATCTGCCGCTCAAACGCTTCCCCTCCACGTGGGAAGGGTCGGGGAACGGGCGCCTCAGCTCTGCGGCGCGGTGCCAGCCGACGCGGGTCACGTGGCGCGCGCTGGCGACGCCGTCGCCGCACTAGTCAGGGTCTCTGACAAGGAGGAGAATTGGATCCTAGCCGAGGTTGTGAGCTGGCTTCCCGCTCAAGGTAAATACGAGGTGGATGACATAGATGAGGAGCAGAAGAACCGACATGTGCTGAGTAAGCGGCGCGTGGTACCGCTGCCACTGATGCGAGCAGACCCTAGGACGGACGAGCATGCCTTATTCCCTAAGGGAGCCGTTGTCATGGCCCTTTACCCGCAGACTACGTGTTTCTACCGCGCCGTGGTAAACAGACTGCCCGCCAGCGCAGCTGACCCTTATGAAGTACTGTTTGAGGTCATACAAGAAACAGTTAATAAGCTTAACTTTGAAATAAATCAGAACATAATATTGAACGCTCATTTTACATCTTCAAGTGATTCACTTAGAGCTACTCAAATACCGCTGAAGGAAGGAGCTGGAAGCGATCCAGCTAATGACATTGAATTATTTTCATTCAATGATTATTCAAATAGTGATATAGAAGAACCTACAACACTTCAtaagataaaaattataaataatgacatATTGGAGAAGAAAACCTCTACACAATCATCTTTGAACCATCCCTCAACTAGTAAAAGTGGTCAAGTATGTACAGAGGAAGAAGGCAATGAAGTTGATCCCAGCACACTCGTTGAAATAGAAATAGGCGGAgtattgataaaaaaagatttacaaaaaaaggaaaatattttaacaaacaatACAATGAATGTAAATGAATCTGCAAAACAAACAGATCTCAGTATAATAAAGCCCTTTACTTGTGATCAATGCAATAAGTCTTTTGCCCGAACCAGTCACTTGCAGACACATATGAAAATTCATACTGGAATCAAACCGTATGTTTGCAATCAGTGTGGCAAGTCGTTCTATGAAATGGGTAATCTGCAAAGACATCTCAAAGTACACACTGGTGTAAAGACACTTGCCTGCCCACAGTGTGATAAGACTTTCTATGAGAGTGGTGGCTTGCAAAGACACTTGAGAGTCCATACGGGAGAAAAAGCATATTCCTGCAGTCAATGTGAAAAAACTTACTCTACAAGTCACGGTTTAAAGAATCATATGAGCGTTCACACTGGAATAAAACCCTATAACTGCAATCATTGTGGTAAATCTTTCACATCTAGCAGTAACTTGCAATCACATATAAGAATACACACTGGAGTGAGACCGTACGCCTGCAATTTATGCGAGAAGTCATTTACTGAAAGTGGTGGCTTGCGGAAACACCAAAGAGTCCATACAGGAGTCAAACTTTATGCTTGCAATCTATGTGAAAAGTCTTACGCTTGCAGCGCCAATTTGCAAAATCATATGAGAGTTCATACTGGAGAAAACCCATATGTTTGCAATACATGTAAAAAGTCATTCTCATCCAATGGTAATTTGCAAACACACTTGAAAACCCACACTGGAATAAAACCATATACCTGTAATGAATGCAGTAAATCATTCACTACTAGCAGTAATTTGCAATCTCACATGAGAATTCACTCAGGAGAAAAGCCATATGTATGTAATGAATGCAAGAAATCTTTCACTGAGAGTGGAGCTCTGCAGAAGCATCTAAGAGTACACACTGGTGCTAGGCCATATAAATGCAAGCAGTGTGAAAAAGCATACTCTACAAGTCATGGATTGAAAAAGCATTTGAAAAGTCATATAGCTGAACCAAGATTTTACGAGATAAATATTACTGTTAAACAAGAAACGGTAGATCAGGAAGAAGAATAG
Protein Sequence: MPLTADVAAQQVQERLRSLHRLVYDIEGERARNEQCIDSILRVEKAGDSPQSAEDSSSSSQQQAQLKNLYKAGLTAAEQEERLLRAALSRIYEIRTIKNERRIQARHAGNKETIGCGALMKMLLSAAQTLPLHVGRVGERAPQLCGAVPADAGHVARAGDAVAALVRVSDKEENWILAEVVSWLPAQGKYEVDDIDEEQKNRHVLSKRRVVPLPLMRADPRTDEHALFPKGAVVMALYPQTTCFYRAVVNRLPASAADPYEVLFEVIQETVNKLNFEINQNIILNAHFTSSSDSLRATQIPLKEGAGSDPANDIELFSFNDYSNSDIEEPTTLHKIKIINNDILEKKTSTQSSLNHPSTSKSGQVCTEEEGNEVDPSTLVEIEIGGVLIKKDLQKKENILTNNTMNVNESAKQTDLSIIKPFTCDQCNKSFARTSHLQTHMKIHTGIKPYVCNQCGKSFYEMGNLQRHLKVHTGVKTLACPQCDKTFYESGGLQRHLRVHTGEKAYSCSQCEKTYSTSHGLKNHMSVHTGIKPYNCNHCGKSFTSSSNLQSHIRIHTGVRPYACNLCEKSFTESGGLRKHQRVHTGVKLYACNLCEKSYACSANLQNHMRVHTGENPYVCNTCKKSFSSNGNLQTHLKTHTGIKPYTCNECSKSFTTSSNLQSHMRIHSGEKPYVCNECKKSFTESGALQKHLRVHTGARPYKCKQCEKAYSTSHGLKKHLKSHIAEPRFYEINITVKQETVDQEEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -