Basic Information

Insect: Horisme vitalbata
Gene Symbol: -
Assembly: GCA_951804965.1
Location: OX638095.1:19317875-19320370[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0081 0.63 11.5 2.0 3 23 177 197 175 197 0.96

2 16 5.1e-05 0.004 18.4 2.9 1 23 203 226 203 226 0.92

3 16 0.096 7.5 8.1 2.2 2 23 234 255 233 255 0.96

4 16 0.00012 0.0091 17.2 0.5 1 23 262 284 262 284 0.96

5 16 5.2e-05 0.0041 18.3 2.3 1 23 293 315 293 315 0.97

6 16 8.3e-08 6.5e-06 27.2 2.6 1 23 321 343 321 343 0.99

7 16 1.7e-05 0.0013 19.9 2.5 1 23 349 371 349 371 0.98

8 16 3.3e-06 0.00026 22.1 4.1 1 23 377 399 377 399 0.99

9 16 0.00011 0.0087 17.3 2.0 1 23 405 427 405 427 0.97

10 16 1.3e-06 9.8e-05 23.5 0.3 1 23 433 455 433 455 0.98

11 16 1.8e-05 0.0014 19.8 10.0 1 23 461 483 461 483 0.98

12 16 1.2e-06 9e-05 23.6 0.2 1 23 489 511 489 511 0.98

13 16 8.2e-06 0.00064 20.9 1.3 1 23 517 539 517 539 0.97

14 16 1.1e-06 8.8e-05 23.6 0.6 1 23 545 568 545 568 0.96

15 16 8e-05 0.0062 17.8 0.6 1 23 574 596 574 596 0.97

16 16 0.00052 0.041 15.2 3.0 1 23 602 625 602 625 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0081	0.63	11.5	2.0	3	23	177	197	175	197	0.96
2	16	5.1e-05	0.004	18.4	2.9	1	23	203	226	203	226	0.92
3	16	0.096	7.5	8.1	2.2	2	23	234	255	233	255	0.96
4	16	0.00012	0.0091	17.2	0.5	1	23	262	284	262	284	0.96
5	16	5.2e-05	0.0041	18.3	2.3	1	23	293	315	293	315	0.97
6	16	8.3e-08	6.5e-06	27.2	2.6	1	23	321	343	321	343	0.99
7	16	1.7e-05	0.0013	19.9	2.5	1	23	349	371	349	371	0.98
8	16	3.3e-06	0.00026	22.1	4.1	1	23	377	399	377	399	0.99
9	16	0.00011	0.0087	17.3	2.0	1	23	405	427	405	427	0.97
10	16	1.3e-06	9.8e-05	23.5	0.3	1	23	433	455	433	455	0.98
11	16	1.8e-05	0.0014	19.8	10.0	1	23	461	483	461	483	0.98
12	16	1.2e-06	9e-05	23.6	0.2	1	23	489	511	489	511	0.98
13	16	8.2e-06	0.00064	20.9	1.3	1	23	517	539	517	539	0.97
14	16	1.1e-06	8.8e-05	23.6	0.6	1	23	545	568	545	568	0.96
15	16	8e-05	0.0062	17.8	0.6	1	23	574	596	574	596	0.97
16	16	0.00052	0.041	15.2	3.0	1	23	602	625	602	625	0.97

Sequence Information

Coding Sequence: ATGGGCTGCCAGAAACAGGAAGCTATCTGCAGACAAACTTTGAATTTCATCACCATAATCTCAGCCCGAAATTCCCTTAGTTTTTCCCAACGTCTTCTGCCCTGTGCCTCTATCATCCAGTTCACACATGATTCATCCATCTTATTGAATGCTGGGAATTCGTACAACTTGACTATTACCACCATTCAGAAGACTTCCTCTGGTGATCCTGAAGATTTGGGCGCTGTGAAGGAGGAACAGCCAGATTCCCCTGTCTATTTAGATGTGTCTGATGATTTCAATGAGGATTCTAAGAAACTTGTTAAAGAAGAAGACGAACTTAGTTCCAACAAGCACACATGGGACAGTAAAGATAAGAATTCCAtagtaaaaatatcaaaaactgaCCGGAAAGAAGCTAATTCAGAGACAAATACTGTAATCTACGTGAAAAATGAAGATAGAGACAAAACTACTGACAGCGAAAACACAAACGAGTTTGCGAAACAACCTTTTACAATAACGCCTACTCAAGAAGATTATTTGTTCTGCAATATATGCAACAAGAAACATGTCACAGAAAAAGCCTTAAACCAGCACATGAAGGTCCATGATCAAAATCGATCTTTTGTATGTGAGATATGCGAATATCGCTTCAACACAAAATCTCACCTAAAGACACACAAAGATAATTTACACAGAACTGAAAACGAAGCAGTCTCATGTACAGTATGCCATAAAGTCATGAACAGTAGACAAATCTTGAATAGACACATGAAGAATCACTTAGAGAGGCCAAAGAAATACGCATGCGACAGATGCAACTTAAAATTTAGCAATTGGAGCGTCTTGAAAAGACACAAGGCGATCCACACAGAAGATATGTCAACGAAGCCACATTCCTGCCAAGTTTGCGGTAAGACCTTTTCCATTATCTACTATCTAAAAAGTCACATGAAACTTCACACAGGTGAAAAACCATACACTTGTGAAAGATGTGGTAAAGCATTTACACTGAACAGCCATTTGAAGATCCACATGCGAACTCACACAGGGGAAAAACCATACGCTTGTAACAAATGTGGCAAACAATTCTCTAGCCTAGCTCACATCAAATACCATATGAAAATGCACACAGGTGAGAAAGGTTACACATGCGATATCTGCCATAAATCATTCTCAGAAAGTAGCCACTGGAAGAGTCATATTAAAATCCATTCGGGCGAAAAACCATTCGCATGTGATATGTGTGATAAGAAATTTATAGGGCACACGAACTTGAAACTGCATAAGAGGATCCATACGGGGGTTAAGCCGCATGTATGCGATGTATGTGGGAAGACTTTTGCTCAGAAGTCTGTGTTGGTAGTGCATGTTAGGACTCATACCGGGGAGAGACCGTTCGCATGTCATCACTGCGGGAAAACATTCACAATGTCGACACATCTCAGGCATCATGTGCGAACGCACACGGGCGAAAAACCATACGCATGTGAGATATGCGGAAAAACGTTTGTTGAAAACGGCCGACTGAAAAGGCATCTGAGAATTCACACCGGTGAAAAACCGTACGCATGTCCTTTGTGTGACAAATCATTTGCTGATTGCACAAATATGAAAAATCATCAAGTCACACACACGGGTGAGAAACCTTTCGCTTGTGATCGTTGTGGGAAAACTTATACGCAGCAAGGTACGTTGAATAAACACATAAAAAGTGTACATCTCAATCAGAAACCTTATGCTTGTGATATGTGTCCTAAGTCATACACTAAGCGACAGGCGCTGACTTCCCATACCCTGTCTCATACGGGAGAAAGGCCGTTTAGCTGTGAAAAGTGCAGTAAAACATTCACACGGTATCAGATTCTGAAACGacatattttaaaaactcaTGGTGAAAATAAGTATGATTTAAAAATTGATAAAGCcttgtctgatgatgatgatgatacagcgATTGTAGGTGACTTGGTTggttga
Protein Sequence: MGCQKQEAICRQTLNFITIISARNSLSFSQRLLPCASIIQFTHDSSILLNAGNSYNLTITTIQKTSSGDPEDLGAVKEEQPDSPVYLDVSDDFNEDSKKLVKEEDELSSNKHTWDSKDKNSIVKISKTDRKEANSETNTVIYVKNEDRDKTTDSENTNEFAKQPFTITPTQEDYLFCNICNKKHVTEKALNQHMKVHDQNRSFVCEICEYRFNTKSHLKTHKDNLHRTENEAVSCTVCHKVMNSRQILNRHMKNHLERPKKYACDRCNLKFSNWSVLKRHKAIHTEDMSTKPHSCQVCGKTFSIIYYLKSHMKLHTGEKPYTCERCGKAFTLNSHLKIHMRTHTGEKPYACNKCGKQFSSLAHIKYHMKMHTGEKGYTCDICHKSFSESSHWKSHIKIHSGEKPFACDMCDKKFIGHTNLKLHKRIHTGVKPHVCDVCGKTFAQKSVLVVHVRTHTGERPFACHHCGKTFTMSTHLRHHVRTHTGEKPYACEICGKTFVENGRLKRHLRIHTGEKPYACPLCDKSFADCTNMKNHQVTHTGEKPFACDRCGKTYTQQGTLNKHIKSVHLNQKPYACDMCPKSYTKRQALTSHTLSHTGERPFSCEKCSKTFTRYQILKRHILKTHGENKYDLKIDKALSDDDDDTAIVGDLVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -