Hvit022252.1
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- -
- Assembly
- GCA_951804965.1
- Location
- OX638101.1:14873743-14875854[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-07 7.7e-05 23.2 0.0 17 44 1 28 1 29 0.95 2 2 7.6 3.9e+03 -1.5 0.0 27 44 84 102 84 102 0.90
Sequence Information
- Coding Sequence
- atggGCATAAGAGAAGCCTGTCGGGTTTATGGCGTGCCGAAAACAACAGTGCACGATCGACTCTCTGGGAAAGTTTCAAAAAAACCTAAAGTAGGCCCAGACCCTGTTTTAGGTCTTGAAGGTGAAGAAAAGGTTAAAAACTGGGTTTTGGATATGGCTAGATGTGGGTTCCCTATTTATAAGAAAGATCTACTCGAGAGTGTGTCTAAGATAATTCGAGACAGTGGAATTAAAAACCCTTTTAAGGATGGTATTCCCGGAGACACCTGGTACCATGCGTTTTTGAGGCGTCACCCTGATGTAAGTGTTCGTCAACCGGAAGGGATTAATAATGCTAGAGCAGTAGTGACGGAGACTCGTATAAAATGCTGGTTTAATGACTTGAGGGAGTATATAAAATCTATTAATGCATTGGATGTATTTGAAGACCCAGATAGGATTTTCAACGGTGACGAGACAGGATTTTCTCTGTGCCCAAAAAGTGGTAAAGTTTTAGGGCCAAAAGGCTACAAGAACCTCTATATGATTAAAAAGAATAACGAAAAGGAAAATATAACCGTACTGCTGGTCTTTACAGCCAGTGGTAAGATTTGTCCTCCTTTAGTGGTATTTCCATATATAAGACCACCAAAAGCTCTTGTTGATAGTATGCCAGAATCTTGGGTACTTGGTAGATCAGAGAGTGGTTGGATGAGAAGTGATGTGTTCTATGAATATGTCTGCAATAGTTTTAATACATGGGTGATAGAACAGGGTATTAGAAAACCTATTATTCTTTTCATTGACGGGCACAAGTCACATATGACCGTATCCCTGAGCCAATTCTGTGAAGAAAATGGAATCATTCTGTATGCCCTACCAGCCAACACTACACATATTCTTCAGCCAGCTGATGTGAGTGTTTTTAAGCCACTTAAGCAAGAGTGGAAAAATACAATAAGGAACTGGCAAGCTcgggaacaaaatataaatcagaccataacaaaaataaacttttgcaAGATTTTAAACGAGACTTTGACAACTATTGACCTAAAAGAAGCTATAGTAAATGGATTCAGAAAATGTGGATTATATCCTTTGAACGAATATGCCGTGGATTACACAAAATGTGTTAGCGACACAATACGCAAAATTCGAAATTCAACTCAAAACAAAAAGACTCTATCGTCAAAGGACTATGACACTGCGATAAATGTAATTTCGTTTCTGCGACAAAACATATCAAAGCACAACATCGACACAGACATAATTTTAAACGAAATTAATAAGGCTAAAGCAAATTTTCTATTAAACCGCCGTTCTAAATCCAAGACCCCGCGAAATTCTGCATCTTCAAACCTGAGCAATAGTATACTTATTGAAGAAATTGCAGTTGAAGCTCACACTGCCGATTCCGCGTCCACACCAGAAATTTTAGATTTCGAGCCTAGGACCTTGATACAAGCATCGGATACACTTTTATCTCAAGACATCTTGACTGCGGAAGTATCAACAGATGCAACGCTACAAAACCTCATTAACTTAAATGACGAAAATATAAGTTTTCCCGATGCTGGATCATTTATATCTTTGAACAGCATATCAATTATGCCCTTCGATGAAATAGAAATCAGTGAATCGAATCATCCATCTGGCGCTGAAAATATTCATTCTGTCGTAGATGATATCACTCTTGATGCTGCTTTTGCAAAACACTTGCAATTTCCCGAACCATCAGCGccaaaagagaaaaacaaaggTCCTAAATTGCCGAGTGCAGTTTCTTCGAGCTCGTGGaggaattattataaaaagaaggatgaagataaagaaaaccttataaaagaaaagaatctaaaaaaaaagaaaagagcaGAGGTAaaggaaagaaaagaaaaagagaagcaaaacaaaaagaagaaaattgcAGTCCAGAAGAGCACCCTTAAAAAGTCTTCACAGTGTAGCGAATGCCATGAAGATTTAATAAGCGATGTAGAAGAGGAAGCAGAAAAAAATATCGGCTGCGACAGATGCGTTCGCTGGTACCATTTAAAATGCACAATTTTAAAGGATTGTCCTTATATAGAAGCGGCGTCATCCGATTATATATGTCAGATGTGTGAATGA
- Protein Sequence
- MGIREACRVYGVPKTTVHDRLSGKVSKKPKVGPDPVLGLEGEEKVKNWVLDMARCGFPIYKKDLLESVSKIIRDSGIKNPFKDGIPGDTWYHAFLRRHPDVSVRQPEGINNARAVVTETRIKCWFNDLREYIKSINALDVFEDPDRIFNGDETGFSLCPKSGKVLGPKGYKNLYMIKKNNEKENITVLLVFTASGKICPPLVVFPYIRPPKALVDSMPESWVLGRSESGWMRSDVFYEYVCNSFNTWVIEQGIRKPIILFIDGHKSHMTVSLSQFCEENGIILYALPANTTHILQPADVSVFKPLKQEWKNTIRNWQAREQNINQTITKINFCKILNETLTTIDLKEAIVNGFRKCGLYPLNEYAVDYTKCVSDTIRKIRNSTQNKKTLSSKDYDTAINVISFLRQNISKHNIDTDIILNEINKAKANFLLNRRSKSKTPRNSASSNLSNSILIEEIAVEAHTADSASTPEILDFEPRTLIQASDTLLSQDILTAEVSTDATLQNLINLNDENISFPDAGSFISLNSISIMPFDEIEISESNHPSGAENIHSVVDDITLDAAFAKHLQFPEPSAPKEKNKGPKLPSAVSSSSWRNYYKKKDEDKENLIKEKNLKKKKRAEVKERKEKEKQNKKKKIAVQKSTLKKSSQCSECHEDLISDVEEEAEKNIGCDRCVRWYHLKCTILKDCPYIEAASSDYICQMCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00810961;
- 90% Identity
- iTF_00810961;
- 80% Identity
- iTF_00810961;