Basic Information

Gene Symbol
-
Assembly
GCA_951804965.1
Location
OX638108.1:2939256-2956353[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-13 3.8e-10 40.9 0.1 2 89 204 278 203 278 0.92

Sequence Information

Coding Sequence
ATGGTCGCTTCTCCAGCCCCAGCGGAACAAGGAGATCCAGGATGCGGATCGGAGGGGAGGTGGATTGTGGCCGTGAGGGGACGGGAGGAGGTTGAAAACATTGAGAAGGGACGGGAGGATGTTGAAAACGTTGAGAGGGGACGGGAGGATGTTGAAAACGTTGAGAGGGGACGGGAGGAGGTTGAAAACATTGAGAAGGGACGGGAGGATGTTGAAAACGTTGAGAGGGGAGTGGAGAGTCGACGGATGGAGGGACACAACCACCAGCGCCTGTGTCAGTGTACAATATGCGGCAAAACTATCAAAGCAAACATAACCCGCCACTACAGGCAGAGACATGGTAACTTTGCCCAGGGGCTCACCACAGATCACCACCGATACCCTCAGTGGTTCTATTTTTTTACTAGAGAACGCAAACCGGTGTGCCCTCAGGAACACAGGCCGCCGAGGAGTATGCTCGAGGGCGTTTCTGGGGTTGATTTTGACTTCGTATACCCGCAGAGTGAGGCTGATacaCCCCCTTCTGGGCCCCGCCGCCTTTCCCTCCGAAACGGCCCCGAGAAGACCAGCTCCGTAGAGGAAATGGAACGGAAGTACCTCGCAGATGATGAGAGGGATTTCCTCCGCCGACTGAAGCATTTCTACAAGGATCGGAATGAATCGCTCAGCAAAGCTATTACACTCAAACACATTACATTGAATGCTGTTTACGCCATAGTGACGTCACGCGGCGGCTACGACGCTGTGTGTCGACACAAGCTATGGCGGGTTCTGTTCACGGACCAACCTGTCTACACACGGAGACATTACGAACGgtatCTGCTCGCGTTCGAGCACCATGAGCGTAGAAACGGCACAAAAGCGAACGGCCTCATCCAACCCATAGACACGATCCACGTCCAAGACTCGCCTCTACGAGAGGACAAACCCCATTCCCCGCTCAAGCACATAGACTGCGAGACAGGTGAAATCAAAGAAGAAAGCATGAACCTGACCTCCAAACCAGCCTCCGAGCTGAACCTCGAGTTCCTAGCTTCTCTCCCGAAGGAGGAGCAGCCTAAACTGGCTGTGAAGTCGGTGGATTCTCTCATGGAGAAACCTCACTGGATGGCACAAGACAAAGGTGCGCATTTCGCAGGCGACGTGACGCAGATGCATCCCCTCCCCTCGCCCTACCCCCCCTCCGGAGTCAATGGACATGCGCACAATCTCACTACCTTCGAACAGAAGCCGCATCGTCCAGCTGGTCGAAGTTCGCTTCGCGCCGTGAGAGTCAAACCTGCGAGATCCAACACGCAGCCCGCCACCGCGCCTAACAcacCGCCGACTAGCTACCCCCTGCTGGCGGAGTCCCTCTCGTCGTCGAGCTCGCCCCCCGCGCCCCCCAGCTCGGCGCCCCCCGCCCCCGTCACCAACTTCGGCATTCACCACCCGCCGCCGCTACCTCCGCCAACCAACAATAGCGACGACGAGATCGTAGAGGTCCCATACAAACCAAAGACGCCAGAAATAATCGACCTTGACGAATACCCCGAGACAGACAGTCCAGACTCATCCAAGAAGAAACGGCTGGACATCCTCAAGGAGCGAGGGTTGGAAGTCACCCCCCTGCCCACCCCCTGGCCTGCCCCCATCACCCCCGTGCTCACCCCCAACCCCATACTGCTGAACCCAGCAGTGCAGCAGCAGATCATCGCGTCACAGCTGTACGGGTATTACACGCCGCCAGTTGTACCCGCTGCTTACCCTAATGGCGTTCAACCCCCTAAgGTTATTCAAGCAACATCAATCTTCGGATCTTCGAGCCCCGAGAAAACAGTCTACGGCAACCCTAAAGACCCCTTCATGCCACCCCCACACGTCTTACACGGCGCCCCGATCAAACCCCACAGGGTGGCAGTCCAACCACCCTCCAACCCTCAAGATATACTCGACCTAACCTGCAAGTTAACCAAACCAGCAGTAGAAATTGTAAGAGTACCCACCGCACCGTCCCCAAAAACCGCAACACCAAAAAACTACTCCATCGTCGATGGAAAAGCGGTTGTAGGTTCAAATCTTGAGATAACCTTGGTAAATAAAGCTCAAAGCCCGAAAAAGGATCAAAACCGACCCCAGAAAAGGTCATCCAACGGCAAATTCCTAGCAAAAACCCCCACGAAAGAGCAAAAGGTTCAGAAAAAACAGGCTATTGTTGTACCCAGTTATCAAGTTAGAGATGATCCTTCGCCTACTGGCTCTAATAACTCCACAAGTTCTCGTGAAAGTCAGAAGGAGCAGAAACCGATGTCCTCTTTCCTCGATCCTTATATGGCGTTGTACAGTTTGGCGGGTCAAATGGACCCCAGAATGATGGGGGGTCAGTTAGACCCTAGACAGGTCGCGGCGTACAGAGAGGCAATGGTTAACCAGTTTAGGGGTTATTCTCATTTGCTGAATATGGGTGTAGCTAATCCTACCACTAAGAATTGA
Protein Sequence
MVASPAPAEQGDPGCGSEGRWIVAVRGREEVENIEKGREDVENVERGREDVENVERGREEVENIEKGREDVENVERGVESRRMEGHNHQRLCQCTICGKTIKANITRHYRQRHGNFAQGLTTDHHRYPQWFYFFTRERKPVCPQEHRPPRSMLEGVSGVDFDFVYPQSEADTPPSGPRRLSLRNGPEKTSSVEEMERKYLADDERDFLRRLKHFYKDRNESLSKAITLKHITLNAVYAIVTSRGGYDAVCRHKLWRVLFTDQPVYTRRHYERYLLAFEHHERRNGTKANGLIQPIDTIHVQDSPLREDKPHSPLKHIDCETGEIKEESMNLTSKPASELNLEFLASLPKEEQPKLAVKSVDSLMEKPHWMAQDKGAHFAGDVTQMHPLPSPYPPSGVNGHAHNLTTFEQKPHRPAGRSSLRAVRVKPARSNTQPATAPNTPPTSYPLLAESLSSSSSPPAPPSSAPPAPVTNFGIHHPPPLPPPTNNSDDEIVEVPYKPKTPEIIDLDEYPETDSPDSSKKKRLDILKERGLEVTPLPTPWPAPITPVLTPNPILLNPAVQQQIIASQLYGYYTPPVVPAAYPNGVQPPKVIQATSIFGSSSPEKTVYGNPKDPFMPPPHVLHGAPIKPHRVAVQPPSNPQDILDLTCKLTKPAVEIVRVPTAPSPKTATPKNYSIVDGKAVVGSNLEITLVNKAQSPKKDQNRPQKRSSNGKFLAKTPTKEQKVQKKQAIVVPSYQVRDDPSPTGSNNSTSSRESQKEQKPMSSFLDPYMALYSLAGQMDPRMMGGQLDPRQVAAYREAMVNQFRGYSHLLNMGVANPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-