Hbla001637.1
Basic Information
- Insect
- Hoplodrina blanda
- Gene Symbol
- Zfy1
- Assembly
- GCA_949316365.1
- Location
- OX438565.1:431249-435033[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.071 5 8.3 0.2 2 23 247 268 246 268 0.96 2 14 2.6 1.8e+02 3.4 3.3 6 23 280 298 280 298 0.94 3 14 0.034 2.4 9.4 0.1 2 23 310 332 309 332 0.93 4 14 7.8e-08 5.4e-06 27.1 1.0 2 23 355 376 355 376 0.97 5 14 2.7e-05 0.0019 19.1 2.0 1 23 382 405 382 405 0.98 6 14 0.005 0.35 12.0 0.1 1 23 411 433 411 433 0.97 7 14 2.5e-06 0.00017 22.4 2.1 1 23 439 461 439 461 0.98 8 14 0.031 2.1 9.5 2.8 1 23 585 607 585 607 0.95 9 14 0.00039 0.027 15.5 2.0 2 23 614 636 613 636 0.92 10 14 1.2e-06 8.2e-05 23.4 1.7 1 23 642 664 642 664 0.98 11 14 1.2e-06 8.5e-05 23.3 4.4 1 23 670 692 670 692 0.98 12 14 0.00011 0.0078 17.2 0.2 1 23 698 720 698 720 0.98 13 14 0.0076 0.53 11.4 1.5 1 23 726 748 726 748 0.93 14 14 0.0012 0.081 14.0 0.4 1 23 754 777 754 777 0.93
Sequence Information
- Coding Sequence
- ATGAATAATGAAACagaacaattatttttactaaatgcagcCCCAAATCAGGCTTCGACCTCCACTCAAAAGATGGGCACCCTGGCACTGCCGCCCAGCTCACAAGTTAATCTTGAAGATGTCAAAGATTTCTCGCATGTGTGTCggacatgcgccaccatcacaGAGTTTGTTATGCCCATATTTGCTGGAGAGGGGCTGCAGAACAACTTAGCCGATaagataaaaaaacacttaccaATACAGGTATGCGAGAGCGACGAGCTGCCCCTGGTGGTGTGCTACCAATGTGCAAGCACGCTGCTGGCATGGCACGAGCTGGTACAATGCTGTGTGCAGGCTGACGCAGCCCTGCGGGCCAAGCTCAGCTCCAACCAACGGaaaacAATTCCACCTAATGTTAACATTAAATCAAGCTCAAGCGTAAAAGAGGAAACACAGACCAAGTTGTTTTACACAAGTCTCAAAAGTGCTCTCATTGATTTTCATAAGGATCTGGAGGAAGATCACTTGGACGTAGAGTTTGTTTGCCAAAAGTGTGTTGAGAAGCCAGCACTGAGCACGGTGCACAGCCTCGCTGAACATATCACACAAGCCCACTCTCCTGACTTACTCGACAACAGTGTTAAAACATTCATCACCAACTACATTACCTTCGAACAAGTACTAGCTGAGGATTCTGACCGAGAAACACAATCAAACACTAAAGAGAAGTCACCAATAGTTCTGCCGAGTCTGTACTGTCCTTTCTGCGCGAGTGTGTTCTCGTCGGCCACGCGCCTGGTGTACCACTTGAACAAGCATGTGGAGGTGAGCGTGGCGGGCGGCGTCGTGTGCTGCCACCACGCCTACAGCGACAAGAAACACTTCGTGCAGCACCTGCAGGACGCTCACGTCAGCAAGACAGTGGACGAGCCAGCGCAGGTCCAGTGCGTCAGCTGTGGCTTTACCGCACCGCGCGCTGACCAGTTGAAACAGCATTACAAAGACGCACACGACGATGTCAAGAGTACGAAAGAGAAAAAAGTGGAGAGTCCCAACAACCAGAAGAACATCCCGGCGGTGTGCCCCGAGTGCAACAAGACGTTCTCCAACAAGTACAACATGTTCGCGCACATGCGCAGTCACACGCACGCCGCGGTGTACCCGTGCGACAAGTGCGCGCGCACCTACCGCCACCGAGGGAACCTCAACCAACACAGGAGGATGGCGCACCAAGGAATACTCAAGTTCATGTGTGTCGAGTGCGGCGAAGCGTTCCCCAGTCGGTCAGAGCGCGACGTGCACTCGCGCATACACTCGGGGGAGACCCCGTACAAGTGCCAGCACTGCGGCAAGGCGTACCGCGCCAAGAGCACGCTCACCCGGCATCTAGAGATACACTTAGACATACGGAAACACGAGTGCGGGATCTGCTCCAAGAAGAGCCCCTGCCACTTGTCCGAGGAGCCCCGCAGCGATCTGTCCGAGCTGTCCGATGACGAGCCGCTGGCTATGGTCGCCACTAGAAAGCCCGCAAAACTCTATACCGATTTCTACAGAGCACTCGTCAATTTTAGAAATCATTTTGTTAATGATCAACATCATGAGGATTATCCTGAGTTTTCCGACTCTAGTATGTCTGACGCTGACGAGAACGACGTGGACAGGTTCGACGACCTGACGCAGTCCAACATGCGGAGAGACAGGCTGGACGACGAGACGAGGCTAGAGCTGAGAGAAGTGCAGAACAAAATCGACAATAAGACGTACTACACTTGCAAGATATGCGGCAAGAACCTGAGCTCTGCGCACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGGCTGCAGCGGCACCTCACGGAGACGCACGAGCGCGTCCGACGATATAACTGCACTCTTTGCACTAAAACCTTCGCCAACTCACAGAATCTCAAGCAACACCTACGGATACATACAGGAGAAAAGCCATTCGTGTGTTCTCATTGCGGGAAGAGGTTCACTCAGAGCGGCTCGCTGCACGTGCACCTGAAGACTCACAGCGAACAGTTTCCTTACGAGTGCGCGGAGTGCGGAGCTAAGTTTAGACTGCGCTCGGGGCTGGTGCGGCACCGACTGCGCCACACGGGCGAGCGCCCGCACGTGTGCGCCACTTGCGGCCAGGGCTTCCGCCAGCGCCACGAGCTCGGCGCGCACGCGCATGCGCACTcgggcgccgcgccgcacgCCTGCGCCGCCTGCCCGCGCGCCTTCCGCCAGCGCCGCGCGCTGCGCCTGCACGTGCGGCGAGCGCACCCCTGCTAG
- Protein Sequence
- MNNETEQLFLLNAAPNQASTSTQKMGTLALPPSSQVNLEDVKDFSHVCRTCATITEFVMPIFAGEGLQNNLADKIKKHLPIQVCESDELPLVVCYQCASTLLAWHELVQCCVQADAALRAKLSSNQRKTIPPNVNIKSSSSVKEETQTKLFYTSLKSALIDFHKDLEEDHLDVEFVCQKCVEKPALSTVHSLAEHITQAHSPDLLDNSVKTFITNYITFEQVLAEDSDRETQSNTKEKSPIVLPSLYCPFCASVFSSATRLVYHLNKHVEVSVAGGVVCCHHAYSDKKHFVQHLQDAHVSKTVDEPAQVQCVSCGFTAPRADQLKQHYKDAHDDVKSTKEKKVESPNNQKNIPAVCPECNKTFSNKYNMFAHMRSHTHAAVYPCDKCARTYRHRGNLNQHRRMAHQGILKFMCVECGEAFPSRSERDVHSRIHSGETPYKCQHCGKAYRAKSTLTRHLEIHLDIRKHECGICSKKSPCHLSEEPRSDLSELSDDEPLAMVATRKPAKLYTDFYRALVNFRNHFVNDQHHEDYPEFSDSSMSDADENDVDRFDDLTQSNMRRDRLDDETRLELREVQNKIDNKTYYTCKICGKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYNCTLCTKTFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLVRHRLRHTGERPHVCATCGQGFRQRHELGAHAHAHSGAAPHACAACPRAFRQRRALRLHVRRAHPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00273832;
- 90% Identity
- iTF_00809413;
- 80% Identity
- -