Basic Information

Insect: Hoplodrina blanda
Gene Symbol: -
Assembly: GCA_949316365.1
Location: OX438587.1:11201278-11212884[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.2e-05 0.0057 17.6 2.2 1 23 299 321 299 321 0.97

2 20 0.0043 0.3 12.2 0.6 1 20 327 346 327 349 0.94

3 20 2.1e-05 0.0015 19.4 5.6 1 23 368 390 368 390 0.98

4 20 9.9e-05 0.0069 17.3 4.1 1 23 396 418 396 418 0.99

5 20 3.8e-05 0.0026 18.6 5.3 1 23 424 446 424 446 0.97

6 20 8.7e-06 0.0006 20.7 7.4 1 23 452 474 452 474 0.97

7 20 7.3e-07 5.1e-05 24.0 2.9 1 23 480 502 480 502 0.97

8 20 0.0001 0.0072 17.3 6.7 1 23 508 530 508 530 0.97

9 20 0.0001 0.0072 17.3 6.5 1 23 536 558 536 558 0.97

10 20 5e-07 3.5e-05 24.6 1.9 1 23 564 586 564 586 0.98

11 20 9.8e-06 0.00069 20.5 7.7 1 23 592 614 592 614 0.98

12 20 2.6e-05 0.0018 19.2 6.6 1 23 620 642 620 642 0.98

13 20 1.8e-05 0.0013 19.7 4.0 1 23 648 670 648 670 0.98

14 20 6.8e-06 0.00047 21.0 5.0 1 23 676 698 676 698 0.96

15 20 1.1e-05 0.00078 20.3 5.2 1 23 704 726 704 726 0.98

16 20 2.5e-05 0.0018 19.2 6.1 1 23 732 754 732 754 0.98

17 20 6e-05 0.0042 18.0 7.9 1 23 760 782 760 782 0.97

18 20 2.5e-05 0.0017 19.2 7.7 1 23 788 810 788 810 0.98

19 20 0.00074 0.052 14.6 0.3 1 23 817 839 817 839 0.96

20 20 0.32 22 6.3 4.9 1 23 851 873 851 873 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.2e-05	0.0057	17.6	2.2	1	23	299	321	299	321	0.97
2	20	0.0043	0.3	12.2	0.6	1	20	327	346	327	349	0.94
3	20	2.1e-05	0.0015	19.4	5.6	1	23	368	390	368	390	0.98
4	20	9.9e-05	0.0069	17.3	4.1	1	23	396	418	396	418	0.99
5	20	3.8e-05	0.0026	18.6	5.3	1	23	424	446	424	446	0.97
6	20	8.7e-06	0.0006	20.7	7.4	1	23	452	474	452	474	0.97
7	20	7.3e-07	5.1e-05	24.0	2.9	1	23	480	502	480	502	0.97
8	20	0.0001	0.0072	17.3	6.7	1	23	508	530	508	530	0.97
9	20	0.0001	0.0072	17.3	6.5	1	23	536	558	536	558	0.97
10	20	5e-07	3.5e-05	24.6	1.9	1	23	564	586	564	586	0.98
11	20	9.8e-06	0.00069	20.5	7.7	1	23	592	614	592	614	0.98
12	20	2.6e-05	0.0018	19.2	6.6	1	23	620	642	620	642	0.98
13	20	1.8e-05	0.0013	19.7	4.0	1	23	648	670	648	670	0.98
14	20	6.8e-06	0.00047	21.0	5.0	1	23	676	698	676	698	0.96
15	20	1.1e-05	0.00078	20.3	5.2	1	23	704	726	704	726	0.98
16	20	2.5e-05	0.0018	19.2	6.1	1	23	732	754	732	754	0.98
17	20	6e-05	0.0042	18.0	7.9	1	23	760	782	760	782	0.97
18	20	2.5e-05	0.0017	19.2	7.7	1	23	788	810	788	810	0.98
19	20	0.00074	0.052	14.6	0.3	1	23	817	839	817	839	0.96
20	20	0.32	22	6.3	4.9	1	23	851	873	851	873	0.99

Sequence Information

Coding Sequence: ATGTACGTTCTTCAAGTTTTCTTCACTGTAGCACTATCTTCAGAAGCACTTGTGGCCCATAGTCAGCAGCAAGCTGAACTGGCTGCTGCCCAGGGCTCTGCCAACAATGCCCAGGTGTCAGTTAGTGCTGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACATGGGACACCATTCACAACAACACATAATGCAGCAACAACTGATGGCGCAGGCGCGTCCTGAACACAGCAACCAACAGATTCAACTAACAGTCAGCGAGGACGGCATAGTGACAGTCGTGGAGCCAGCTGGTAATAAAATGGTGGATAAGGAGGAACTTCATGAAGCCATCAAGATGCCCAACGACCATACCCTCACTGTGCATCAGCTACAGCAAATAGTGGGACAACAGGTAATAGACAGCGTTGTACGGATAGAACAAGCGACCGGTGAGCCGGCGAACATCCTTGTGACTCATAATCCTGACGGTACGACCTCCATAGAAGCCAGTGCAGCTGACCCTCTGATTGTCAAGGACGAGAAGAATCCTAACAAAATAGAGACTGCACAGTTCGCTATACCTACTGAGATAAAGGATATAAAGGGAATTGATTTGAAGAGTGTAGGAGCAATGGGCATGGAAGGTGCTGTAGTAAAGATCTCAGCCGGTGCGTCAGAACACGACCTCCACGCGATGTATAAAGTCAACGTGGAAGATCTGTCACAATTGCTTGCTTACCATGAGGTGTTCGGAAAACTTAATTCGGAAGGCCAGCAGCAACAAGCAAAGGCAATAAACGATGTGGATGTCGAAGTTGAAGCAGGCACCAGCGCAGCTATGTCAGAAGCCGAATCCCCACCCGGCCACCACTCATGCGATATTTGCGGGAAAATATTCCAGTTCCGATACCAACTTATTGTTCatagACGTTATCATGGCGAAAGTAAACCATTCACGTGTCAAGTATGTGGTTCCGCATTTGCAAATCCTGTCGAATTGTCGAGGCATGGAAAATGTCATCTTGCTGGAGATCCGAATGAAAGACACGCCAAGAGGATGGCGCAAGATAAGCCGTACGCTTGCACCACTTGCCACAAAACTTTCTCTCGTAAAGAACATTTGGACAATCACGTCCGAAGCCATACTGGAGAAACTCCTTACAgATGCGAGTTTTGCGCGAAGACTTTCACCCGCAAGGAGCACATGGTCAACCACGTACGAAAACATACGGGTGAAACTCCGCATCGTTGTGATATTTGCAAGAAGAGTTTCACCAGGAAAGAACACTTCATGAACCACGTTATGTGGCACACAGGTGAAACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCTTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACTCCGCACCGCTGCGACTTCTGTTCAAAAACATTTACCCGCAAGGAGCATCTCCTCAACCACGTCCGCCAGCATACGGGCGAATCTCCTCACCGCTGCAACTTCTGCAGCAAATCGTTCACGCGTCGAGAACACCTCGTCAATCACGTGCGCCAACACACCGGGGAAACACCCTTCCAGTGCGGATACTGTCCTAAAGCCTTCACTAGGAAGGACCATCTCGTGAACCACGTTCGTCAGCATACAGGCGAATCCCCACACAAATGTTCGTACTGCACAAAATCGTTCACTCGCAAGGAGCATTTGACGAATCATGTGCGACAACACACGGGCGAGTCTCCGCACCGCTGTACTTACTGCGCCAAGTCCTTCACGAGGAAGGAACACCTCACCAACCACGTTAGACAGCACACGGGAGAAACACCACACAAGTGTGCGTACTGCCCGCGAGCGTTCGCGCGCAAGGAGCACCTCAACAACCACACGCGACAGCATACCGGCGTCACACCGCACGCCTGCTCCTACTGCAGCAAGAGTTTCACTAGAAAAGAACACCTCGTTAATCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTTCTGTTCAAAGTCGTTCTCTCGTAAGGAGCACCTCACAAACCACGTGAACCTTCACACAGGACAGACGCCTCACAAATGTGCTTTCTGCACAAAAACATTTTCCAGGAAAGAACATTTGACCAATCATGTCAgGATTCACACGGGCGAGTCTCCGCACCGCTGCGACTTCTGCCAGAAGACGTTTACGCGGAAGGAGCACTTGACTAATCATCTGAAGCAACATACCGGCGACACCGCACACGTCTGCAAGGTCTGCTCGAAGCACTTCACCAGGAAAGAACATCTCGTGACGCACATGAGATCGCACAGTTGCGGCGAGCGTCCATTCAGTTGCGGCGAATGCGGCAAATCTTTCCCGTTGAAAGGCAACCTACTATTTCATGAACGATCGCACAACAAAAACAATGCTAATGCTGCCAATAAGCCGTACCGATGTGAAGTCTGCTCCAAGGAATTCCTCTGTAAAGGCCATTTGGTATCTCATCGACGCACACACGCAGAATGGACGGAAGGTGCTGCGCCCGGCGAAACACCAGCTGAAACAGAAGACTGTACTGATAATAAGTGTATCAAAGTTGAGCCAGATCGAACTGAGAGGAAACATGAAGTCAGGACGACAGTCGAAACGAGACCAGTTGAGAGCAATGTCGCACAAACTCAACCAAACACACCTACTGTGATGATAACCAATAATCAACAAGTTCGCGCAGCAAGCGTGAGCGCGGTGGGTGCGGTGAACGCAGTGGGCGCGGTGAGCTCGGGCGGCGCGGGGGTGGCTGGGGTAGCGGGCGTGACGGGTGTGGCGGCCACGTTCGCTCACAGCGTGGCCGCGCAGCACCACGCTGGCGCCAACATCGCGCACCACCCCGTCACCGTTAACTACTAG
Protein Sequence: MYVLQVFFTVALSSEALVAHSQQQAELAAAQGSANNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMVNHMGHHSQQHIMQQQLMAQARPEHSNQQIQLTVSEDGIVTVVEPAGNKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKNPNKIETAQFAIPTEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQAKAINDVDVEVEAGTSAAMSEAESPPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCAYCPRAFARKEHLNNHTRQHTGVTPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGQTPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANAANKPYRCEVCSKEFLCKGHLVSHRRTHAEWTEGAAPGETPAETEDCTDNKCIKVEPDRTERKHEVRTTVETRPVESNVAQTQPNTPTVMITNNQQVRAASVSAVGAVNAVGAVSSGGAGVAGVAGVTGVAATFAHSVAAQHHAGANIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -