Hbla007332.1
Basic Information
- Insect
- Hoplodrina blanda
- Gene Symbol
- -
- Assembly
- GCA_949316365.1
- Location
- OX438574.1:1038466-1040544[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.047 52 4.5 0.1 14 28 80 94 75 96 0.83 2 7 0.00014 0.16 12.6 1.9 5 38 100 133 98 135 0.95 3 7 1.4 1.5e+03 -0.2 1.3 17 29 172 184 160 196 0.76 4 7 0.052 58 4.4 0.1 19 39 230 247 228 251 0.73 5 7 0.031 35 5.1 5.4 8 40 248 276 242 284 0.79 6 7 0.0012 1.4 9.6 2.2 6 41 274 305 272 307 0.86 7 7 0.0018 2 9.0 2.0 14 44 309 336 304 336 0.86
Sequence Information
- Coding Sequence
- atgtttttttttcgtcatTTCAGTATAGAGAATGATGGAACACAGCCTCCGCCCTCTCCCGACAGTTCTGGGTCTGGAAGCGGCACCTGGCTGGTTCCTATCAAGCAGGAGATTCTCCCTGAAGATTACCTCCAGGTTACTATCAAGCAGGAAGATGATGAGGACCCAGCGTCAGATGACCCGGCAGCCGAACAAGCCATTTCATCTTCTGAAGACCGTTGTGAAGGCCAAACACCATCTAGTAGTTTAAAATGCGAGATTTGTAACAGAACTTTCACAAATTTAAAAGACCTTGAAAAACACTTTCAAAGCCATGCCAAAACAAGGCTTCAATGCGACCATTGCCCAGCAAATTTCAATACAAAACTTCTCCTAAAAACCCACATGTTAAAAAACCACAGCGAAAACTTTGAAGGGAAGAAACCTCACCAGTGTCCCAATTGTCCTCTAAAATTCCCGTTCGCAATTAGCTTGGAAAAGCACAAAGAACATTGTAATCCCACGGACAGTCCATACACATGTGACGTTTGTAATAAAAGGTTTGAAAAAAGGCATTTGTATAACTCTCATTTGCAAATGCATAACACAGAACGGCCGTTTGCTTGCGATGAGTGTCCGTTGAGCTTCAAGTACAAAAGTACTCTTGTACGCCACGGACATGTTCATACCAGAATCAGACCGTATGGGTGTCCTTACTGCGACAAAACATTCACCAGTTCTGGATTACTAAAGCCGCATTTGAGAAAACATACAGGCGAAAAACCTTTCACTTGCGAACTTTGCAATAAGAAGTTTGCACATAAACACAATATGCAGAGACATTTTGTGAGCCACGAGAAAGTCAAGCACACTGTCTGCGATATATGTCACAGAGAGTTTCCGCGAGAGAGTAGGTTGAAGTACCACATGAAAACACATGTTAATGAGAAATTTTTCGTGTGTAAATTTTGTCCTAAAAGATTTTCTCATAAGCAGAATGTTCAGAGGCACTATATGAGGAAACATCCAGGTAAAACTTATGAAGGTAAAGAGACGGACGCGTCAGTCGCAGCCAAGATCTGGGATACGATGAAGAAGAGGATCTGCGATGAGGAGTCTGAAGAAATTTTGGGTTGA
- Protein Sequence
- MFFFRHFSIENDGTQPPPSPDSSGSGSGTWLVPIKQEILPEDYLQVTIKQEDDEDPASDDPAAEQAISSSEDRCEGQTPSSSLKCEICNRTFTNLKDLEKHFQSHAKTRLQCDHCPANFNTKLLLKTHMLKNHSENFEGKKPHQCPNCPLKFPFAISLEKHKEHCNPTDSPYTCDVCNKRFEKRHLYNSHLQMHNTERPFACDECPLSFKYKSTLVRHGHVHTRIRPYGCPYCDKTFTSSGLLKPHLRKHTGEKPFTCELCNKKFAHKHNMQRHFVSHEKVKHTVCDICHREFPRESRLKYHMKTHVNEKFFVCKFCPKRFSHKQNVQRHYMRKHPGKTYEGKETDASVAAKIWDTMKKRICDEESEEILG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00809426;
- 90% Identity
- iTF_00809426;
- 80% Identity
- iTF_00810352;