Basic Information

Gene Symbol
-
Assembly
GCA_949316365.1
Location
OX438569.1:7169507-7171987[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.1 2.7e+03 -0.9 0.0 4 19 169 184 167 199 0.87
2 5 4.4e-09 3.9e-06 27.4 0.1 1 45 273 319 273 320 0.95
3 5 1e-07 9.2e-05 23.0 0.1 2 44 327 373 326 375 0.95
4 5 3.2e-12 2.9e-09 37.5 0.0 1 43 379 421 379 423 0.97
5 5 6.1e-05 0.054 14.2 0.0 3 46 431 476 429 476 0.93

Sequence Information

Coding Sequence
ATGGATATTGACGATATGGACCTTAGTTTTGAGACTGACTCAGAAGTCGACACTGATGATGAAACACTGTGCGGAAACGGAAACAAGCAGCCGCTAACTGGGCTGAAGATAGATGATGAGACGTTCAGCGAAAGAATGTCGCAACGCCTCTCTTCCCTCCACCACACAATGAGCCACAGAACGCACAGTCGGTTTGAACGAAGTGAAATTTCCACAGAACAAACCCAAATAGATTTAGCTTTGTCGGCAAACAAAATACTAGACGAAAAGATGAAGAGACTAGAGAGAGATCTTGCCTCCCGTTTAAATGAGTGTCGGGAGAAATTGAGAGTGGTTCAAGGTAACGCTGGCATGTCAACTGACAAAAGTGAAATTTTCCGCTATATCAGCTGTGGTAGACCTTATTTTAAGGATAAACAGGGATTTACTGCTCCAGATAATGATGATGCTAAAATGGCAAAATCTCAGATGTATGACTTCTCCTTAGTCATATCAGTACCGGGCTGGACAGTGAGAGACAAGTCTCAATTTATAAATATGATCCACAAAATGtcaaaagatattaaaaaaaatgaactgCATGCAAAAATTGCTAACTTAAAACGCAAAAGTAAttcaaagaacagaaaagtGGAAAGAGAAATAATGGCCATTAGAAAggaaattgataaaataaatactttgccTTTGAGTGATGTAGCTCTTCCAATAGACGAGGAGTATGATTGGGACAtgttaacaaacaaattaaacagGAGGCATACGGCACAGGAGTATCAATCACTCTGGAAGTTATTCTTTCATCCTTCAATTAACAAAAATAGTTGGAGCAAAGCCGAGCACACTTCATTACAGAAAATTGCTTGCCAGAACGGTCAACAAGATTGGGATGAAATTGCTCTCAAACTAAATACTGGCAGAACTGGGTATCAGTGTTTTGTATACTATCGGACAAATATGACCAACTCTTTTACTGGGAAGAAATGGACcaatgaagagataacataccTGAAAAGATTAATAGAATATTTCAAAGAAGACTTTTACATTCCATGGGGTAAGATAGCTGCAGCAATGGAAAACCGAAcaaaaattcaaatctataataAGTATATGAGACTTATTGAACAAAGGAAAGGCAGGTTCCTCCCTGAGGAAGACGCTGTTATCCTCAACTGTGTGGAAAGATTTGGAACTAACTTTAGGAGGATGGCTAATTATTTACCTGGCCGCTCTATGGTCCAGATACGTGCCAGATATCAAGTCTTGAGTAAAATGAGAGTGTCAACTGTATGGACTGTTGAAGATGATAAGAAACTCATACAATTGATGAGCAACCAAGAGTCAAGCATGAATTTTTCCACAGCTACACAATTTTTTCCAGGAAGAAACAGAACAAAAATTAGGACTAGATATATTACCCTACTGAGATGGATGAAAAAACATCCCAACTTAGATTTGGAACATGCACCACGACGAGGAGCACGGCGTTTGAATCATGGGCAAGCCAGTGGCACCCTGAATGATGCAGTggagaatttaaaaaattctttgatAACAACAGTGCAACAAAGGGCTAAGAGAACAAAGATTACTGAACAGTCTACACACAAAGAATTAAATGATGCCATTGTTGTACTTCTTGTAAATTCTATATTAAAAGAAAGAGAAGCAGAATCAAAGAAGGCTCCTCCAGAAGAACATTTAGTTATAGGCCCTGACCATGTTGTCTCATATGCTGACTTGAATATTACTAACCTgcgaaaaaacataatatttttaaatgctcgTCTAGATAAGCCTAGTTACATGAACAGCCACTACAGAGAAGATTATCCGACTTTAGGAGATAGTAGTCATGATGTTTCTCTAGTTAAAGTGAAGTCGTATTCCCGGAAGACCATCAACCAAACTATAATGGTTAGAGATACTCCTAATGTCTGGGGAACTCCTATGCTGAACGTTCAAGGTCTACGATTGCTAAATTTAAAAGAGCAAAGAAACTATGTGCTACCTCCACAGCTGGCAACTATAACGGGTACTAGAGCTATTATGGCATATGTGCTAGCAAACAGTCAATACACTGAATCTATAAATCTACACGTACTTTGCAGACGGAACATAATATTAAAGGAGCTTTTAGATCAAGTTCTTGaacgcttttatatattattcaCATGGCCGATGATCTTATCCAATGAAGGGCCTGTAGAAACTATTGAATCAAGTGTACCAAGAACAGATTCCGTTTTTGTTAGACCACCTACGTTGCCAACTGCGCCTGAAGTTacaattaatgtaaaatgtataaagaaatttaaaaatcaagATGTCACTGAAATTATAGATCTAGATGAAGAGGAGGCTAATCAGGTTGATATTGTTGTTGAGGAGAAAATAGATACTATTGATGagaagatagaaaaacatctTTGTGATGAATTATTGGATTTTAATCAATCAGATAATAATGTGGTTTAG
Protein Sequence
MDIDDMDLSFETDSEVDTDDETLCGNGNKQPLTGLKIDDETFSERMSQRLSSLHHTMSHRTHSRFERSEISTEQTQIDLALSANKILDEKMKRLERDLASRLNECREKLRVVQGNAGMSTDKSEIFRYISCGRPYFKDKQGFTAPDNDDAKMAKSQMYDFSLVISVPGWTVRDKSQFINMIHKMSKDIKKNELHAKIANLKRKSNSKNRKVEREIMAIRKEIDKINTLPLSDVALPIDEEYDWDMLTNKLNRRHTAQEYQSLWKLFFHPSINKNSWSKAEHTSLQKIACQNGQQDWDEIALKLNTGRTGYQCFVYYRTNMTNSFTGKKWTNEEITYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLPEEDAVILNCVERFGTNFRRMANYLPGRSMVQIRARYQVLSKMRVSTVWTVEDDKKLIQLMSNQESSMNFSTATQFFPGRNRTKIRTRYITLLRWMKKHPNLDLEHAPRRGARRLNHGQASGTLNDAVENLKNSLITTVQQRAKRTKITEQSTHKELNDAIVVLLVNSILKEREAESKKAPPEEHLVIGPDHVVSYADLNITNLRKNIIFLNARLDKPSYMNSHYREDYPTLGDSSHDVSLVKVKSYSRKTINQTIMVRDTPNVWGTPMLNVQGLRLLNLKEQRNYVLPPQLATITGTRAIMAYVLANSQYTESINLHVLCRRNIILKELLDQVLERFYILFTWPMILSNEGPVETIESSVPRTDSVFVRPPTLPTAPEVTINVKCIKKFKNQDVTEIIDLDEEEANQVDIVVEEKIDTIDEKIEKHLCDELLDFNQSDNNVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00274376;
90% Identity
iTF_00809067;
80% Identity
-